Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30444
         (415 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-3|CAA86056.1|  621|Caenorhabditis elegans Hypothetical pr...    28   2.3  
AF024491-2|AAT92081.1|  765|Caenorhabditis elegans Hypothetical ...    28   2.3  
AF024491-1|AAB70312.2|  850|Caenorhabditis elegans Hypothetical ...    28   2.3  
Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z74026-4|CAA98416.5|  774|Caenorhabditis elegans Hypothetical pr...    26   9.4  
AF039037-2|AAO21432.1|  324|Caenorhabditis elegans Hypothetical ...    26   9.4  

>Z37983-3|CAA86056.1|  621|Caenorhabditis elegans Hypothetical
           protein B0393.3 protein.
          Length = 621

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 11/44 (25%), Positives = 25/44 (56%)
 Frame = -2

Query: 255 LQNVILSKLHQGVIEIFLPHRPVR*QRINSKKVVHELSPCIRNT 124
           +QN  L +L   +++I + H P++ + +  + V H LS  ++ +
Sbjct: 30  VQNSALLQLKDSILDIIVEHVPLKDRLLKLRPVCHRLSDSVKRS 73


>AF024491-2|AAT92081.1|  765|Caenorhabditis elegans Hypothetical
           protein C24A1.3b protein.
          Length = 765

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 323 RKSIQEGYTXVRQRLS*FHRSQTNI 397
           +K I EGY+ VR RLS   RS++N+
Sbjct: 17  KKKISEGYSVVRSRLSDDVRSRSNL 41


>AF024491-1|AAB70312.2|  850|Caenorhabditis elegans Hypothetical
           protein C24A1.3a protein.
          Length = 850

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 323 RKSIQEGYTXVRQRLS*FHRSQTNI 397
           +K I EGY+ VR RLS   RS++N+
Sbjct: 17  KKKISEGYSVVRSRLSDDVRSRSNL 41


>Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical protein
            F59F3.1 protein.
          Length = 1227

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 46   ENVTKFDEELRKHFTLVVDDPDTVYGCITD 135
            + + KFDE+L +   L+V+DPD +  C +D
Sbjct: 979  KKIYKFDEKLGEGTRLLVEDPDAL--CTSD 1006


>Z74026-4|CAA98416.5|  774|Caenorhabditis elegans Hypothetical
           protein B0240.2 protein.
          Length = 774

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +1

Query: 46  ENVTKFDEELRKHFTLVVDDPDTVYGCITDTWTKFMDYF 162
           E +TKF + +R+H+ ++ +  +     +   +TK +D F
Sbjct: 229 EKMTKFVDIMRRHYRVIANLSNQCRNMLKTPYTKCLDIF 267


>AF039037-2|AAO21432.1|  324|Caenorhabditis elegans Hypothetical
           protein R02C2.6 protein.
          Length = 324

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 4   KGKWQDISKVRSSVENVTKFDEELRKHFTLVVDDPDTVYGCITDTWTK 147
           KG W  +S+   S+        ELR   +++ +DP  +YG   D   K
Sbjct: 244 KGAWSRMSQQVISLLRKILLQAELRATISMIEEDPWFIYGEEVDAENK 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,216,263
Number of Sequences: 27780
Number of extensions: 182553
Number of successful extensions: 499
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)