Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30432
(668 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 26 0.37
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 1.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.0
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 2.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.5
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.5
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 3.5
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 3.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.6
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 6.1
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 21 8.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 8.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 8.0
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.8 bits (54), Expect = 0.37
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Frame = +1
Query: 121 DSLWSPLELVSSYL---MPYFLPAEDQPLTKKFGSWAVVTGGTDGIGNTTPRSWHDAAST 291
D LW P + S + YF P + Q KFGSW G + +++ D +
Sbjct: 138 DVLWVPPAIYQSSCTIDVTYF-PFDQQTCIMKFGSW-TFNGDQVSLALYNNKNFVDLSDY 195
Query: 292 WSSSAETLKN 321
W S + N
Sbjct: 196 WKSGTWDIIN 205
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +1
Query: 127 LWSPLELVSSYL---MPYFLPAEDQPLTKKFGSW 219
+W P + S+ + YF P ++Q KFGSW
Sbjct: 134 VWKPPAIYKSFCEIDVEYF-PFDEQTCFMKFGSW 166
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.0
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 196 AADPR--RAGSTASNKTKPTLKDSTASPEQSTTQPTNRLQL 80
A+ PR A +T+S T P STA+ + P+N ++L
Sbjct: 824 ASSPRYLSAAATSSTSTSPRPASSTAATLVLSGCPSNMMEL 864
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +1
Query: 121 DSLWSPLELVSSYL---MPYFLPAEDQPLTKKFGSW 219
D W P + S + YF P ++Q KFGSW
Sbjct: 145 DVSWKPPAIYKSSCEINVEYF-PFDEQSCIMKFGSW 179
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 172 FLPAEDQPLTKKFGSW 219
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 172 FLPAEDQPLTKKFGSW 219
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 172 FLPAEDQPLTKKFGSW 219
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 172 FLPAEDQPLTKKFGSW 219
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 172 FLPAEDQPLTKKFGSW 219
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 172 FLPAEDQPLTKKFGSW 219
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 172 FLPAEDQPLTKKFGSW 219
+ P +DQ KFGSW
Sbjct: 185 WFPFDDQHCDMKFGSW 200
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 172 FLPAEDQPLTKKFGSW 219
+ P +DQ KFGSW
Sbjct: 185 WFPFDDQHCDMKFGSW 200
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 172 FLPAEDQPLTKKFGSW 219
+ P ++Q KFGSW
Sbjct: 155 YFPFDEQTCVMKFGSW 170
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +1
Query: 127 LWSPLELVSSYL---MPYFLPAEDQPLTKKFGSW 219
LW+P + S + YF P + Q KFGSW
Sbjct: 134 LWTPPAIFKSSCEIDVRYF-PFDQQTCFMKFGSW 166
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 172 FLPAEDQPLTKKFGSW 219
+ P +DQ KFGSW
Sbjct: 154 WFPFDDQRCEMKFGSW 169
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 172 FLPAEDQPLTKKFGSW 219
+ P ++Q KFGSW
Sbjct: 159 YFPFDEQTCVLKFGSW 174
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 6.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 183 GGQEVRHQIRRNQ--L*RTPQRVQSNRQHSQQ 94
GG E HQ +++ + PQ+ QS +Q SQQ
Sbjct: 16 GGVEHPHQHQQHYGAAVQVPQQTQSVQQQSQQ 47
Score = 21.4 bits (43), Expect = 8.0
Identities = 14/59 (23%), Positives = 24/59 (40%)
Frame = +2
Query: 281 RPQRGHHQQKP*KIESNGH*NRKRTQRENQDGGC*LQ*RP*SVRSYRRGTQRHSYRYTS 457
+PQ+G HQ + + H Q++ Q Q +P ++ Q+H TS
Sbjct: 180 QPQQGQHQSQAQQQHLQAHEQHMMYQQQQQSQAASQQSQPGMHPRQQQQAQQHQGVVTS 238
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 217 WAVVTGGTDGIGNTT 261
W + TG T GIGNTT
Sbjct: 142 WVLDTG-TIGIGNTT 155
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 199 SAADPRRAGSTASNKTKPTLK 137
SA ST+ NKT PT+K
Sbjct: 68 SAGSIPGVNSTSENKTFPTIK 88
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 199 SAADPRRAGSTASNKTKPTLK 137
SA ST+ NKT PT+K
Sbjct: 68 SAGSIPGVNSTSENKTFPTIK 88
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,841
Number of Sequences: 438
Number of extensions: 3731
Number of successful extensions: 28
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -