Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30449
(301 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181; Eukary... 156 8e-38
UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeb... 91 3e-18
UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5... 85 3e-16
UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2; Methano... 66 1e-10
UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2; Sulfolo... 65 3e-10
UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n... 65 3e-10
UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5; Archaea... 63 1e-09
UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus M... 62 2e-09
UniRef50_A0RY02 Cluster: 30S ribosomal protein S4P; n=3; Thermop... 62 2e-09
UniRef50_A6MWA4 Cluster: Ribosomal subunit protein S9; n=3; Euth... 60 1e-08
UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultu... 58 4e-08
UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3; Halobac... 56 1e-07
UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5; Thermop... 56 2e-07
UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12; Archae... 56 2e-07
UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3; Methano... 54 5e-07
UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcu... 53 1e-06
UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1; Encephal... 50 8e-06
UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8; Euryarc... 49 2e-05
UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5; Archaea... 48 4e-05
UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella... 46 2e-04
UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1... 44 5e-04
UniRef50_Q8SRU8 Cluster: U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN; n... 44 9e-04
UniRef50_A5BYX8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.011
UniRef50_Q6CM19 Cluster: Similarity; n=2; Saccharomycetaceae|Rep... 38 0.044
UniRef50_Q4E3I1 Cluster: Putative uncharacterized protein; n=2; ... 37 0.10
UniRef50_Q54XG2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.18
UniRef50_Q7R0S4 Cluster: GLP_186_71509_70955; n=1; Giardia lambl... 34 0.54
UniRef50_Q23CK9 Cluster: Putative uncharacterized protein; n=1; ... 34 0.72
UniRef50_P32899 Cluster: U3 small nucleolar ribonucleoprotein pr... 33 0.95
UniRef50_A7K4V4 Cluster: Integrase; n=3; Vibrio|Rep: Integrase -... 32 2.9
UniRef50_A1VAB9 Cluster: DegT/DnrJ/EryC1/StrS aminotransferase; ... 32 2.9
UniRef50_A7M543 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_A0YKP8 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_Q4P328 Cluster: Helicase SWR1; n=1; Ustilago maydis|Rep... 31 3.8
UniRef50_Q2IEA1 Cluster: Mammalian cell entry related protein pr... 31 5.1
UniRef50_A4C1Y1 Cluster: Putative outer membrane protein; n=1; P... 31 5.1
UniRef50_A6RBE4 Cluster: Predicted protein; n=1; Ajellomyces cap... 31 5.1
UniRef50_A6TUV4 Cluster: Fumarate reductase/succinate dehydrogen... 31 6.7
UniRef50_A6C7H2 Cluster: RNA-directed DNA polymerase; n=1; Planc... 31 6.7
UniRef50_A0ZFS1 Cluster: WD-40 repeat protein; n=1; Nodularia sp... 31 6.7
UniRef50_Q0UYK5 Cluster: Predicted protein; n=1; Phaeosphaeria n... 30 8.9
>UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181;
Eukaryota|Rep: 40S ribosomal protein S9 - Homo sapiens
(Human)
Length = 194
Score = 156 bits (379), Expect = 8e-38
Identities = 73/85 (85%), Positives = 83/85 (97%)
Frame = +1
Query: 1 ARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLV 180
+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL+RRLV
Sbjct: 23 SRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLV 82
Query: 181 RIGVLDEKQMKLDXVLGLKIEDFLD 255
RIGVLDE +MKLD +LGLKIEDFL+
Sbjct: 83 RIGVLDEGKMKLDYILGLKIEDFLE 107
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 249 LGRRLQTQVFKAGLAKS 299
L RRLQTQVFK GLAKS
Sbjct: 106 LERRLQTQVFKLGLAKS 122
>UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeba
histolytica|Rep: 40S ribosomal protein S9 - Entamoeba
histolytica
Length = 185
Score = 91.5 bits (217), Expect = 3e-18
Identities = 46/97 (47%), Positives = 64/97 (65%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVR 183
R D ELK++G++GL+NK+E+ RV Y L +R A+ +L + KDPKRL EG AL+RRL
Sbjct: 23 RFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAKDPKRLLEGAALLRRLHN 82
Query: 184 IGVLDEKQMKLDXVLGLKIEDFLDVVCRRRCSKLAWR 294
+G+L Q KL+ VL LK E+ L+ RR L +R
Sbjct: 83 LGILPRDQNKLEFVLALKEENLLE----RRLQTLVYR 115
>UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5;
Oryza sativa|Rep: 40S ribosomal protein S9, putative -
Oryza sativa subsp. japonica (Rice)
Length = 157
Score = 85.0 bits (201), Expect = 3e-16
Identities = 47/88 (53%), Positives = 60/88 (68%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVR 183
R D ELK+ GEYGLR+K E+WRV+ ELLTL+EK+P+R+FEG AL+R + R
Sbjct: 25 RPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNPRRIFEGEALLRHMNR 73
Query: 184 IGVLDEKQMKLDXVLGLKIEDFLDVVCR 267
G+L E Q KLD VL L +E+FL CR
Sbjct: 74 YGLLGEGQNKLDYVLALTVENFLQ--CR 99
>UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2;
Methanomicrobiales|Rep: 30S ribosomal protein S4P -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 181
Score = 66.1 bits (154), Expect = 1e-10
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 ARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRL---FEGNALIR 171
+R+++E +++ EYGLRNKREVW K L + RKAARE++ L+ ++ + + LI
Sbjct: 21 SRIEEETRLVIEYGLRNKREVWIAKGALRKYRKAAREIIALQSTGSEQARVERKKDELIG 80
Query: 172 RLVRIGVLDEKQMKLDXVLGLKIEDFLD 255
L R G+L E +D VL LK+E LD
Sbjct: 81 SLQRSGMLSE-NADIDDVLALKVEQQLD 107
>UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2;
Sulfolobaceae|Rep: 30S ribosomal protein S4P -
Sulfolobus tokodaii
Length = 177
Score = 65.3 bits (152), Expect = 3e-10
Identities = 32/83 (38%), Positives = 52/83 (62%)
Frame = +1
Query: 7 LDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVRI 186
L++E +IG+YGLRNKRE+W + + + R AR LL L + R LI++L R+
Sbjct: 23 LEKEQVLIGKYGLRNKRELWLAQTIIRKFRHQARSLLALPPAE--RSTREKQLIQKLYRM 80
Query: 187 GVLDEKQMKLDXVLGLKIEDFLD 255
G++++ LD +LGL E++L+
Sbjct: 81 GIIEKDNATLDDILGLNEENYLE 103
>UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000501C59 UniRef100 entry -
Rattus norvegicus
Length = 199
Score = 64.9 bits (151), Expect = 3e-10
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +1
Query: 58 EVWRVKYTLARIRKAARELLTL-EEKDPKRLFEGNALIRRLVRIGVLDEKQMK 213
EVWRVK+TL +IRKA ELL L EKDP+ LFE N L+R+LV G+L E +MK
Sbjct: 41 EVWRVKFTLTKIRKAFWELLLLLNEKDPRYLFEDNLLLRQLVHTGLLGEGKMK 93
>UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5;
Archaea|Rep: 30S ribosomal protein S4P - Thermoplasma
volcanium
Length = 200
Score = 63.3 bits (147), Expect = 1e-09
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAREL-LTLEEKDPKRLFEGNALIRRLV 180
R+D+E KI+ +YGL+NKRE+WR + L+ IR AR L L D + +I+RL
Sbjct: 22 RIDEENKILVKYGLKNKREIWRSEAMLSSIRSQARYLRARLRASDANAQKQLERMIKRLS 81
Query: 181 RIGVLDEKQMKLDXVLGLKIEDFLD 255
R +L +K LD VL L +E+ LD
Sbjct: 82 RYKILSDK-ATLDDVLSLTVENILD 105
>UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S4 -
Methanoregula boonei (strain 6A8)
Length = 185
Score = 62.1 bits (144), Expect = 2e-09
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL-EEKDPKRLFEG--NALIRR 174
R+++E +++ EYGLRNKREVW+ + L + RKAARELL L + +FE + LI
Sbjct: 22 RIEEETRLVIEYGLRNKREVWKAQSHLRKYRKAARELLALMSSATNQTVFEAKKSELISH 81
Query: 175 LVRIGVLDEKQMKLDXVLGLKIEDFLDVVCRRRCSKLAWR 294
+ R G+L +D VL LK+ L+ RR L +R
Sbjct: 82 MQRAGLLG-PDADIDNVLALKVPAQLE----RRLQTLVYR 116
>UniRef50_A0RY02 Cluster: 30S ribosomal protein S4P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S4P -
Cenarchaeum symbiosum
Length = 205
Score = 62.1 bits (144), Expect = 2e-09
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = +1
Query: 13 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVRIGV 192
+EL+ +G +GLR KRE+W+ L+R+R AR LL L ++ +R + L+R L RIG+
Sbjct: 25 EELRTLGTFGLRTKRELWKAHTELSRVRNQARSLLALGQEVRER--KEPVLLRSLARIGL 82
Query: 193 LDEKQMKLDXVLGLKIEDFL 252
+ K LD VL L++ D L
Sbjct: 83 VG-KDASLDDVLNLQVNDLL 101
>UniRef50_A6MWA4 Cluster: Ribosomal subunit protein S9; n=3;
Eutheria|Rep: Ribosomal subunit protein S9 - Trichechus
manatus latirostris
Length = 30
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = +1
Query: 61 VWRVKYTLARIRKAARELLTLEEKDPKRLF 150
VWRVK+TLA+IRKAARELLTL+EKDP+RLF
Sbjct: 1 VWRVKFTLAKIRKAARELLTLDEKDPRRLF 30
>UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultured
methanogenic archaeon RC-I|Rep: 30S ribosomal protein
S4P - Uncultured methanogenic archaeon RC-I
Length = 205
Score = 58.0 bits (134), Expect = 4e-08
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 ARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE-----KDPKRLFEGNAL 165
AR+D+E ++ +YGLRNK+ VW+ L + R AR LL + +D + + +
Sbjct: 21 ARIDEETSLVKKYGLRNKKSVWKHASDLRKYRSNARALLGVMSAGNLPEDSHYIRDAQNI 80
Query: 166 IRRLVRIGVLDEKQMKLDXVLGLKIEDFLD 255
+++L +G+L E KL+ VL LK++D ++
Sbjct: 81 VKKLQTLGILKE-DAKLEDVLALKVDDIME 109
>UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S4P -
Halobacterium salinarium (Halobacterium halobium)
Length = 170
Score = 56.4 bits (130), Expect = 1e-07
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVR 183
R+ +E ++ YGL+NK E+WR + L R+ AR LL G + RL R
Sbjct: 22 RIAEESDLLSRYGLKNKEELWRAQSELRDYRREARRLL-----GQTGTVSGEEFVARLQR 76
Query: 184 IGVLDEKQMKLDXVLGLKIEDFLD 255
IG+L E++ +LD VL L++ D L+
Sbjct: 77 IGILSEEE-RLDDVLSLEVTDVLE 99
>UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S4P -
Pyrobaculum aerophilum
Length = 159
Score = 56.0 bits (129), Expect = 2e-07
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELL--TLEEKDPKRLFEGNALIRRLVRI 186
+EL+++GEYGLRNK+E+W + L I + AR LL T EE+ P + +L ++
Sbjct: 27 EELQLMGEYGLRNKKELWLARARLKWITRRARSLLSMTAEERAPLEM----PFKEKLYKM 82
Query: 187 GVLDEKQMKLDXVLGLKIEDFLD 255
G +++ ++LD +L L + L+
Sbjct: 83 GFIEDPNVQLDRILSLDVRAILE 105
>UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12;
Archaea|Rep: 30S ribosomal protein S4P - Methanococcus
jannaschii
Length = 187
Score = 56.0 bits (129), Expect = 2e-07
Identities = 33/97 (34%), Positives = 54/97 (55%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVR 183
R+++E ++ +YGLR KREVW+ + L + R+ AR L++ ++ + E L L +
Sbjct: 23 RIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLIS--DRTEQGAKEAVQLFNVLKK 80
Query: 184 IGVLDEKQMKLDXVLGLKIEDFLDVVCRRRCSKLAWR 294
G+L + LD VL L +ED L+ RR L +R
Sbjct: 81 YGILKIENPTLDDVLSLTVEDILE----RRLQTLVFR 113
>UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 182
Score = 54.4 bits (125), Expect = 5e-07
Identities = 32/97 (32%), Positives = 55/97 (56%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVR 183
R+ +E ++ +YGL+NK+E+W+ + + R R+ AR +L ++ + R + L+ LVR
Sbjct: 22 RIKEENRLANKYGLKNKKEIWKAESRVKRYRRDARIILGMDIDE--RADKEKELLDHLVR 79
Query: 184 IGVLDEKQMKLDXVLGLKIEDFLDVVCRRRCSKLAWR 294
G + KL+ VL L +ED L RRR L ++
Sbjct: 80 AGFI-SPNAKLEEVLDLNVEDIL----RRRLQSLVFK 111
>UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcus
aeolicus Nankai-3|Rep: Ribosomal protein S4 -
Methanococcus aeolicus Nankai-3
Length = 177
Score = 52.8 bits (121), Expect = 1e-06
Identities = 32/97 (32%), Positives = 53/97 (54%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVR 183
R+ QE ++ +YGL NK+E+W+++ L R+ AR+L++ ++ E L L R
Sbjct: 22 RIKQERELSNKYGLSNKKEIWKMETRLRTFRRQARKLISDTSAQGEK--EAVQLFGILNR 79
Query: 184 IGVLDEKQMKLDXVLGLKIEDFLDVVCRRRCSKLAWR 294
G+L ++ LD VL L +E L+ RR L +R
Sbjct: 80 YGILLKEDATLDDVLSLNLESILE----RRLQTLVFR 112
>UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S9 -
Encephalitozoon cuniculi
Length = 184
Score = 50.4 bits (115), Expect = 8e-06
Identities = 32/93 (34%), Positives = 58/93 (62%), Gaps = 9/93 (9%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRL-FEGNALIRRLV 180
RL +E +++G YGL+NK E+W ++ A+ ++ AR LLT +P+ + G +L+RRL+
Sbjct: 21 RLIREAQLVGVYGLKNKHELWVMEKIFAKDKERARILLT--STNPEDIPINGRSLLRRLM 78
Query: 181 RIGVL------DEKQM--KLDXVLGLKIEDFLD 255
+ G+L D++++ L+ VL L I +L+
Sbjct: 79 KYGILGGIDLCDKQEVVNGLNKVLDLTINHYLE 111
>UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S4P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 219
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = +1
Query: 1 ARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL-------EEKDPKRLFEGN 159
AR+ E++++ YGLRNK+EVW+ L R AR+LL E + +
Sbjct: 21 ARMAAEVQLVKAYGLRNKKEVWKAASMLRMYRSEARKLLAQVASGGQEGELEGHYATQSE 80
Query: 160 ALIRRLVRIGVLDEKQMKLDXVLGLKIEDFLD 255
++ +L+R G++ + +D +L LK E+ L+
Sbjct: 81 EILSKLIRYGII-KADANVDDILSLKTENILE 111
>UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5;
Archaea|Rep: 30S ribosomal protein S4P - Nanoarchaeum
equitans
Length = 180
Score = 48.0 bits (109), Expect = 4e-05
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLF-EGNALIRRLV 180
RL E +++ EYGL+NKRE+W + T+AR +A L ++ + + E + +L
Sbjct: 19 RLIIEKRLMKEYGLKNKRELW-IAETIARKWRAYARYLNAKQAAGQDISEEKERFLTKLK 77
Query: 181 RIGVLDEKQMKLDXVLGLKIEDFLD 255
++GVL E +LD VL L ++D L+
Sbjct: 78 KLGVLSE-NAELDDVLDLTVKDVLE 101
>UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella
natans|Rep: Ribosomal protein S9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 180
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/83 (25%), Positives = 46/83 (55%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVR 183
RL E+++I +GL+NKRE+WR ++ L+++RK A +L+ + K K + ++ +
Sbjct: 25 RLCNEIRMINLFGLKNKRELWRTQFFLSKLRKVAEKLIYKKAKLEKIPSQSYGILWFCYK 84
Query: 184 IGVLDEKQMKLDXVLGLKIEDFL 252
++ L+ ++ + + L
Sbjct: 85 YNFMNNMTFCLESIIKIDLRSIL 107
>UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1;
uncultured euryarchaeote ARMAN-2|Rep: Ribosomal protein
small subunit S9 - uncultured euryarchaeote ARMAN-2
Length = 187
Score = 44.4 bits (100), Expect = 5e-04
Identities = 27/85 (31%), Positives = 45/85 (52%)
Frame = +1
Query: 1 ARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLV 180
AR+ + +I EYGL N E+W+V+ ++R+R R LL+ + +I R+V
Sbjct: 21 ARIKADNALIAEYGLANMHELWKVQSEISRLRGNVRVLLSGSSSHD----TSDKIIARMV 76
Query: 181 RIGVLDEKQMKLDXVLGLKIEDFLD 255
+ G+L E L+ VL + FL+
Sbjct: 77 KFGIL-ENGATLEKVLDITPNAFLE 100
>UniRef50_Q8SRU8 Cluster: U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN; n=1;
Encephalitozoon cuniculi|Rep: U3 SMALL NUCLEOLAR
RIBONUCLEOPROTEIN - Encephalitozoon cuniculi
Length = 180
Score = 43.6 bits (98), Expect = 9e-04
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +1
Query: 28 IGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVRIGVLDEKQ 207
I +YGLR++ E + + ++RK A L L+E DP R L+ RL +GV+ ++
Sbjct: 32 IAKYGLRDREEYTKYSRIVGKVRKLAEALARLKESDPVRTTITKKLVGRLYSVGVIKNRK 91
Query: 208 M 210
+
Sbjct: 92 L 92
>UniRef50_A5BYX8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 187
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 7 LDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 117
LD ELK IG Y LR KRE+W V+ +LA ++K L+
Sbjct: 135 LDAELKFIGGYELRCKRELWSVQMSLAALQKYFSSLM 171
>UniRef50_Q6CM19 Cluster: Similarity; n=2; Saccharomycetaceae|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 246
Score = 37.9 bits (84), Expect = 0.044
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = -2
Query: 252 QEVLNLQTKHXIEFHLFFIQYSNTNQTTYKGITFEQXXXXXXXXXXXXXXXXXXXXERVF 73
QE+ NLQ++ I+ L F Q +N++Q++ + ITFEQ +
Sbjct: 87 QEIFNLQSQDIIQLLLVFRQDTNSHQSSDQSITFEQSLWVLFVSGQQISGGSSDLRQLER 146
Query: 72 DAPYFTLVAETVLSDDLQLLVK 7
++ F+LV +TV + LQ V+
Sbjct: 147 NSVNFSLVLQTVFTSQLQFGVQ 168
>UniRef50_Q4E3I1 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 406
Score = 36.7 bits (81), Expect = 0.10
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 52 KREVWRVKYT-LARIRKAARELLTLEEKDPKRLFEGNALIRRLVRIGVLDEKQMKLDXVL 228
KR +W + T L +R R + EE DP G +++R + G K+ ++ +
Sbjct: 197 KRRMWYTEVTDLESVRDLLRSTIVEEEHDP-----GWSVLRTIAGRGRTMPKRFRVSVSV 251
Query: 229 GLKIEDFLDVVCRRRCSKLAWR 294
++ +D ++ RR+ SKL W+
Sbjct: 252 CMQTDDMAELSARRQMSKLRWK 273
>UniRef50_Q54XG2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 177
Score = 35.9 bits (79), Expect = 0.18
Identities = 18/65 (27%), Positives = 36/65 (55%)
Frame = +1
Query: 13 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVRIGV 192
++++ IG +GL+ K E +A+ + +E+ L ++DP + + L +L +GV
Sbjct: 29 KDVENIGRFGLKGKEEYAEYTKLVAQYKHVLKEISDLSDQDPVKQKLLSDLSEKLYNMGV 88
Query: 193 LDEKQ 207
+D KQ
Sbjct: 89 IDLKQ 93
>UniRef50_Q7R0S4 Cluster: GLP_186_71509_70955; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_186_71509_70955 - Giardia lamblia
ATCC 50803
Length = 184
Score = 34.3 bits (75), Expect = 0.54
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +1
Query: 28 IGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVRIGVLDEKQ 207
+ +YG+ ++RE+ + T+ +IR L L + + R+ L R L +GV+D Q
Sbjct: 32 MNKYGVYDRRELITYRQTMRKIRHMVELLTQLPQDNNVRIELTRRLSRILYDMGVVDNAQ 91
Query: 208 MKLDXV 225
LD +
Sbjct: 92 ASLDDI 97
>UniRef50_Q23CK9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 523
Score = 33.9 bits (74), Expect = 0.72
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +1
Query: 91 IRKAARELLTLEEKDPKRLFEGNALIRRLVRIGVLDEKQMKLDXVLGLKIEDFLDVVCRR 270
+ K E + E+K+ + EG+ + ++I +D+K MK + LK E ++ V+C +
Sbjct: 143 VYKKYEEEMQKEKKNEYNIMEGSIFSIKPIKILSIDKKIMKDEDRTYLKEEYYVKVICDK 202
Query: 271 RCSKLAW 291
+AW
Sbjct: 203 YSDNVAW 209
>UniRef50_P32899 Cluster: U3 small nucleolar ribonucleoprotein
protein IMP3; n=34; Eukaryota|Rep: U3 small nucleolar
ribonucleoprotein protein IMP3 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 183
Score = 33.5 bits (73), Expect = 0.95
Identities = 22/87 (25%), Positives = 41/87 (47%)
Frame = +1
Query: 13 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVRIGV 192
++ +++ Y ++N+ + + IR+ A +L L DP R L+ +L +GV
Sbjct: 28 RDTQVMRTYHIQNREDYHKYNRICGDIRRLANKLSLLPPTDPFRRKHEQLLLDKLYAMGV 87
Query: 193 LDEKQMKLDXVLGLKIEDFLDVVCRRR 273
L K D L+ + + +CRRR
Sbjct: 88 LTTKSKISD----LENKVTVSAICRRR 110
>UniRef50_A7K4V4 Cluster: Integrase; n=3; Vibrio|Rep: Integrase -
Vibrio sp. Ex25
Length = 566
Score = 31.9 bits (69), Expect = 2.9
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 49 NKREVWRVK---YTLARIRKAARELLTLEEKDPKRLFEGNALIRRLVR-IGVLDEKQMKL 216
NKR+ R K Y+++ + K + L++KD K L+E I RL+ IG LD +
Sbjct: 218 NKRQPKRQKASQYSISNVFKRYHQSEILKDKDAKALYEAGLQIERLIEVIGDLD-----V 272
Query: 217 DXVLGLKIEDFLDVVCRRRCSKLA 288
V I +F D + + SK+A
Sbjct: 273 TEVTRAHIVEFRDTLLQLPKSKIA 296
>UniRef50_A1VAB9 Cluster: DegT/DnrJ/EryC1/StrS aminotransferase;
n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
DegT/DnrJ/EryC1/StrS aminotransferase - Desulfovibrio
vulgaris subsp. vulgaris (strain DP4)
Length = 392
Score = 31.9 bits (69), Expect = 2.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 1 ARLDQELKIIGEYGLRNKREVWRVKYTLA 87
A L Q ++++ YG+ + RE+W+ +YT A
Sbjct: 203 ADLAQRMRVLSMYGISDAREIWQKRYTRA 231
>UniRef50_A7M543 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 918
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +1
Query: 49 NKREVWRVKYTLARIRKAARELLTLEEKDPK 141
+KR + K+T++R+R+ EL++ EE+DP+
Sbjct: 673 DKRVKYYSKFTISRLREGRPELISYEEQDPR 703
>UniRef50_A0YKP8 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 430
Score = 31.5 bits (68), Expect = 3.8
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 82 LARIRKAARELLTLEEKDPKRLFEGNALIRRLVRIGVLDEKQMKLDXVLGLKIEDFLDVV 261
L+ ++A ELLTL +K ++ F RRL R+ L +K + + LK F +V+
Sbjct: 91 LSNRKEAINELLTLFDKVAEKTFSSYTYSRRLRRLNELTQKFVHSEQFSALK--RFAEVL 148
Query: 262 CR 267
C+
Sbjct: 149 CQ 150
>UniRef50_Q4P328 Cluster: Helicase SWR1; n=1; Ustilago maydis|Rep:
Helicase SWR1 - Ustilago maydis (Smut fungus)
Length = 1830
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 10 DQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRL 147
++ L+ + ++ LR + WR+ + R RKAA E E+ D ++L
Sbjct: 620 ERRLRALAKWTLREVLKQWRLAVNVVRARKAAAEKAEKEKSDKEQL 665
>UniRef50_Q2IEA1 Cluster: Mammalian cell entry related protein
precursor; n=1; Anaeromyxobacter dehalogenans 2CP-C|Rep:
Mammalian cell entry related protein precursor -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 322
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 4 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE---KDPKRLFEGNALIRR 174
R D L+ +G W++ TLA ++ AAR L L E +DP L G A +RR
Sbjct: 263 RADGALRDVGALVDPASPVAWQLGATLAELQGAARALRHLAEDLDRDPSALVRGRAEVRR 322
>UniRef50_A4C1Y1 Cluster: Putative outer membrane protein; n=1;
Polaribacter irgensii 23-P|Rep: Putative outer membrane
protein - Polaribacter irgensii 23-P
Length = 591
Score = 31.1 bits (67), Expect = 5.1
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 61 VWRVKYTLARIRKAARELLTLEEKDPK 141
+W++ Y++ +I A +LT+EE+D +
Sbjct: 115 IWKINYSIEKIASAPENILTVEERDER 141
>UniRef50_A6RBE4 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 675
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 85 ARIRKAARELLTLEEKDPKRLFEGNALIRRLVRIGVLDEKQMKLDXVLGLKIEDF 249
+R +K E L EE+ KR E N L R ++I L+EK K+ GL+ DF
Sbjct: 325 SRKKKRQAERLKKEEEKKKRDAERNRL--RKLKIEQLEEKIEKIKAAAGLRTSDF 377
>UniRef50_A6TUV4 Cluster: Fumarate reductase/succinate dehydrogenase
flavoprotein domain protein precursor; n=1; Alkaliphilus
metalliredigens QYMF|Rep: Fumarate reductase/succinate
dehydrogenase flavoprotein domain protein precursor -
Alkaliphilus metalliredigens QYMF
Length = 754
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 55 REVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 165
RE W KY +A +R + L T+ ++ P R+ E +L
Sbjct: 180 REFWAAKYPVAMLRDTPQILKTVTDRLPDRIVESQSL 216
>UniRef50_A6C7H2 Cluster: RNA-directed DNA polymerase; n=1;
Planctomyces maris DSM 8797|Rep: RNA-directed DNA
polymerase - Planctomyces maris DSM 8797
Length = 930
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 13 QELKIIGEYGLRNKREVWRVKYTLAR-IRKAARELLTLEEKDPKRLFEGNALIRRLVRIG 189
++L + G YG R R W++ L + + + R +L +E D ++ F+ N ++ +V+
Sbjct: 647 EKLFLEGSYGNRTNRSPWKMLAQLKKTVEETGRWVLAIE--DIRKAFD-NVKVKDIVK-- 701
Query: 190 VLDEKQMKLDXVLGLKIED 246
+ Q++L G+KI D
Sbjct: 702 THQQAQLELKEKHGIKIND 720
>UniRef50_A0ZFS1 Cluster: WD-40 repeat protein; n=1; Nodularia
spumigena CCY 9414|Rep: WD-40 repeat protein - Nodularia
spumigena CCY 9414
Length = 859
Score = 30.7 bits (66), Expect = 6.7
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 10 DQELKIIGEYGLRNKREVWRVKYTLARIRKAA---RELLTLEEKDPKRLFEGNALI 168
D +LK+ + +W ++ TLA +R A R+ + E+KD RL GNAL+
Sbjct: 348 DSKLKVYNQIYQTIFDNLW-IEKTLANLRPYADNYRQWILSEKKDESRLLRGNALV 402
>UniRef50_Q0UYK5 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 222
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 10 DQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFE 153
D+ELK + G + E WRV+ + + + RE+L + + + FE
Sbjct: 111 DEELKTVRLEGEMDATEFWRVQAVVEELERVLREMLNRDVRAGRSEFE 158
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,946,797
Number of Sequences: 1657284
Number of extensions: 4160336
Number of successful extensions: 9719
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 9609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9713
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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