Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30432
(668 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0059 - 11022306-11022578,11022812-11022881,11022966-110232... 58 5e-09
06_02_0049 - 10945765-10945893,10946042-10946110,10947278-10947946 57 1e-08
06_02_0053 - 10974209-10974229,10974562-10974621,10974708-109747... 55 6e-08
02_04_0478 - 23261273-23261530,23262243-23262312,23263304-23263953 51 1e-06
06_02_0051 - 10957857-10958127,10959791-10960035,10960160-109602... 48 5e-06
04_04_0286 - 24151135-24151392,24152261-24152330,24153468-24154096 48 9e-06
11_04_0088 + 13377605-13378237 43 3e-04
04_01_0091 + 971693-972327,973044-973368 42 6e-04
03_05_0532 - 25322822-25322932,25323018-25323050,25323187-253232... 38 0.007
06_02_0052 - 10964659-10964919,10964938-10965006,10965069-109651... 34 0.089
01_01_0352 + 2799748-2799865,2800368-2800412,2800890-2801121,280... 34 0.089
06_02_0058 - 11016680-11016730,11017298-11017594 34 0.12
07_03_1589 + 27948546-27948548,27948890-27948958,27949235-279493... 31 1.1
04_03_1017 + 21747044-21748051 31 1.1
11_06_0044 + 19562507-19562513,19562514-19562552,19564215-195643... 30 1.5
11_06_0042 + 19550260-19550278,19550418-19550530,19551841-195520... 30 1.5
02_04_0234 + 21141704-21141940,21142408-21142477,21142646-211428... 30 1.5
04_04_1351 - 32827136-32827984 30 1.9
07_03_0439 + 18212584-18213065,18214164-18215010 29 2.5
03_01_0109 - 863381-863575,863749-863795,863893-863980,864078-86... 29 2.5
10_08_0426 - 17817975-17818582,17819068-17819209,17819648-178197... 29 4.4
04_03_0215 + 12722394-12722581,12722992-12723071,12723315-127235... 29 4.4
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 28 5.9
05_07_0214 - 28451861-28453069 28 7.7
04_03_0214 + 12713865-12713973,12715780-12716011,12716556-127166... 28 7.7
>06_02_0059 -
11022306-11022578,11022812-11022881,11022966-11023254,
11023770-11024109
Length = 323
Score = 58.4 bits (135), Expect = 5e-09
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLK---ATVTEIEKEHNVKTKMVVADFS-----KGLEVYAH 416
A ELA RGLNVV++ R+P KL+ + H V+TK VV DFS +G + A
Sbjct: 61 ALELAGRGLNVVLVGRDPAKLRDVAGAIARSHSHHGVRTKTVVFDFSLVSTVQGEKAMAA 120
Query: 417 IEEELKDIPIGILVNNVGV 473
+ E ++ + +G++VNN GV
Sbjct: 121 LRETVEGLDVGVVVNNAGV 139
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 527 IVHVNVGAVTSMTRLVVKXMAXXGKGAVVNVSSGS 631
++ VN+ A+T +T V+ M G+GAVVN+ S S
Sbjct: 158 MIRVNMLALTKVTAAVLPGMVMRGRGAVVNIGSAS 192
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 196 LTKKFGSWAVVTGGTDGIG 252
L +++GSWAVVTG T GIG
Sbjct: 39 LRRRYGSWAVVTGPTSGIG 57
>06_02_0049 - 10945765-10945893,10946042-10946110,10947278-10947946
Length = 288
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEHNVKTKMVVADFS-----KGLEVYAHIEE 425
A ELARRGLN+V++ R+P L+ + H V+TK VV D S G E + E
Sbjct: 76 ALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLVATPHGDEPLRQLRE 135
Query: 426 ELKDIPIGILVNNVGV 473
++ + +G+L+NN GV
Sbjct: 136 TVEGLDVGVLMNNAGV 151
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2
Query: 527 IVHVNVGAVTSMTRLVVKXMAXXGKGAVVNVSSGSELQPLP 649
++ VN+ AVT +T V+ M G+GAVVN+ S S Q +P
Sbjct: 170 MMRVNLWAVTEVTAAVLPGMVERGRGAVVNIGSASS-QAIP 209
Score = 31.5 bits (68), Expect = 0.63
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 163 MPYFLPAEDQPLTKKFGSWAVVTGGTDGIG 252
+ + L + + L ++G+WAV+TG T G+G
Sbjct: 43 LAFSLHRQPKDLRSRYGAWAVITGPTSGMG 72
>06_02_0053 -
10974209-10974229,10974562-10974621,10974708-10974750,
10975818-10975903,10976405-10976474,10976604-10977265
Length = 313
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEHNVKTKMVVADFS-----KGLEVYAHIEE 425
A ELAR GLN+V++ R+P L+ + H VKTK VV D S G E + E
Sbjct: 75 ALELARHGLNLVLVGRDPAILREISGTVRSLHKVKTKTVVFDLSLVWTPDGDEPLRRLRE 134
Query: 426 ELKDIPIGILVNNVGV 473
++ + +G++VNN GV
Sbjct: 135 AVEGLDVGVVVNNAGV 150
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Frame = +2
Query: 527 IVHVNVGAVTSMTRLVVKXMAXXGKGAVVNV-SSGSELQP-LPL 652
+V VN+ AVT +T +V+ M G+GA+VN+ S+GSE P LPL
Sbjct: 169 MVRVNMSAVTEVTAVVLPGMVSRGRGAIVNIGSAGSEYIPTLPL 212
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 178 PAEDQPLTKKFGSWAVVTGGTDGIG 252
P +D L +++G WAVVTG T GIG
Sbjct: 49 PKDD--LRRRYGEWAVVTGPTSGIG 71
>02_04_0478 - 23261273-23261530,23262243-23262312,23263304-23263953
Length = 325
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEH-NVKTKMVVADFSK-GLEVYAH-IEEEL 431
A LA GL +V++ R+P+KL + EI + V+ + V DF+ GL + E +
Sbjct: 73 AFRLAASGLGLVLVGRSPDKLASVSEEIRGRYPRVEVRTFVLDFAADGLAAGVEGLREAI 132
Query: 432 KDIPIGILVNNVGVQYDYXXELGDL 506
+ + +G+LVNN GV Y Y L ++
Sbjct: 133 RGLEVGVLVNNAGVSYPYARYLHEV 157
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1
Query: 190 QPLTKKFGSWAVVTGGTDGIG 252
+PL +++G+WAVVTG TDGIG
Sbjct: 49 KPLRRRYGAWAVVTGATDGIG 69
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 527 IVHVNVGAVTSMTRLVVKXMAXXGKGAVVNVSSGS 631
++ VNV +T +T V+ M +GA+VN+ SGS
Sbjct: 165 LIRVNVEGLTRVTHAVLPAMVERKRGAIVNIGSGS 199
>06_02_0051 -
10957857-10958127,10959791-10960035,10960160-10960229,
10960319-10960986
Length = 417
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEH-NVKTKMVVADFS-----KGLEVYAHIE 422
A ELARRGLN+V++ R+P +L+ I H V+TK VV D S G + +
Sbjct: 75 ALELARRGLNLVLVGRDPARLREISGTIRSRHGRVQTKAVVFDLSLASTPDGDQPLRRLR 134
Query: 423 EELKDIPIGILVNN 464
E + + +G++VNN
Sbjct: 135 EAVAGLDVGVVVNN 148
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 202 KKFGSWAVVTGGTDGIG 252
+++G+WAV+TG T GIG
Sbjct: 55 RRYGAWAVITGPTSGIG 71
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 527 IVHVNVGAVTSMTRLVVKXMAXXGK-GAVVNV-SSGSELQP 643
+ VNV AVT +T V+ M G+ GAVVN+ S+ SE P
Sbjct: 170 MARVNVSAVTEVTAAVLPGMVERGRGGAVVNLGSAASEAIP 210
>04_04_0286 - 24151135-24151392,24152261-24152330,24153468-24154096
Length = 318
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEH-NVKTKMVVADFS-KGLEV-YAHIEEEL 431
A A G+++V++ R+P+KL A EI +H + + V DF+ +GL A + + +
Sbjct: 66 AFRFAGAGMSLVLVGRSPDKLAAVSGEIRGKHPRAEVRTFVLDFAAEGLAAKVAALGDSI 125
Query: 432 KDIPIGILVNNVGVQYDY 485
+ + +G+LVN+ G+ Y Y
Sbjct: 126 RGLDVGVLVNSAGMSYPY 143
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 190 QPLTKKFGSWAVVTGGTDGIG 252
+PL +++G WAVVTG TDGIG
Sbjct: 42 KPLRRRYGEWAVVTGATDGIG 62
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 527 IVHVNVGAVTSMTRLVVKXMAXXGKGAVVNVSSGS 631
++ +NV A+T +T V+ M +GA+VN+ SG+
Sbjct: 158 LIRLNVEALTRVTHAVLPGMVERKRGAIVNIGSGA 192
>11_04_0088 + 13377605-13378237
Length = 210
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEHNV-KTKMVVADFSK-------GLEV--- 407
A ELARRGL++V++ RNP KL E+ K + VV D + G E+
Sbjct: 58 ALELARRGLHLVLVGRNPGKLSGVCKEVRAAAPACKVRTVVFDLAAPGDDDVGGGELSRG 117
Query: 408 YAHIEEELKDIPIGILVNNVGVQY 479
A + ++ + +G+LVNN G Y
Sbjct: 118 VARVAAAVEGLDVGLLVNNAGATY 141
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 521 WE-IVHVNVGAVTSMTRLVVKXMAXXGKGAVVNVSSGSEL 637
WE ++ VNV A T + R +V MA G+GAVVNV SGS +
Sbjct: 155 WEAVLRVNVVAATRIARALVPAMAAKGRGAVVNVGSGSSV 194
Score = 35.1 bits (77), Expect = 0.051
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 196 LTKKFGSWAVVTGGTDGIG 252
L +++G WAVVTG TDGIG
Sbjct: 36 LCRRYGEWAVVTGATDGIG 54
>04_01_0091 + 971693-972327,973044-973368
Length = 319
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEH--NVKTKMVVADFS-----KGLEVYAHI 419
A ELARRG N+V++ + + L+ I + H V T+ VV D S G E +
Sbjct: 64 AMELARRGFNLVLLDLDRDNLREVSEAIREAHAGAVATRTVVFDLSTVGTGAGEEGMRRL 123
Query: 420 EEELKDIPIGILVNNVGV 473
E + + +G+LVNN V
Sbjct: 124 REAVDGVEVGMLVNNAAV 141
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 527 IVHVNVGAVTSMTRLVVKXMAXXGKGAVVNVSSGS 631
++ VN A+T++T V+ MA G+GA+VNV SGS
Sbjct: 160 MIRVNAMALTAVTAAVLPAMARRGRGAIVNVGSGS 194
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 139 LELVSSYLMPYFLPAEDQP--LTKKFGSWAVVTGGTDGIGNT 258
L +V L+PY +P L + +G WAVVTG T G+G +
Sbjct: 21 LTVVFLRLLPYLALYLRRPKDLRRCYGEWAVVTGPTTGLGRS 62
>03_05_0532 -
25322822-25322932,25323018-25323050,25323187-25323222,
25323301-25323336,25323431-25323479,25323671-25323762,
25323899-25323984,25324098-25324261,25325573-25325601,
25325697-25325807,25326471-25326512,25326597-25326647,
25326848-25326898,25327325-25327382,25327823-25327908,
25328008-25328056,25328155-25328273,25328504-25328590,
25328726-25328787,25329222-25329290,25329884-25330133
Length = 556
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEHNVKTKM-VVADFSKGLEVYAHIE 422
AKE + G NVVI SR+ E++++ VT+++KE + +V D +G +V A ++
Sbjct: 90 AKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQHVWGIVCDVREGKDVKALVD 144
>06_02_0052 -
10964659-10964919,10964938-10965006,10965069-10965138,
10965861-10966420
Length = 319
Score = 34.3 bits (75), Expect = 0.089
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +2
Query: 527 IVHVNVGAVTSMTRLVVKXMAXXGK-GAVVNV-SSGSELQP-LPL 652
+V VNV AVT +T V+ M G+ GAVVN+ S+ SE P LPL
Sbjct: 134 MVRVNVSAVTEVTAAVLPGMVARGRGGAVVNIGSAASESIPSLPL 178
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 196 LTKKFGSWAVVTGGTDGIG 252
L +++G WAVVTG T GIG
Sbjct: 52 LRRRYGEWAVVTGPTSGIG 70
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLK 326
A ELAR GLN+V++ R+P L+
Sbjct: 74 ALELARHGLNLVLVGRDPAILR 95
>01_01_0352 +
2799748-2799865,2800368-2800412,2800890-2801121,
2801242-2801321,2801417-2801570,2801655-2801733,
2801900-2801984,2802121-2802167,2802301-2802471
Length = 336
Score = 34.3 bits (75), Expect = 0.089
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEH-NVKTKMVVADFSKGLEVYAHIEE-ELK 434
++ A RG +V+I +RN E +I +E+ ++ D S V A ++
Sbjct: 65 SRVFAMRGAHVIIAARNTEAASVVRKKIIEENPKAHIDVLKLDLSSLKSVRAFADQFNSM 124
Query: 435 DIPIGILVNNVGVQY 479
++P+ IL+NN GV +
Sbjct: 125 NLPLNILINNAGVMF 139
>06_02_0058 - 11016680-11016730,11017298-11017594
Length = 115
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLK 326
A ELARRGLN+V++ R+P KL+
Sbjct: 77 ALELARRGLNLVLVGRDPAKLR 98
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 196 LTKKFGSWAVVTGGTDGIGNT 258
L +++G+WAV+TG T GIG +
Sbjct: 55 LRRRYGAWAVITGPTSGIGRS 75
>07_03_1589 +
27948546-27948548,27948890-27948958,27949235-27949335,
27949460-27950173,27951172-27951333,27951669-27952458
Length = 612
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 175 LPAEDQPLTKKFGSWAVVTGGTDGIGNTTPRSW 273
L AE + L K G AV+TGG GIG T + +
Sbjct: 49 LCAEVRSLVKLAGKVAVITGGASGIGKATAKEF 81
>04_03_1017 + 21747044-21748051
Length = 335
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 283 PRRASSLAXCYRYRPCRRSQRPTIRTFWSAADPRRAGSTASNKTKPTLKDSTASPEQSTT 104
PRRA+S Y P S+R + + PRRA S P+ + + +SP+ +
Sbjct: 126 PRRAASPD----YTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSPDYTPE 181
Query: 103 QPTNR 89
P R
Sbjct: 182 SPPRR 186
>11_06_0044 +
19562507-19562513,19562514-19562552,19564215-19564327,
19565175-19565385,19565476-19565713,19565878-19566031,
19569193-19569546
Length = 371
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/104 (25%), Positives = 50/104 (48%)
Frame = +3
Query: 207 VRIVGRCDRRHGRYR*HXAKELARRGLNVVIISRNPEKLKATVTEIEKEHNVKTKMVVAD 386
VR+VG C + + + + +R L+ ++ +P+K + E+ E +K ++ +
Sbjct: 94 VRLVGVCVENQEKLLVY--EYMPKRSLDTILF--DPDKSR----ELSWEKRLK---IIIE 142
Query: 387 FSKGLEVYAHIEEELKDIPIGILVNNVGVQYDYXXELGDLXCRK 518
++GLE Y H E LK I + NN+ + D ++ D K
Sbjct: 143 IARGLE-YLHEESRLKIIHRDLKANNILLDSDLTPKISDFGLAK 185
>11_06_0042 +
19550260-19550278,19550418-19550530,19551841-19552051,
19552164-19552401,19552662-19552752,19552883-19552917,
19554179-19554452
Length = 326
Score = 30.3 bits (65), Expect = 1.5
Identities = 27/104 (25%), Positives = 46/104 (44%)
Frame = +3
Query: 207 VRIVGRCDRRHGRYR*HXAKELARRGLNVVIISRNPEKLKATVTEIEKEHNVKTKMVVAD 386
VR++G C + + + + + R L+ I R+ K E+ E K ++ +
Sbjct: 85 VRVLGVCVEKQEKLLVY--EYMPNRSLDTFIFDRDKSK------ELGWEKRFK---IIIE 133
Query: 387 FSKGLEVYAHIEEELKDIPIGILVNNVGVQYDYXXELGDLXCRK 518
++GLE Y H E LK I + NN+ + D E+ D K
Sbjct: 134 IARGLE-YLHEESRLKIIHRDLKANNILLDSDLTPEISDFGLAK 176
>02_04_0234 +
21141704-21141940,21142408-21142477,21142646-21142839,
21142928-21143100,21144233-21144302
Length = 247
Score = 30.3 bits (65), Expect = 1.5
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +3
Query: 177 ARRGSAADQKVRIVGRCDRRHGRYR*HXAKELARRGLNVVIISRNPEKLKATVTEIEKEH 356
A R +AA + ++ R GR A ELARRG VV R+ + +++ EI
Sbjct: 14 AARAAAAGPRTVLITGVSRGLGRA---LALELARRGHAVVGCGRSADHVRSLEAEIATP- 69
Query: 357 NVKTKMVVADF--SKGLEVYAHIEEELKDIPIGILVNNVG 470
+ + VAD + A E K +P I+VNN G
Sbjct: 70 -ARHFLTVADVRSDSNMAELAKAVVEKKQVP-DIIVNNAG 107
>04_04_1351 - 32827136-32827984
Length = 282
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 199 SAADPRRAGSTASNKTKPTLKDSTASPEQSTTQPTNRLQLG 77
S + P+R G + PT ST +P S T P + L+LG
Sbjct: 171 SPSPPKRHGGRKACPPSPTPTPSTPTPSSSDTCPIDALKLG 211
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 238 CRRSQRPTIRTFWSAADPRRAGSTASNKTKPTLKDSTASPEQSTTQP 98
C PT+ T W AA G+ A++ ST P ++ +P
Sbjct: 22 CVHPPSPTVSTHWDAASHEARGAAAASSPTSPRAASTNPPSATSAEP 68
>03_01_0109 -
863381-863575,863749-863795,863893-863980,864078-864159,
864264-864420,864501-864583,864724-864955,865032-865146
Length = 332
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKE-HNVKTKMVVADFSKGLEVYAHIEEELK- 434
A+ LA+RG VVI +RN + + I E ++ D S V A + L
Sbjct: 49 ARVLAKRGARVVIPARNVKAAEDMRARIRGECPGADVLVLPLDLSSLASVRAFADRFLSL 108
Query: 435 DIPIGILVNNVG 470
+P+ +L+NN G
Sbjct: 109 GLPLHLLINNAG 120
>10_08_0426 -
17817975-17818582,17819068-17819209,17819648-17819745,
17820070-17821897,17822331-17822738,17822891-17822943,
17823461-17823877,17824401-17824605
Length = 1252
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 309 NPEKLKATVTEIEKEHNVKTKMVVADFSKGLEVYAH 416
N + L+++ TE+E+EH K V D + + V H
Sbjct: 594 NEKHLESSDTEVEEEHKTKASDVSLDLQEDISVDVH 629
>04_03_0215 +
12722394-12722581,12722992-12723071,12723315-12723532,
12724084-12724168,12724679-12724725,12725378-12725536
Length = 258
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 279 RGLNVVIISRNPEKLKATVTEIEKE-HNVKTKMVVADFSKGLEVYAHIEE-ELKDIPIGI 452
RGL+VV+ RN EI ++ K +M+ D S V E ++P+ I
Sbjct: 2 RGLHVVMGVRNSSAGARVRDEIVRQLPAAKIEMLDLDLSLMSSVRRFAENFNALNLPLNI 61
Query: 453 LVNNVGVQY 479
LVNN G+ +
Sbjct: 62 LVNNAGIAF 70
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 54 VFHVVNSSPSCNRFVGCVVDCSGLAVESFRVGFVLFDAVLPARRGSAA 197
V+ + + P+ R + C G A E+F+ GF L A L A R +AA
Sbjct: 147 VYCLSRAVPAAGRLPRALAACGGGAAEAFKGGFAL--AGLAAARSAAA 192
>05_07_0214 - 28451861-28453069
Length = 402
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 207 VRIVGRCDRRHGRYR*HXAKELARRGLNVVIISRNPEKLKATVTEIEKE 353
VR VGR RRH R++ H ++ A N++ + L++ V +E
Sbjct: 327 VRPVGRFLRRHARHQHHGTRDAAWLAGNILEVRDRVSALRSLVVMFPEE 375
>04_03_0214 +
12713865-12713973,12715780-12716011,12716556-12716635,
12716930-12717083,12717213-12717291,12717654-12717738,
12718420-12718466,12720123-12720281
Length = 314
Score = 27.9 bits (59), Expect = 7.7
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 270 LARRGLNVVIISRNPEKLKATVTEIEKE-HNVKTKMVVADFSKGLEV--YAHIEEELKDI 440
L RG+ VV+ RN EI K+ + K +++ D S V +A I + L ++
Sbjct: 50 LVMRGVYVVMGVRNLSAGARVRDEILKQVPSAKMEILNLDLSSMSSVRRFAEIFKAL-NL 108
Query: 441 PIGILVNNVGV 473
P+ IL+NN GV
Sbjct: 109 PLNILINNAGV 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,361,870
Number of Sequences: 37544
Number of extensions: 354289
Number of successful extensions: 1238
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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