Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30447
(507 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1021 - 26945479-26945825,26946365-26946704 33 0.100
04_03_0392 + 15327017-15327370 31 0.40
04_03_0390 + 15311748-15311753,15312172-15312438 31 0.53
04_03_0334 - 14578017-14578370 31 0.53
06_03_1017 - 26923329-26923685 31 0.70
04_03_0393 + 15335298-15335651 31 0.70
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 30 0.93
06_03_0976 - 26475660-26476013 30 1.2
04_03_0335 - 14586917-14587270 30 1.2
04_03_0337 - 14602158-14602511 29 1.6
07_03_0346 - 17010472-17010843 28 5.0
06_03_1016 - 26916978-26917244,26917499-26917642,26917708-269177... 27 6.5
06_03_1020 - 26942839-26943105,26944273-26944486,26945017-26945051 27 8.7
06_03_0534 + 21888591-21888657,21888705-21888732,21889872-218899... 27 8.7
>06_03_1021 - 26945479-26945825,26946365-26946704
Length = 228
Score = 33.5 bits (73), Expect = 0.100
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 324 ESIENIPYNKMKIKSKQYRDRWENLKENFFRIWTVKAD 437
E + N+ +K++IK K +D W LKE+ WT+K++
Sbjct: 151 ELVTNVAISKVEIKEKGSKD-WVTLKESSTNTWTIKSE 187
>04_03_0392 + 15327017-15327370
Length = 117
Score = 31.5 bits (68), Expect = 0.40
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 324 ESIENIPYNKMKIKSKQYRDRWENLKENFFRIWTVKAD 437
E + N+ +++++K K +D W LKE+ WT+K+D
Sbjct: 40 ELVTNVAISEVEVKEKGGKD-WVGLKESGSNTWTLKSD 76
>04_03_0390 + 15311748-15311753,15312172-15312438
Length = 90
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 324 ESIENIPYNKMKIKSKQYRDRWENLKENFFRIWTVKAD 437
E + N+ +K+++K K +D W LKE+ WT+K++
Sbjct: 13 ELVTNVAISKVEVKEKGGKD-WVALKESSSNTWTLKSE 49
>04_03_0334 - 14578017-14578370
Length = 117
Score = 31.1 bits (67), Expect = 0.53
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 324 ESIENIPYNKMKIKSKQYRDRWENLKENFFRIWTVKAD 437
E + NI ++++IK K +D W LKE+ WT+K++
Sbjct: 40 ELVTNIAISEVEIKEKGGKD-WVALKESSSNTWTIKSE 76
>06_03_1017 - 26923329-26923685
Length = 118
Score = 30.7 bits (66), Expect = 0.70
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 324 ESIENIPYNKMKIKSKQYRDRWENLKENFFRIWTVKAD 437
E I N+ ++++IK K D W LKE+ W +K+D
Sbjct: 40 ELITNVAISEVEIKEKGGSD-WRGLKESSANTWKIKSD 76
>04_03_0393 + 15335298-15335651
Length = 117
Score = 30.7 bits (66), Expect = 0.70
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 324 ESIENIPYNKMKIKSKQYRDRWENLKENFFRIWTVKAD 437
E + N+ ++++IK K +D W LKE+ WT+K++
Sbjct: 40 ELVTNVAISEVEIKEKGGKD-WVALKESSSNTWTIKSE 76
>04_04_1183 -
31537196-31537290,31537665-31537986,31538176-31538277,
31538826-31539071,31539385-31539506,31539588-31540344,
31540447-31540770,31540872-31541052,31541208-31541602,
31541877-31541942,31542225-31542377,31542593-31542691,
31542776-31542982,31543432-31543572,31543852-31544019,
31544302-31544395,31544479-31544585,31545140-31545274,
31545549-31545656,31545975-31546049,31546197-31546262,
31546500-31546556,31546678-31546702,31546809-31546889,
31546966-31547080,31547211-31547370,31547444-31547483,
31547599-31547780,31547905-31548234
Length = 1650
Score = 30.3 bits (65), Expect = 0.93
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 379 LYCLDLIFILLYGIFSILSSPKIDT 305
LYC ++IF LL+GI ++ P +D+
Sbjct: 176 LYCSEIIFKLLFGILMVVYLPSLDS 200
>06_03_0976 - 26475660-26476013
Length = 117
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 324 ESIENIPYNKMKIKSKQYRDRWENLKENFFRIWTVKA 434
E I N+ ++++IK K D W LKE+ WT+K+
Sbjct: 40 ELITNVAISEVEIKEKGASD-WTALKESSSNTWTIKS 75
>04_03_0335 - 14586917-14587270
Length = 117
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +3
Query: 324 ESIENIPYNKMKIKSKQYRDRWENLKENFFRIWTVKAD 437
E + N+ +++++K K +D W LKE+ WT+K++
Sbjct: 40 ELVTNVAISEVEVKEKGGKD-WVGLKESGSNTWTLKSE 76
>04_03_0337 - 14602158-14602511
Length = 117
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +3
Query: 324 ESIENIPYNKMKIKSKQYRDRWENLKENFFRIWTVKAD 437
E + N+ +++++K K +D W LKE+ WT+K++
Sbjct: 40 ELVTNVAISEVEVKEKGGKD-WVALKESSSNTWTLKSE 76
>07_03_0346 - 17010472-17010843
Length = 123
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 37 NEFNNTRAPKFYQSSITFSD---IKSEGKYRPAPGSIVWINLTNPILEVAVQ 183
+E + T P ++ ++ SD +K +YR G++ ++ LT P L AVQ
Sbjct: 2 SECHPTATPVDTRAKLSASDGTPVKDPTEYRSLAGALQYLTLTRPELAYAVQ 53
>06_03_1016 -
26916978-26917244,26917499-26917642,26917708-26917783,
26917875-26918010,26918332-26918473,26920020-26920035,
26920222-26920574
Length = 377
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 330 IENIPYNKMKIKSKQYRDRWENLKENFFRIWTVK 431
I N+ +++++K K D W LKE+ WT+K
Sbjct: 42 ITNVAISEVEVKEKGTGD-WTGLKESSANTWTLK 74
>06_03_1020 - 26942839-26943105,26944273-26944486,26945017-26945051
Length = 171
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 324 ESIENIPYNKMKIKSKQYRDRWENLKENFFRIWTVKAD 437
E + N+ +++++K K + W LKE+ WT+K++
Sbjct: 94 ELVTNVTISEVEVKEKGGK-YWVGLKESSTNTWTLKSE 130
>06_03_0534 +
21888591-21888657,21888705-21888732,21889872-21889909,
21890117-21890189,21890891-21890991,21891382-21891461,
21891672-21891755
Length = 156
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 189 KAGFDKKRKVNFT*RITDYQ*INIYKIFLKLLNRNKELKVSIFGDESIENIPYNKMKIKS 368
K G+D + R+ Q + I K+ + LN+ EL + G + Y ++ I
Sbjct: 85 KGGYDSIIDLKMVSRLDQEQTLAIRKMMDRTLNQVDELTLLFRG------LNYRRISIVE 138
Query: 369 KQYRDRW 389
+QY RW
Sbjct: 139 RQYTQRW 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,857,458
Number of Sequences: 37544
Number of extensions: 189381
Number of successful extensions: 445
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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