Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30449
(301 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 0.81
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 1.1
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 21 4.3
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 20 5.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 20 5.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 5.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 20 5.7
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 20 5.7
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 20 5.7
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 20 5.7
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 20 5.7
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 20 7.6
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 20 7.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 7.6
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.0 bits (47), Expect = 0.81
Identities = 15/67 (22%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 10 DQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEK-DPKRLFEGNALIRRLVRI 186
D+ L+ + ++ + + E+ ++ A +K + L+ ++ KRLF + I +VR
Sbjct: 402 DKILQEVIKFRQKQRAEILAKEHKAAADQKLEKHLIEYKKMLKIKRLFGKDRKIMDMVRE 461
Query: 187 GVLDEKQ 207
+++EK+
Sbjct: 462 KIIEEKR 468
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 1.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 255 VQEVLNLQTKHXIEFHLFFIQYSNTNQ 175
++ V N+ K + F L F+Q N N+
Sbjct: 42 IRPVQNMTEKVHVNFGLAFVQLINVNE 68
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 20.6 bits (41), Expect = 4.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 118 TLEEKDPKRLFEGNALIR 171
T EEK P+ F G L R
Sbjct: 17 TPEEKRPRTAFSGEQLAR 34
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 5.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 34 EYGLRNKREVWRVKYTLARIRKAARELLTLE 126
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 5.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 34 EYGLRNKREVWRVKYTLARIRKAARELLTLE 126
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.2 bits (40), Expect = 5.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 34 EYGLRNKREVWRVKYTLARIRKAARELLTLE 126
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 5.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 34 EYGLRNKREVWRVKYTLARIRKAARELLTLE 126
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 5.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 34 EYGLRNKREVWRVKYTLARIRKAARELLTLE 126
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 5.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 34 EYGLRNKREVWRVKYTLARIRKAARELLTLE 126
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 5.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 34 EYGLRNKREVWRVKYTLARIRKAARELLTLE 126
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.2 bits (40), Expect = 5.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 34 EYGLRNKREVWRVKYTLARIRKAARELLTLE 126
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 19.8 bits (39), Expect = 7.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 223 VLGLKIEDFLDVVCRRRCSKLAWR 294
V+G KI++ L V C++ R
Sbjct: 48 VIGKKIKELLPEVLNNHCNRCTSR 71
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 19.8 bits (39), Expect = 7.6
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = -3
Query: 41 PYSPMIFNSW 12
PY +++NSW
Sbjct: 467 PYDHLVWNSW 476
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 301 MDFARPALNTC 269
+DF RPA TC
Sbjct: 319 IDFGRPATFTC 329
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,383
Number of Sequences: 438
Number of extensions: 1220
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6244050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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