Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30446
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.1  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            23   3.6  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   4.8  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    22   4.8  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   6.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 15/57 (26%), Positives = 22/57 (38%)
 Frame = +1

Query: 475  QQARSDAQLGVFRSIEERVGSAYENVKGKVASRSNSTQSFDEALRDASGATSPPIPE 645
            QQA S  Q+      +  +     N +     R     S DE+ R  S +   P+PE
Sbjct: 1311 QQASSQQQIPESMRSKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSASGGRPVPE 1367


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 585 SRVRSRSHFTLDVFISRADAFF 520
           +R+   SHF LD  + R   FF
Sbjct: 22  ARIVKASHFELDYMLGRKITFF 43


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +1

Query: 499 LGVFRSIEERVGSAYENVKGKVASRSNSTQSFDEALR 609
           LG F  +  ++GS+ ++V   +A      ++F +ALR
Sbjct: 189 LGKFHRVCTQIGSSMKSVGEVMAIGRKFEEAFQKALR 225


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +2

Query: 308 LKRKLGITVWKEITEDVNQGLKNVKESQVYQKTDSVIKTTAEKTSSIIGG 457
           + RK+G +V   +    N GL  +K +  ++ T+   K   E     + G
Sbjct: 29  MTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTEIKFKLGEEFEEETVDG 78


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 537 RADAFFDGAEDSELR 493
           RA +FFD  ED+ LR
Sbjct: 550 RATSFFDPEEDAPLR 564


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,621
Number of Sequences: 438
Number of extensions: 2957
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)