Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30446
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68105-1|CAA92122.2|  195|Caenorhabditis elegans Hypothetical pr...    59   3e-09
Z83113-10|CAI46598.1|  556|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z83113-9|CAB05548.2|  497|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z73975-5|CAA98278.2|  556|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z73975-4|CAA98279.2|  497|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U40946-4|AAA81726.1|  414|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AL110487-2|CAB54425.1|  445|Caenorhabditis elegans Hypothetical ...    28   7.3  
AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical...    27   9.6  

>Z68105-1|CAA92122.2|  195|Caenorhabditis elegans Hypothetical
           protein F13E6.1 protein.
          Length = 195

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
 Frame = +2

Query: 257 IATLRTVLXSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQKTDSVIKTTA-- 430
           I+TL+ VL ++ + +++LKRKLG+T + E+++D+N+ LK V ++  YQKT  V   T+  
Sbjct: 75  ISTLKQVLSARQKHAAELKRKLGLTPFSELSQDINRSLKTVTDTDAYQKTAEVAAATSDT 134

Query: 431 --EKTSSI-IGGITAGVSSKLGQMRNSESSAPS 520
             EK + +    +     SKLG   N+   A S
Sbjct: 135 VKEKWNDMRNSSLFKSFESKLGSALNNAKMAAS 167



 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +1

Query: 505 VFRSIEERVGSAYENVKGKVASRSNSTQSFDEALRDASGATSPPIPEHKPL 657
           +F+S E ++GSA  N K    + S S      A R  S   +P   E KP+
Sbjct: 147 LFKSFESKLGSALNNAK---MAASTSIDHLAGAARGPSQTGTPVAEEAKPI 194


>Z83113-10|CAI46598.1|  556|Caenorhabditis elegans Hypothetical
           protein K08H10.2b protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/65 (23%), Positives = 31/65 (47%)
 Frame = +1

Query: 424 DRREDVFDHRRHHGRRLQQARSDAQLGVFRSIEERVGSAYENVKGKVASRSNSTQSFDEA 603
           D+  DVFD  + HG    +  SD+   +    E+ +   Y++ K K +   +S +   E 
Sbjct: 127 DKTSDVFDSLKEHG----EDASDSAKDLANDAEDAIKDTYDSAKEKASDAFDSAKEHGED 182

Query: 604 LRDAS 618
            ++++
Sbjct: 183 AQESA 187


>Z83113-9|CAB05548.2|  497|Caenorhabditis elegans Hypothetical
           protein K08H10.2a protein.
          Length = 497

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/65 (23%), Positives = 31/65 (47%)
 Frame = +1

Query: 424 DRREDVFDHRRHHGRRLQQARSDAQLGVFRSIEERVGSAYENVKGKVASRSNSTQSFDEA 603
           D+  DVFD  + HG    +  SD+   +    E+ +   Y++ K K +   +S +   E 
Sbjct: 127 DKTSDVFDSLKEHG----EDASDSAKDLANDAEDAIKDTYDSAKEKASDAFDSAKEHGED 182

Query: 604 LRDAS 618
            ++++
Sbjct: 183 AQESA 187


>Z73975-5|CAA98278.2|  556|Caenorhabditis elegans Hypothetical
           protein K08H10.2b protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/65 (23%), Positives = 31/65 (47%)
 Frame = +1

Query: 424 DRREDVFDHRRHHGRRLQQARSDAQLGVFRSIEERVGSAYENVKGKVASRSNSTQSFDEA 603
           D+  DVFD  + HG    +  SD+   +    E+ +   Y++ K K +   +S +   E 
Sbjct: 127 DKTSDVFDSLKEHG----EDASDSAKDLANDAEDAIKDTYDSAKEKASDAFDSAKEHGED 182

Query: 604 LRDAS 618
            ++++
Sbjct: 183 AQESA 187


>Z73975-4|CAA98279.2|  497|Caenorhabditis elegans Hypothetical
           protein K08H10.2a protein.
          Length = 497

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/65 (23%), Positives = 31/65 (47%)
 Frame = +1

Query: 424 DRREDVFDHRRHHGRRLQQARSDAQLGVFRSIEERVGSAYENVKGKVASRSNSTQSFDEA 603
           D+  DVFD  + HG    +  SD+   +    E+ +   Y++ K K +   +S +   E 
Sbjct: 127 DKTSDVFDSLKEHG----EDASDSAKDLANDAEDAIKDTYDSAKEKASDAFDSAKEHGED 182

Query: 604 LRDAS 618
            ++++
Sbjct: 183 AQESA 187


>U40946-4|AAA81726.1|  414|Caenorhabditis elegans Hypothetical
           protein W05H9.1 protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
 Frame = +2

Query: 278 LXSKIRQSSDLKRK---LGITVWKEITEDVNQGLKNV------KESQVYQKTDSVIKTTA 430
           L  + ++ ++ K+K     I  WKE+++ V + +++V      KE +  QK D  +KT  
Sbjct: 83  LEKEKQEKAEAKKKEAEAAIEKWKEVSQQVGEFVESVKEKKQAKEQEKQQKIDDFVKTFT 142

Query: 431 EK 436
           +K
Sbjct: 143 DK 144


>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
           protein F45E4.4 protein.
          Length = 2361

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = +2

Query: 266 LRTVLXSKIRQSSDLKRKLGITVWKEITEDVNQ-GLKNV--KESQ-VYQKTDSVIKTTAE 433
           L T     IRQ S +  K+   +  E ++  +  GLKN   K +Q V   TDSVIK    
Sbjct: 346 LTTEEKEHIRQMSLMAEKMDEEILDEQSKPKSTFGLKNFFGKATQSVMHATDSVIKNVQN 405

Query: 434 KTSSIIGGITAGVSSKLGQMRNS 502
           ++   + G+T      + Q   S
Sbjct: 406 QSKQSLSGLTQEELDNIAQATES 428


>AL110487-2|CAB54425.1|  445|Caenorhabditis elegans Hypothetical
           protein Y39E4B.2 protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 293 RQSSDLKRKLGITVWKEITEDVNQGLKNVKES 388
           ++ S LK KLGIT W ++ + + +  K +K S
Sbjct: 204 KEYSRLKMKLGITSWMKLKDPIEELKKIIKTS 235


>AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical
           protein Y57A10A.19 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +1

Query: 373 KRQRKPSIPKN*LCDKNDRREDVFDHRRHHGRRLQQARSDAQLGVFRSIEER 528
           K QRKP   +    ++ D+RED  D RR      ++ RS     V R   ER
Sbjct: 262 KDQRKPREDRRRSVERQDQREDRRDRRRSPEDPRERRRSPEDRTVRRRSPER 313


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,500,072
Number of Sequences: 27780
Number of extensions: 257731
Number of successful extensions: 1021
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)