Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30437
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070628-1|AAL48099.1|  154|Drosophila melanogaster RE73432p pro...    29   8.7  
AL132792-2|CAB60031.1|  306|Drosophila melanogaster EG:BACR19J1....    29   8.7  
AE014298-100|AAF45544.1|  306|Drosophila melanogaster CG5254-PA ...    29   8.7  

>AY070628-1|AAL48099.1|  154|Drosophila melanogaster RE73432p
           protein.
          Length = 154

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
 Frame = -2

Query: 724 GLTRGPTTS--NYAIYNIARFDFYYTMLSFTVEVNREHLLSAYFIRKI------GTLLCG 569
           GL +G T +     ++N+  F FY+++ +   E    HL    F+RK+      GTL C 
Sbjct: 21  GLNKGITATMGRNGVFNMVYFGFYHSVKNVVPEYKESHL---EFLRKVTIGFLAGTLACF 77

Query: 568 IRTSLD 551
           +    D
Sbjct: 78  VNIPFD 83


>AL132792-2|CAB60031.1|  306|Drosophila melanogaster EG:BACR19J1.2
           protein.
          Length = 306

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
 Frame = -2

Query: 724 GLTRGPTTS--NYAIYNIARFDFYYTMLSFTVEVNREHLLSAYFIRKI------GTLLCG 569
           GL +G T +     ++N+  F FY+++ +   E    HL    F+RK+      GTL C 
Sbjct: 173 GLNKGITATMGRNGVFNMVYFGFYHSVKNVVPEYKESHL---EFLRKVTIGFLAGTLACF 229

Query: 568 IRTSLD 551
           +    D
Sbjct: 230 VNIPFD 235


>AE014298-100|AAF45544.1|  306|Drosophila melanogaster CG5254-PA
           protein.
          Length = 306

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
 Frame = -2

Query: 724 GLTRGPTTS--NYAIYNIARFDFYYTMLSFTVEVNREHLLSAYFIRKI------GTLLCG 569
           GL +G T +     ++N+  F FY+++ +   E    HL    F+RK+      GTL C 
Sbjct: 173 GLNKGITATMGRNGVFNMVYFGFYHSVKNVVPEYKESHL---EFLRKVTIGFLAGTLACF 229

Query: 568 IRTSLD 551
           +    D
Sbjct: 230 VNIPFD 235


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,773,451
Number of Sequences: 53049
Number of extensions: 587319
Number of successful extensions: 988
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)