Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30432
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    28   0.31 
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       25   1.6  
Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    25   2.9  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   3.8  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   3.8  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.0  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   6.6  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -2

Query: 343 ISVTVAFNFSGFLLMMTTLRPR 278
           + +TVA NF GFL+ +TTL PR
Sbjct: 184 VVLTVAANFGGFLISLTTL-PR 204


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 16/66 (24%), Positives = 30/66 (45%)
 Frame = -1

Query: 239 VPPVTTAHDPNFLVSG*SSAGRKYGIK*DETNSKGLHSESRAIDNTANKPITTRRTINNV 60
           + P+      ++L  G S+A R       + N   LH   RA+   A++   T+  +++ 
Sbjct: 152 ISPIMVQSLLSYLFDGASNATRLEMESVLQLNMNDLHDIERALTPQADQEPITKNKLDSA 211

Query: 59  KNIFRS 42
             IF+S
Sbjct: 212 SQIFKS 217


>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 321 LKATVTEIEKEHNVKTKMVVADFSKGLEVYAHIEEELKD 437
           LKA+ T  EKE N  TK+     S+  + Y  +++  ++
Sbjct: 41  LKASTTWNEKECNGSTKLAACVVSEHEQAYRELKQRCQE 79


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 127 LWSPLELVSSYL---MPYFLPAEDQPLTKKFGSW 219
           +W P  +  S+    + YF P ++Q    KFGSW
Sbjct: 137 VWKPPAIYKSFCEIDVEYF-PFDEQTCFMKFGSW 169


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 399 LEVYAHIEEELKDIPIGILVNNVGVQYDYXXELGD 503
           LE Y ++  +  D+ + + +  VG  +DY   LG+
Sbjct: 796 LEQYFNVVHKALDMYLSVAILRVGKGFDYSQVLGE 830


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
 Frame = +1

Query: 127 LWSPLELVSSYL---MPYFLPAEDQPLTKKFGSWAVVTGGTDGIGNTTPRSWHDAASTWS 297
           LW P  +  S     + YF P + Q    KFGSW    G    +     +++ D +  W 
Sbjct: 140 LWVPPAIYQSSCTIDVTYF-PFDQQTCIMKFGSW-TFNGDQVSLALYNNKNFVDLSDYWK 197

Query: 298 S 300
           S
Sbjct: 198 S 198


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -2

Query: 289  LRPRRASSLAXCYRYRPCRRSQRPTIRTFW 200
            LR +       CYRY P    +   I+ +W
Sbjct: 1059 LRHKLVERFLPCYRYLPDPVQENDCIKLYW 1088


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,670
Number of Sequences: 2352
Number of extensions: 12315
Number of successful extensions: 38
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)