BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS30437 (737 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_03_0146 + 8883761-8883860,8886000-8886086,8886574-8886684,888... 29 3.9 04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89... 28 6.7 >05_03_0146 + 8883761-8883860,8886000-8886086,8886574-8886684, 8887021-8887121,8887208-8887258,8887347-8887496, 8887577-8887639,8887728-8887814,8887908-8888018, 8888097-8888387,8889372-8889815 Length = 531 Score = 29.1 bits (62), Expect = 3.9 Identities = 19/64 (29%), Positives = 31/64 (48%) Frame = +1 Query: 421 KTTNKKNFQKRNKEECKAVITFLKT*NNVLGNFRYMAFLPVHLYQAMFESRKARYQFF** 600 KTT ++N N+ + K V+T +T N + + + F P A+ E AR++ Sbjct: 365 KTTEQRNTNVINRTDYKCVMTMWRTRENYIPLYFKLDFCPFIHSTALSEVTNARFKRGVG 424 Query: 601 NTHS 612 THS Sbjct: 425 PTHS 428 >04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-898967, 899078-899160,899335-899485,899896-899952,900279-900479 Length = 393 Score = 28.3 bits (60), Expect = 6.7 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 384 TLIN*NYKFEHYYAYIVKDYFYNHRLRLDYITDK 283 +L N YK H + + Y +NH R DYI+DK Sbjct: 205 SLCNKQYKLAHEFESHLSSYDHNH--RKDYISDK 236 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,666,675 Number of Sequences: 37544 Number of extensions: 303796 Number of successful extensions: 508 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 498 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 506 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1945321620 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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