Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30437
         (737 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3U134 Cluster: Activated spleen cDNA, RIKEN full-lengt...    34   4.2  
UniRef50_Q38CT1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  
UniRef50_Q2MHK7 Cluster: Taste receptor, type 2, member 1b; n=3;...    33   9.7  

>UniRef50_Q3U134 Cluster: Activated spleen cDNA, RIKEN full-length
           enriched library, clone:F830016D02 product:hypothetical
           protein, full insert sequence; n=2; Mus musculus|Rep:
           Activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830016D02 product:hypothetical protein,
           full insert sequence - Mus musculus (Mouse)
          Length = 121

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -2

Query: 196 IYIYVCVCVKYMAVCVMFSVLI 131
           IYIYVCVCVKY+   ++  ++I
Sbjct: 68  IYIYVCVCVKYILTIIILLIMI 89


>UniRef50_Q38CT1 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 141

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -3

Query: 198 VYIYMCVCVLNTWQCV*CFLY*FNVTFMH 112
           +YIYMCVCVL  W  +   L  FN+ F H
Sbjct: 37  IYIYMCVCVLYVWWSL---LAIFNLNFTH 62


>UniRef50_Q2MHK7 Cluster: Taste receptor, type 2, member 1b; n=3;
           Danio rerio|Rep: Taste receptor, type 2, member 1b -
           Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 331

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 187 IYIYSLFIVKL*LMLKVCGQIEKY*YCLSLILFVCNV 297
           +Y+++LF V L +++K+ G    Y Y +S   F C V
Sbjct: 255 VYLFNLFFVSLFILMKLIGAYITYQYLVSTFTFYCGV 291


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,582,655
Number of Sequences: 1657284
Number of extensions: 12549454
Number of successful extensions: 28619
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28190
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)