Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30447
         (507 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF192530-1|AAF06773.1|  394|Drosophila melanogaster tRNA-specifi...    37   0.018
AE014134-2401|AAF53333.1|  394|Drosophila melanogaster CG16889-P...    37   0.018
X99511-1|CAA67861.1|  294|Drosophila melanogaster CDK5 kinase pr...    28   8.3  
AY061049-1|AAL28597.1|  294|Drosophila melanogaster LD01910p pro...    28   8.3  
AE013599-2083|AAF58119.1|  294|Drosophila melanogaster CG8203-PA...    28   8.3  

>AF192530-1|AAF06773.1|  394|Drosophila melanogaster tRNA-specific
           adenosine deaminase protein.
          Length = 394

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
 Frame = +3

Query: 252 INIYKIFLKLLNRNK-ELKVSIFGDESI---ENIPYNKMKIKSKQYRDRWENLKENFFRI 419
           I+ YK+FL  L   K   K+S   D+ +   E I Y   K  ++ Y+  W  +KE +F  
Sbjct: 318 ISKYKLFLTFLELVKFNPKLSEMFDQQLSDPERIAYASCKDLARDYQFAWREIKEKYFLQ 377

Query: 420 WTVKA-DMWDF 449
           WT K  ++ DF
Sbjct: 378 WTKKPHELLDF 388


>AE014134-2401|AAF53333.1|  394|Drosophila melanogaster CG16889-PA
           protein.
          Length = 394

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
 Frame = +3

Query: 252 INIYKIFLKLLNRNK-ELKVSIFGDESI---ENIPYNKMKIKSKQYRDRWENLKENFFRI 419
           I+ YK+FL  L   K   K+S   D+ +   E I Y   K  ++ Y+  W  +KE +F  
Sbjct: 318 ISKYKLFLTFLELVKFNPKLSEMFDQQLSDPERIAYASCKDLARDYQFAWREIKEKYFLQ 377

Query: 420 WTVKA-DMWDF 449
           WT K  ++ DF
Sbjct: 378 WTKKPHELLDF 388


>X99511-1|CAA67861.1|  294|Drosophila melanogaster CDK5 kinase
           protein.
          Length = 294

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 279 LLNRNKELKVSIFGDESIENIPYNKMKIKSKQYRDRWENLKENFF--RIWTVKADMW 443
           L+N+N ELK++ FG      IP   +K  S +    W    +  F  +++T   DMW
Sbjct: 133 LINKNGELKLADFGLARAFGIP---VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMW 186


>AY061049-1|AAL28597.1|  294|Drosophila melanogaster LD01910p
           protein.
          Length = 294

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 279 LLNRNKELKVSIFGDESIENIPYNKMKIKSKQYRDRWENLKENFF--RIWTVKADMW 443
           L+N+N ELK++ FG      IP   +K  S +    W    +  F  +++T   DMW
Sbjct: 133 LINKNGELKLADFGLARAFGIP---VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMW 186


>AE013599-2083|AAF58119.1|  294|Drosophila melanogaster CG8203-PA
           protein.
          Length = 294

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 279 LLNRNKELKVSIFGDESIENIPYNKMKIKSKQYRDRWENLKENFF--RIWTVKADMW 443
           L+N+N ELK++ FG      IP   +K  S +    W    +  F  +++T   DMW
Sbjct: 133 LINKNGELKLADFGLARAFGIP---VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMW 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,770,259
Number of Sequences: 53049
Number of extensions: 339045
Number of successful extensions: 959
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)