Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30447
(507 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g36840.1 68418.m04414 hypothetical protein similar to At3g243... 29 1.4
At3g43390.1 68416.m04592 hypothetical protein similar to At3g243... 29 1.4
At1g34730.1 68414.m04317 hypothetical protein similar to At3g243... 29 1.4
At4g08880.1 68417.m01464 Ulp1 protease family protein contains P... 29 2.4
At2g14774.1 68415.m01671 hypothetical protein 29 2.4
At2g05564.1 68415.m00590 hypothetical protein 29 2.4
At5g14470.1 68418.m01693 GHMP kinase-related contains similarity... 27 5.5
At4g05290.1 68417.m00801 hypothetical protein similar to At3g243... 27 5.5
At5g56960.1 68418.m07110 basic helix-loop-helix (bHLH) family pr... 27 9.6
>At5g36840.1 68418.m04414 hypothetical protein similar to At3g24380,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790
Length = 434
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 22 ILKRSNEFNNTRAPK-FYQSSITFSDIKSEGKYRP 123
+LK +N F+ P FY + +DI SEG+YRP
Sbjct: 45 VLKNANIFSMCDDPDDFYAAGHDPNDINSEGRYRP 79
>At3g43390.1 68416.m04592 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886, At4g03300
Length = 1113
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 22 ILKRSNEFNNTRAP-KFYQSSITFSDIKSEGKYRP 123
+LK +N F+ P FY + +DI SEG+YRP
Sbjct: 928 VLKDANIFSMCNDPYDFYAAGHDPNDINSEGRYRP 962
>At1g34730.1 68414.m04317 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At3g43390, At2g05560, At4g08880, At1g27790
Length = 163
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 22 ILKRSNEFNNTRAPK-FYQSSITFSDIKSEGKYRP 123
+LK +N F+ P FY + +DI SEG+YRP
Sbjct: 45 VLKNANIFSMCDDPDDFYAAGHDPNDINSEGRYRP 79
>At4g08880.1 68417.m01464 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At1g34730, At1g27790, At1g34740, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1463
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 22 ILKRSNEFNNTRAPK-FYQSSITFSDIKSEGKYRP 123
+LK +N F+ P FY + +DI SEG+YRP
Sbjct: 1275 VLKDANIFSMCDDPDDFYAAGHDPNDINSEGRYRP 1309
>At2g14774.1 68415.m01671 hypothetical protein
Length = 230
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 22 ILKRSNEFNNTRAPK-FYQSSITFSDIKSEGKYRP 123
+LK +N F+ P FY + +DI SEG+YRP
Sbjct: 45 VLKDANIFSMCDDPDDFYAAGHDPNDINSEGRYRP 79
>At2g05564.1 68415.m00590 hypothetical protein
Length = 231
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 22 ILKRSNEFNNTRAPK-FYQSSITFSDIKSEGKYRP 123
+LK +N F+ P FY + +DI SEG+YRP
Sbjct: 46 VLKDANIFSMCDDPDDFYAAGHDPNDINSEGRYRP 80
>At5g14470.1 68418.m01693 GHMP kinase-related contains similarity to
D-glycero-D-manno-heptose 7-phosphate kinase
[Aneurinibacillus thermoaerophilus]
gi|13491143|gb|AAK27850
Length = 272
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 261 YKIFLKLLNRNKELKVSIFGDESIENIPYNKMKIKSK 371
Y +L+NRN +L+ S+FGDE + + +++ K
Sbjct: 176 YSNLKELMNRNFDLRRSMFGDECLGAMNIEMVEVARK 212
>At4g05290.1 68417.m00801 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790
Length = 213
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 22 ILKRSNEFNNTRAPK-FYQSSITFSDIKSEGKYRP 123
+LK +N F+ P FY +DI SEG+YRP
Sbjct: 28 VLKDANIFSMCDDPDDFYAVGHDPNDINSEGRYRP 62
>At5g56960.1 68418.m07110 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 466
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 276 KLLNRNKELKVSIFGDESIEN 338
KLL RN+E++ + G+ IEN
Sbjct: 340 KLLERNREVEAKLAGEREIEN 360
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,593,516
Number of Sequences: 28952
Number of extensions: 181496
Number of successful extensions: 517
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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