BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30442
(406 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 142 2e-34
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 142 2e-34
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 142 2e-34
BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 89 2e-18
BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 89 2e-18
BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 89 2e-18
AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 89 2e-18
AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 89 2e-18
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 39 0.002
BT028772-1|ABI34153.1| 178|Drosophila melanogaster IP01717p pro... 29 3.1
AF410850-1|AAL02117.1| 178|Drosophila melanogaster E2-C type ub... 29 3.1
AE014296-2152|AAF49909.1| 178|Drosophila melanogaster CG10682-P... 29 3.1
Y12400-1|CAA73031.1| 548|Drosophila melanogaster putative organ... 27 9.5
AY089433-1|AAL90171.1| 583|Drosophila melanogaster AT25352p pro... 27 9.5
AY058437-1|AAL13666.1| 548|Drosophila melanogaster GH21655p pro... 27 9.5
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P... 27 9.5
AE014298-143|AAO41631.1| 183|Drosophila melanogaster CG33082-PA... 27 9.5
AE014297-3516|AAF56271.1| 548|Drosophila melanogaster CG6331-PA... 27 9.5
AE014297-1299|AAF54639.2| 583|Drosophila melanogaster CG6744-PA... 27 9.5
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 142 bits (343), Expect = 2e-34
Identities = 62/85 (72%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 ATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIIC 178
AT+NMLRIAEPYI WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I C
Sbjct: 118 ATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQC 177
Query: 179 VXDLIHEIFTVGEKFKYASNFLWPF 253
V DL+HEIFTVG FKYASNFLWPF
Sbjct: 178 VEDLVHEIFTVGPNFKYASNFLWPF 202
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 253 QLNNPTGGWRKKTIHYVDGGDFGNREDKINDLLRRMV 363
+LN PTGGWRKK HYV+GGDFGNRED+IN LLR+MV
Sbjct: 203 KLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKMV 239
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 142 bits (343), Expect = 2e-34
Identities = 62/85 (72%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 ATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIIC 178
AT+NMLRIAEPYI WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I C
Sbjct: 131 ATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQC 190
Query: 179 VXDLIHEIFTVGEKFKYASNFLWPF 253
V DL+HEIFTVG FKYASNFLWPF
Sbjct: 191 VEDLVHEIFTVGPNFKYASNFLWPF 215
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 253 QLNNPTGGWRKKTIHYVDGGDFGNREDKINDLLRRMV 363
+LN PTGGWRKK HYV+GGDFGNRED+IN LLR+MV
Sbjct: 216 KLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKMV 252
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 142 bits (343), Expect = 2e-34
Identities = 62/85 (72%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 ATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIIC 178
AT+NMLRIAEPYI WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I C
Sbjct: 131 ATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQC 190
Query: 179 VXDLIHEIFTVGEKFKYASNFLWPF 253
V DL+HEIFTVG FKYASNFLWPF
Sbjct: 191 VEDLVHEIFTVGPNFKYASNFLWPF 215
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 253 QLNNPTGGWRKKTIHYVDGGDFGNREDKINDLLRRMV 363
+LN PTGGWRKK HYV+GGDFGNRED+IN LLR+MV
Sbjct: 216 KLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKMV 252
>BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p
protein.
Length = 257
Score = 89.0 bits (211), Expect = 2e-18
Identities = 37/80 (46%), Positives = 58/80 (72%)
Frame = +2
Query: 14 MLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVXDLI 193
+LR+ EP++ +G P+L S+RELV+K+GFA++ G++ I SN++VE++L +IC+ D+I
Sbjct: 140 LLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDII 199
Query: 194 HEIFTVGEKFKYASNFLWPF 253
HEI TVG F + FL F
Sbjct: 200 HEICTVGPNFAAVNEFLCAF 219
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 238 FPVALQLNNPTGGWRKK-TIHYVDGGDFGNREDKINDLLRR 357
F A L++P+ GW+KK ++ Y GG++G+R IN+L+ R
Sbjct: 215 FLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
>BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p
protein.
Length = 257
Score = 89.0 bits (211), Expect = 2e-18
Identities = 37/80 (46%), Positives = 58/80 (72%)
Frame = +2
Query: 14 MLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVXDLI 193
+LR+ EP++ +G P+L S+RELV+K+GFA++ G++ I SN++VE++L +IC+ D+I
Sbjct: 140 LLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDII 199
Query: 194 HEIFTVGEKFKYASNFLWPF 253
HEI TVG F + FL F
Sbjct: 200 HEICTVGPNFAAVNEFLCAF 219
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 238 FPVALQLNNPTGGWRKK-TIHYVDGGDFGNREDKINDLLRR 357
F A L++P+ GW+KK ++ Y GG++G+R IN+L+ R
Sbjct: 215 FLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
>BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p
protein.
Length = 257
Score = 89.0 bits (211), Expect = 2e-18
Identities = 37/80 (46%), Positives = 58/80 (72%)
Frame = +2
Query: 14 MLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVXDLI 193
+LR+ EP++ +G P+L S+RELV+K+GFA++ G++ I SN++VE++L +IC+ D+I
Sbjct: 140 LLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDII 199
Query: 194 HEIFTVGEKFKYASNFLWPF 253
HEI TVG F + FL F
Sbjct: 200 HEICTVGPNFAAVNEFLCAF 219
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 238 FPVALQLNNPTGGWRKK-TIHYVDGGDFGNREDKINDLLRR 357
F A L++P+ GW+KK ++ Y GG++G+R IN+L+ R
Sbjct: 215 FLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
>AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p
protein.
Length = 257
Score = 89.0 bits (211), Expect = 2e-18
Identities = 37/80 (46%), Positives = 58/80 (72%)
Frame = +2
Query: 14 MLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVXDLI 193
+LR+ EP++ +G P+L S+RELV+K+GFA++ G++ I SN++VE++L +IC+ D+I
Sbjct: 140 LLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDII 199
Query: 194 HEIFTVGEKFKYASNFLWPF 253
HEI TVG F + FL F
Sbjct: 200 HEICTVGPNFAAVNEFLCAF 219
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 238 FPVALQLNNPTGGWRKK-TIHYVDGGDFGNREDKINDLLRR 357
F A L++P+ GW+KK ++ Y GG++G+R IN+L+ R
Sbjct: 215 FLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
>AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA
protein.
Length = 257
Score = 89.0 bits (211), Expect = 2e-18
Identities = 37/80 (46%), Positives = 58/80 (72%)
Frame = +2
Query: 14 MLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVXDLI 193
+LR+ EP++ +G P+L S+RELV+K+GFA++ G++ I SN++VE++L +IC+ D+I
Sbjct: 140 LLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDII 199
Query: 194 HEIFTVGEKFKYASNFLWPF 253
HEI TVG F + FL F
Sbjct: 200 HEICTVGPNFAAVNEFLCAF 219
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 238 FPVALQLNNPTGGWRKK-TIHYVDGGDFGNREDKINDLLRR 357
F A L++P+ GW+KK ++ Y GG++G+R IN+L+ R
Sbjct: 215 FLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = -1
Query: 196 MDEVXNTDNVVFMEPL-LNNAVGSDWYTLSTQLGESTFVY*LTDTL*VGVSPSNVRLGDT 20
MD++ + N+V + L L++ V D + L+ L EST V L L +G++P +V LGD
Sbjct: 1 MDKILDALNLVRLTQLPLDHEVIGDGHALAVMLHESTLVDQLPHGLQIGIAPGDVGLGDA 60
Query: 19 *HI 11
H+
Sbjct: 61 QHV 63
>BT028772-1|ABI34153.1| 178|Drosophila melanogaster IP01717p
protein.
Length = 178
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 92 GFAKLSGQRIPITSNSIVEKRLHKH--NIICVXDLIHEIFTVGEK-FKYASNFLWPFN 256
G +K S +P+ N V KRLHK N++ + F GE FK+ P N
Sbjct: 16 GGSKHSDDSMPVKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRN 73
>AF410850-1|AAL02117.1| 178|Drosophila melanogaster E2-C type
ubiquitin conjugatingenzyme protein.
Length = 178
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 92 GFAKLSGQRIPITSNSIVEKRLHKH--NIICVXDLIHEIFTVGEK-FKYASNFLWPFN 256
G +K S +P+ N V KRLHK N++ + F GE FK+ P N
Sbjct: 16 GGSKHSDDSMPVKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRN 73
>AE014296-2152|AAF49909.1| 178|Drosophila melanogaster CG10682-PA
protein.
Length = 178
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 92 GFAKLSGQRIPITSNSIVEKRLHKH--NIICVXDLIHEIFTVGEK-FKYASNFLWPFN 256
G +K S +P+ N V KRLHK N++ + F GE FK+ P N
Sbjct: 16 GGSKHSDDSMPVKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRN 73
>Y12400-1|CAA73031.1| 548|Drosophila melanogaster putative organic
cation transporterprotein.
Length = 548
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -2
Query: 249 GHRKLLAYLN-FSPTVK-ISWMRSSTQIMLCLWSLFSTMLLEVIGIRCPLSLANPRLYTN 76
G+ ++ +L F P K I ++ I+ L LL RC L N +Y
Sbjct: 2 GYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYEL 61
Query: 75 SRTLFKLGYPQ 43
S L+ L YP+
Sbjct: 62 SPHLWNLSYPE 72
>AY089433-1|AAL90171.1| 583|Drosophila melanogaster AT25352p
protein.
Length = 583
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 306 VDIMNGLLAPTTSWIV-QLKGHRKLLAYLNF 217
++++N + PTT W++ +LK H + L F
Sbjct: 52 IEVINSVQDPTTQWVLNELKNHCQTFKVLGF 82
>AY058437-1|AAL13666.1| 548|Drosophila melanogaster GH21655p
protein.
Length = 548
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -2
Query: 249 GHRKLLAYLN-FSPTVK-ISWMRSSTQIMLCLWSLFSTMLLEVIGIRCPLSLANPRLYTN 76
G+ ++ +L F P K I ++ I+ L LL RC L N +Y
Sbjct: 2 GYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYEL 61
Query: 75 SRTLFKLGYPQ 43
S L+ L YP+
Sbjct: 62 SPHLWNLSYPE 72
>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
protein.
Length = 4899
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 38 IAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSI 142
IAWG PN S E KRG S R P+ +S+
Sbjct: 3348 IAWGLPNASSDEE---KRGPVPFSSTRDPLGGSSL 3379
>AE014298-143|AAO41631.1| 183|Drosophila melanogaster CG33082-PA
protein.
Length = 183
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 289 SSCANHQLDCSIEGPQEITRVLEL 218
S AN Q DC +E PQ I +V+ L
Sbjct: 153 SFAANSQRDCWLEQPQSIVQVVSL 176
>AE014297-3516|AAF56271.1| 548|Drosophila melanogaster CG6331-PA
protein.
Length = 548
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -2
Query: 249 GHRKLLAYLN-FSPTVK-ISWMRSSTQIMLCLWSLFSTMLLEVIGIRCPLSLANPRLYTN 76
G+ ++ +L F P K I ++ I+ L LL RC L N +Y
Sbjct: 2 GYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYEL 61
Query: 75 SRTLFKLGYPQ 43
S L+ L YP+
Sbjct: 62 SPHLWNLSYPE 72
>AE014297-1299|AAF54639.2| 583|Drosophila melanogaster CG6744-PA
protein.
Length = 583
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 306 VDIMNGLLAPTTSWIV-QLKGHRKLLAYLNF 217
++++N + PTT W++ +LK H + L F
Sbjct: 52 IEVINSVQDPTTQWVLNELKNHCQTFKVLGF 82
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,345,132
Number of Sequences: 53049
Number of extensions: 375998
Number of successful extensions: 1120
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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