Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30444
         (415 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   3.3  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   4.4  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   4.4  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   5.8  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            22   7.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   7.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 304 AVPSSSYRLGKTLLNSTTKRYPL*TSSRRHRNISPTPAGTLAT 176
           +V  +S  L K+L  ST    P   SSR+ R     PAG  A+
Sbjct: 392 SVAPASKLLSKSLQPSTLPTRPSPKSSRKRRTGHRPPAGMNAS 434


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 348 RXFVKDYPDFI 380
           R F+K+YPDFI
Sbjct: 36  REFLKNYPDFI 46


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +2

Query: 293 RRNSVRPCCNRKSIQEGYTXVRQRLS*FHRSQTNIRAI 406
           R     PCC    I   Y    QR S  HR+   + A+
Sbjct: 218 RNTRYYPCCTEPYIDITYNVTLQRQSDTHRAIVIVPAL 255


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 134 SVIHPYTVSGSSTTSVKCFRNSSSNFVTFSTEDRTLEISCH 12
           SV   Y  SGS +   +C+ +SS      +T+   L  S H
Sbjct: 186 SVEFSYITSGSGSRIDRCYVSSSLETQLRTTDMHVLSFSDH 226


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 71  NCENISRWWSTIQIQYTD 124
           N + +SRW+   + Q+TD
Sbjct: 694 NFDQVSRWYQGWKAQFTD 711


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +2

Query: 50   TLRSSMKNCENISRWWSTIQIQYTDV 127
            T+R+ + NCE +S++ S   ++  D+
Sbjct: 2436 TIRTMVHNCEGLSKYVSYGLLKLLDI 2461


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,173
Number of Sequences: 2352
Number of extensions: 8574
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)