Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30438
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 31 1.0
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 31 1.0
AF078787-9|AAK82921.1| 183|Caenorhabditis elegans Hypothetical ... 31 1.0
U64857-11|AAC25864.2| 313|Caenorhabditis elegans Hypothetical p... 29 3.2
Z93393-6|CAB07691.2| 495|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein. 28 5.6
Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical p... 28 7.4
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 28 7.4
AJ582073-1|CAE46543.1| 518|Caenorhabditis elegans flavin monoox... 28 7.4
AC006663-1|AAF39901.1| 518|Caenorhabditis elegans Flavin-contai... 28 7.4
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -2
Query: 82 PQYYRSQKKF--RFFHAHHYSDRRGY 11
PQ +R Q F R H+H Y D RGY
Sbjct: 159 PQKFRGQDDFKGRIIHSHSYKDHRGY 184
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -2
Query: 82 PQYYRSQKKF--RFFHAHHYSDRRGY 11
PQ +R Q F R H+H Y D RGY
Sbjct: 159 PQKFRGQDDFKGRIIHSHSYKDHRGY 184
>AF078787-9|AAK82921.1| 183|Caenorhabditis elegans Hypothetical
protein T17A3.9 protein.
Length = 183
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 159 ELDRFSCTQHSLLQEKFNLMMKNEKNHNTTDRKRSF 52
E+ F TQH FN KN ++HN+ +RKR F
Sbjct: 142 EIQIFRSTQHL-----FNFQTKNNRSHNSRNRKRGF 172
>U64857-11|AAC25864.2| 313|Caenorhabditis elegans Hypothetical
protein C37C3.9 protein.
Length = 313
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 95 FIIKLNFSCNRECCVQEKRSSSLCLF 172
F++ L SCNRE CVQ +RS LF
Sbjct: 279 FVLYLCKSCNREVCVQCRRSLCSRLF 304
>Z93393-6|CAB07691.2| 495|Caenorhabditis elegans Hypothetical
protein Y48E1B.5 protein.
Length = 495
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 285 ILNALKEVSL-QNVY*LLKIAKLNYNFIYKFIINLIF*SFNSKL 413
+L L+ +L QN KI + N NF++K NLIF F KL
Sbjct: 195 VLGGLRTQALKQNFQFSTKILQKNSNFLWKIQKNLIFSDFRLKL 238
>Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical
protein W05E10.3 protein.
Length = 439
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 546 ISIHAEFKTTKKLN-IFITKYLNIKMKLNFPMCDHCSNSDIS 424
+ + A+ + KK + + I + LNIK +++ C CSN +S
Sbjct: 352 VEVEADIEPPKKRSKLSIDEILNIKSEVSPSQCSPCSNESLS 393
>AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein.
Length = 439
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 546 ISIHAEFKTTKKLN-IFITKYLNIKMKLNFPMCDHCSNSDIS 424
+ + A+ + KK + + I + LNIK +++ C CSN +S
Sbjct: 352 VEVEADIEPPKKRSKLSIDEILNIKSEVSPSQCSPCSNESLS 393
>Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical
protein Y57G11C.5 protein.
Length = 512
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -3
Query: 180 WRGK-RQSELDRFSCTQHSLLQEKF 109
W GK R++ L+RF+CT H E+F
Sbjct: 178 WIGKTRKAGLNRFACTYHKKKNEEF 202
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = -3
Query: 186 RPWRGKRQSELDRFSCTQHSLLQEKFNL--MMKNEKNHNTTDRKRSFASFTRTIILTVED 13
RPW+G +DRF H + ++ ++ K ++++ F R +L + D
Sbjct: 67 RPWQGDSTITIDRFDARSHLSKMDLVDIDEIIPKTKTEIVDEKEQIVTDFERYRVLIIND 126
Query: 12 ISNI 1
+
Sbjct: 127 YKKV 130
>AJ582073-1|CAE46543.1| 518|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 518
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = -2
Query: 82 PQYYRSQKKF--RFFHAHHYSDRRGY 11
P+ + Q+KF R H+H Y D +GY
Sbjct: 159 PEPWPGQEKFKGRIIHSHDYKDHKGY 184
>AC006663-1|AAF39901.1| 518|Caenorhabditis elegans
Flavin-containing monooxygenasefamily protein 5 protein.
Length = 518
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = -2
Query: 82 PQYYRSQKKF--RFFHAHHYSDRRGY 11
P+ + Q+KF R H+H Y D +GY
Sbjct: 159 PEPWPGQEKFKGRIIHSHDYKDHKGY 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,948,911
Number of Sequences: 27780
Number of extensions: 300044
Number of successful extensions: 786
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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