Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30438
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    23   2.1  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    23   2.1  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    23   2.1  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    23   2.1  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    23   2.1  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    23   2.1  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    23   2.1  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    23   2.1  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    23   2.1  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    23   2.1  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.9  

>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 228 ERE*ENRQSVSRTTRPWRGKRQSELDRFSCTQHSLLQEKFNLMMKNE---KNHNTTDRKR 58
           +R  E R+   R  +    K +   +R SC ++S  +E+   + KNE   + +  T ++R
Sbjct: 7   DRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKER 66

Query: 57  S 55
           S
Sbjct: 67  S 67


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 228 ERE*ENRQSVSRTTRPWRGKRQSELDRFSCTQHSLLQEKFNLMMKNE---KNHNTTDRKR 58
           +R  E R+   R  +    K +   +R SC ++S  +E+   + KNE   + +  T ++R
Sbjct: 7   DRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKER 66

Query: 57  S 55
           S
Sbjct: 67  S 67


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 228 ERE*ENRQSVSRTTRPWRGKRQSELDRFSCTQHSLLQEKFNLMMKNE---KNHNTTDRKR 58
           +R  E R+   R  +    K +   +R SC ++S  +E+   + KNE   + +  T ++R
Sbjct: 7   DRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKER 66

Query: 57  S 55
           S
Sbjct: 67  S 67


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 228 ERE*ENRQSVSRTTRPWRGKRQSELDRFSCTQHSLLQEKFNLMMKNE---KNHNTTDRKR 58
           +R  E R+   R  +    K +   +R SC ++S  +E+   + KNE   + +  T ++R
Sbjct: 7   DRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKER 66

Query: 57  S 55
           S
Sbjct: 67  S 67


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 228 ERE*ENRQSVSRTTRPWRGKRQSELDRFSCTQHSLLQEKFNLMMKNE---KNHNTTDRKR 58
           +R  E R+   R  +    K +   +R SC ++S  +E+   + KNE   + +  T ++R
Sbjct: 240 DRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKER 299

Query: 57  S 55
           S
Sbjct: 300 S 300


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 228 ERE*ENRQSVSRTTRPWRGKRQSELDRFSCTQHSLLQEKFNLMMKNE---KNHNTTDRKR 58
           +R  E R+   R  +    K +   +R SC ++S  +E+   + KNE   + +  T ++R
Sbjct: 240 DRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKER 299

Query: 57  S 55
           S
Sbjct: 300 S 300


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 228 ERE*ENRQSVSRTTRPWRGKRQSELDRFSCTQHSLLQEKFNLMMKNE---KNHNTTDRKR 58
           +R  E R+   R  +    K +   +R SC ++S  +E+   + KNE   + +  T ++R
Sbjct: 240 DRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKER 299

Query: 57  S 55
           S
Sbjct: 300 S 300


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 228 ERE*ENRQSVSRTTRPWRGKRQSELDRFSCTQHSLLQEKFNLMMKNE---KNHNTTDRKR 58
           +R  E R+   R  +    K +   +R SC ++S  +E+   + KNE   + +  T ++R
Sbjct: 240 DRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKER 299

Query: 57  S 55
           S
Sbjct: 300 S 300


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 228 ERE*ENRQSVSRTTRPWRGKRQSELDRFSCTQHSLLQEKFNLMMKNE---KNHNTTDRKR 58
           +R  E R+   R  +    K +   +R SC ++S  +E+   + KNE   + +  T ++R
Sbjct: 240 DRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKER 299

Query: 57  S 55
           S
Sbjct: 300 S 300


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 228 ERE*ENRQSVSRTTRPWRGKRQSELDRFSCTQHSLLQEKFNLMMKNE---KNHNTTDRKR 58
           +R  E R+   R  +    K +   +R SC ++S  +E+   + KNE   + +  T ++R
Sbjct: 229 DRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKER 288

Query: 57  S 55
           S
Sbjct: 289 S 289


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 438 NSDISNIVKVYC*NFKKL 385
           N + +N  K+YC N+KKL
Sbjct: 90  NYNNNNYKKLYCNNYKKL 107


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 438 NSDISNIVKVYC*NFKKL 385
           N + +N  K+YC N+KKL
Sbjct: 90  NYNNNNYKKLYCNNYKKL 107


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 80  WFFSFFIIKLNFSCNRECC 136
           W F   + KL  +C+  CC
Sbjct: 102 WIFGIHLCKLWLTCDVLCC 120


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 80  WFFSFFIIKLNFSCNRECC 136
           W F   + KL  +C+  CC
Sbjct: 102 WIFGIHLCKLWLTCDVLCC 120


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 80  WFFSFFIIKLNFSCNRECC 136
           W F   + KL  +C+  CC
Sbjct: 102 WIFGIHLCKLWLTCDVLCC 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,571
Number of Sequences: 438
Number of extensions: 4369
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)