Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30447
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.29 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   0.90 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   2.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   4.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = -2

Query: 476 LIKLEYFYTEIPHVSLDCPDSKEIFFEIFPSVSILFRFNLHFI--VWYIFYTFISKN*HF 303
           L+ L+YF   +  + L C       F IF ++ +LF   L  +  ++Y +Y FI    H 
Sbjct: 196 LLCLDYFTLHL--LFLPCIYYFYSAFIIF-TIHLLFYCVLIILLCIYYFYYAFILFTVHL 252

Query: 302 *LLVPI**FKKYFVYVYLL 246
            LLV I     YF Y++LL
Sbjct: 253 LLLVCI----YYFYYMHLL 267


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 357 SFYCMVYFLYFHLQKLTLLT 298
           SF C+++F+Y + Q+ + LT
Sbjct: 14  SFCCILFFIYLYWQQTSNLT 33


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/34 (23%), Positives = 21/34 (61%)
 Frame = -3

Query: 442 HMSALTVQILKKFSLRFSHRSLYCLDLIFILLYG 341
           ++  + V+++++ +  F+ + L C  + F+LL G
Sbjct: 138 NLHKILVKVVREINGIFAFQVLMCTSMNFVLLIG 171


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 222 FT*RITDYQ*INIYKIFLKLLNRNKELKVS 311
           F+  IT Y  +++Y +F    N N  L ++
Sbjct: 58  FSFYITSYTLLSVYSLFRIATNENNSLVIN 87


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 222 FT*RITDYQ*INIYKIFLKLLNRNKELKVS 311
           F+  IT Y  +++Y +F    N N  L ++
Sbjct: 58  FSFYITSYTLLSVYSLFRIATNENNSLVIN 87


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 419 LDSQG*HVGFLCKNTLV 469
           +D QG    F+C NTLV
Sbjct: 336 IDDQGTVESFVCVNTLV 352


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,575
Number of Sequences: 336
Number of extensions: 2275
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)