Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30447
(507 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical pr... 30 0.84
Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical pr... 30 0.84
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 30 0.84
U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-1... 30 0.84
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 30 0.84
U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein. 30 0.84
U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein. 30 0.84
Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical pr... 27 7.8
U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical
protein F14F3.1c protein.
Length = 296
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 7 SLNRAILKRSNEFNNTRAPKFYQSSITFSDIKSEGKYRPAPGSIVWINLTNPI 165
S RA +R + N R+ SS+ S G P PGS+ N+TNPI
Sbjct: 107 SNRRAKWRREEKMRNKRSSGTMDSSL------SNGTPTPTPGSVTGSNMTNPI 153
>Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical
protein F14F3.1b protein.
Length = 269
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 7 SLNRAILKRSNEFNNTRAPKFYQSSITFSDIKSEGKYRPAPGSIVWINLTNPI 165
S RA +R + N R+ SS+ S G P PGS+ N+TNPI
Sbjct: 80 SNRRAKWRREEKMRNKRSSGTMDSSL------SNGTPTPTPGSVTGSNMTNPI 126
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 7 SLNRAILKRSNEFNNTRAPKFYQSSITFSDIKSEGKYRPAPGSIVWINLTNPI 165
S RA +R + N R+ SS+ S G P PGS+ N+TNPI
Sbjct: 266 SNRRAKWRREEKMRNKRSSGTMDSSL------SNGTPTPTPGSVTGSNMTNPI 312
>U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-18
protein.
Length = 261
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 7 SLNRAILKRSNEFNNTRAPKFYQSSITFSDIKSEGKYRPAPGSIVWINLTNPI 165
S RA +R + N R+ SS+ S G P PGS+ N+TNPI
Sbjct: 72 SNRRAKWRREEKMRNKRSSGTMDSSL------SNGTPTPTPGSVTGSNMTNPI 118
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 7 SLNRAILKRSNEFNNTRAPKFYQSSITFSDIKSEGKYRPAPGSIVWINLTNPI 165
S RA +R + N R+ SS+ S G P PGS+ N+TNPI
Sbjct: 266 SNRRAKWRREEKMRNKRSSGTMDSSL------SNGTPTPTPGSVTGSNMTNPI 312
>U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein.
Length = 296
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 7 SLNRAILKRSNEFNNTRAPKFYQSSITFSDIKSEGKYRPAPGSIVWINLTNPI 165
S RA +R + N R+ SS+ S G P PGS+ N+TNPI
Sbjct: 107 SNRRAKWRREEKMRNKRSSGTMDSSL------SNGTPTPTPGSVTGSNMTNPI 153
>U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein.
Length = 284
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 7 SLNRAILKRSNEFNNTRAPKFYQSSITFSDIKSEGKYRPAPGSIVWINLTNPI 165
S RA +R + N R+ SS+ S G P PGS+ N+TNPI
Sbjct: 95 SNRRAKWRREEKMRNKRSSGTMDSSL------SNGTPTPTPGSVTGSNMTNPI 141
>Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical
protein T18D3.9 protein.
Length = 181
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +3
Query: 339 IPYNKMKIKSKQYRDRWENLKENFFRIWTVKADMWDF 449
I +N ++ + W+ LKE++F I+ +W F
Sbjct: 101 ILFNLRLLQHQSAEKSWDLLKEDWFNIYATSLKVWPF 137
>U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical
protein C23G10.6 protein.
Length = 540
Score = 27.1 bits (57), Expect = 7.8
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +3
Query: 144 DKSY*SDFRSGSSRQKAGFDKKRKVNFT*RITDYQ*INIYKIFLKLLNRNKELKVSIFGD 323
D SY S S Q + +++ + F+ R+T + +Y +F L ++ + V+I G
Sbjct: 223 DHSYVPSLSSQSGDQMSFYERYKNYRFS-RVTVLPKVCMYYLFNFLGHKVIQKTVAIGG- 280
Query: 324 ESIENIPYNKMKIKSKQYRDRWE 392
I N KIKS++ D W+
Sbjct: 281 -----ISVNMGKIKSQKLDDHWD 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,394,046
Number of Sequences: 27780
Number of extensions: 202232
Number of successful extensions: 552
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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