Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30432
(668 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g24470.1 68414.m03082 short-chain dehydrogenase/reductase (SD... 63 1e-10
At1g67730.1 68414.m07729 b-keto acyl reductase, putative (GLOSSY... 60 1e-09
At5g02540.1 68418.m00188 short-chain dehydrogenase/reductase (SD... 41 9e-04
At2g37540.1 68415.m04604 short-chain dehydrogenase/reductase (SD... 41 9e-04
At4g09750.1 68417.m01601 short-chain dehydrogenase/reductase (SD... 39 0.003
At1g10310.1 68414.m01161 short-chain dehydrogenase/reductase (SD... 39 0.003
At1g49670.1 68414.m05570 ARP protein (REF) identical to ARP prot... 36 0.032
At5g50130.2 68418.m06208 short-chain dehydrogenase/reductase (SD... 35 0.056
At5g50130.1 68418.m06209 short-chain dehydrogenase/reductase (SD... 35 0.056
At4g11410.1 68417.m01839 short-chain dehydrogenase/reductase (SD... 34 0.074
At4g24050.1 68417.m03455 short-chain dehydrogenase/reductase (SD... 31 0.52
At1g64590.1 68414.m07321 short-chain dehydrogenase/reductase (SD... 31 0.52
At5g61830.1 68418.m07758 short-chain dehydrogenase/reductase (SD... 30 1.2
At5g10050.1 68418.m01164 short-chain dehydrogenase/reductase (SD... 30 1.2
At4g23430.2 68417.m03378 short-chain dehydrogenase/reductase (SD... 30 1.2
At4g23430.1 68417.m03377 short-chain dehydrogenase/reductase (SD... 30 1.2
At1g54870.1 68414.m06265 short-chain dehydrogenase/reductase (SD... 29 2.8
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containi... 29 2.8
At4g23420.2 68417.m03376 short-chain dehydrogenase/reductase (SD... 29 3.7
At4g23420.1 68417.m03375 short-chain dehydrogenase/reductase (SD... 29 3.7
At5g65205.1 68418.m08201 short-chain dehydrogenase/reductase (SD... 28 4.9
At4g13750.1 68417.m02134 expressed protein 28 4.9
At5g51030.1 68418.m06326 short-chain dehydrogenase/reductase (SD... 28 6.5
At3g01310.1 68416.m00042 expressed protein similar to unknown pr... 28 6.5
At5g61850.1 68418.m07760 floral meristem identity control protei... 27 8.5
At3g49055.1 68416.m05359 hypothetical protein 27 8.5
At3g05260.1 68416.m00574 short-chain dehydrogenase/reductase (SD... 27 8.5
>At1g24470.1 68414.m03082 short-chain dehydrogenase/reductase (SDR)
family protein similar to b-keto acyl reductase
GI:2586127 from [Hordeum vulgare]
Length = 312
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEH-NVKTKMVVADFSKGLEVYAHIEEELKD 437
A ELA+ GLN++++SRN KL++ + ++E ++K K++ DFS Y IEE +K
Sbjct: 69 AHELAKHGLNLILVSRNLSKLESVSDDFQQEFPHIKIKIIPFDFSSE-GGYGAIEEGIKG 127
Query: 438 IPIGILVNNVGVQY 479
+ +GIL+NNVG+ Y
Sbjct: 128 LEVGILINNVGITY 141
Score = 33.9 bits (74), Expect = 0.098
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 202 KKFGSWAVVTGGTDGIG 252
K++GSWA+VTG T+GIG
Sbjct: 49 KRYGSWAMVTGATEGIG 65
Score = 33.9 bits (74), Expect = 0.098
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +2
Query: 524 EIVHVNVGAVTSMTRLVVKXMAXXGKGAVVNVSSGS 631
+I+ VN+ A T +TR ++ M +GA+VN+SSG+
Sbjct: 157 KILRVNLEATTWVTRSLIGPMLHRRRGAIVNISSGA 192
>At1g67730.1 68414.m07729 b-keto acyl reductase, putative (GLOSSY8)
similar to b-keto acyl reductase GI:2586127 from
[Hordeum vulgare]
Length = 318
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEHN-VKTKMVVADFSKGL-EVYAHIEEELK 434
A +LA++GLN+++++RNP+KLK I +++ + VV DFS + E I+E ++
Sbjct: 68 AFQLAQKGLNLILVARNPDKLKDVSDSIRSKYSQTQILTVVMDFSGDIDEGVKRIKESIE 127
Query: 435 DIPIGILVNNVGVQYDY 485
+ +GIL+NN G+ Y Y
Sbjct: 128 GLDVGILINNAGMSYPY 144
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +1
Query: 145 LVSSYLMPYFLPAEDQPLTKKFGSWAVVTGGTDGIG 252
L+ S+ + + P+++ +++GSWA++TG TDGIG
Sbjct: 32 LLRSFYIYFLRPSKN---LRRYGSWAIITGPTDGIG 64
Score = 31.5 bits (68), Expect = 0.52
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 527 IVHVNVGAVTSMTRLVVKXMAXXGKGAVVNVSSGS 631
++ +NV T +T+ V+ M KGA++N+ SG+
Sbjct: 159 LIKINVEGTTKVTQAVLPNMLKRKKGAIINMGSGA 193
>At5g02540.1 68418.m00188 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
Short-chain dehydrogenase/reductase (SDR) superfamily
Length = 331
Score = 40.7 bits (91), Expect = 9e-04
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEH-NVKTKMVVADFSKGLEVYAHIEE-ELK 434
A+ L++RG +VVI +RN + TEI +++ N + ++ D S + A + E
Sbjct: 50 ARVLSKRGAHVVIGARNMGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHAL 109
Query: 435 DIPIGILVNNVGVQY 479
+P+ +L+NN GV +
Sbjct: 110 HLPLNLLINNAGVMF 124
>At2g37540.1 68415.m04604 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
Short-chain dehydrogenase/reductase (SDR) superfamily
Length = 321
Score = 40.7 bits (91), Expect = 9e-04
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEI-EKEHNVKTKMVVADFSKGLEVYAHIEEELK- 434
A+ LA RG +V+I +RNP+ + I + N + + D S V + +++ L
Sbjct: 50 ARVLAMRGAHVIIAARNPKAANESKEMILQMNPNARVDYLQIDVSSIKSVRSFVDQFLAL 109
Query: 435 DIPIGILVNNVGVQY 479
++P+ IL+NN GV +
Sbjct: 110 NVPLNILINNAGVMF 124
>At4g09750.1 68417.m01601 short-chain dehydrogenase/reductase (SDR)
family protein similar to androgen-regulated short-chain
dehydrogenase/reductase 1 GI:9622124 from [Homo sapiens]
Length = 322
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEH-NVKTKMVVADFSKGLEVYAHIEE-ELK 434
A+ LA RG V ++ RN E+ + +++I+ N + V D S E+ + K
Sbjct: 60 AEGLASRGATVYMVCRNKERGQEALSKIQTSTGNQNVYLEVCDLSSVNEIKSFASSFASK 119
Query: 435 DIPIGILVNNVGV 473
D+P+ +LVNN G+
Sbjct: 120 DVPVHVLVNNAGL 132
>At1g10310.1 68414.m01161 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
short-chain dehydrogenase/reductase (SDR) superfamily
Length = 242
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEHNVKTKMVVADFSKGLEVYAHIEEELKDI 440
A ELA+RG V+ +R+ EKL A +E+ N + +E AH E K +
Sbjct: 34 ALELAKRGHTVIGCARSQEKLTALQSELSSSTNHLLLTADVKSNSSVEEMAHTIVEKKGV 93
Query: 441 PIGILVNNVG 470
P I+VNN G
Sbjct: 94 P-DIIVNNAG 102
>At1g49670.1 68414.m05570 ARP protein (REF) identical to ARP protein
GB:CAA89858 GI:886434 from [Arabidopsis thaliana];
contains Pfam profile PF00107: oxidoreductase,
zinc-binding dehydrogenase family
Length = 629
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +2
Query: 512 SKXWE-IVHVNVGAVTSMTRLVVKXMAXXGK-GAVVNVSSGSELQPLPLD 655
SK W+ ++V++ AV T+L +K M K G ++N+ S + L P+P+D
Sbjct: 116 SKSWKHTINVDLIAVVEGTQLAIKAMKAKQKPGVIINMGSAAGLYPMPVD 165
>At5g50130.2 68418.m06208 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
Short-chain dehydrogenase/reductase (SDR) superfamily
Length = 277
Score = 34.7 bits (76), Expect = 0.056
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEHNVKTKMVV--ADFSKGLEVYAHIEEEL- 431
A+ LA+RG+ VV+ R+ +K + I +E N + +++ D S V + L
Sbjct: 53 ARVLAKRGVRVVMAVRDMKKAEMVKERIIRE-NPEADIILFEIDLSSLSSVARFCSQFLS 111
Query: 432 KDIPIGILVNNVGV 473
+D+P+ IL+NN GV
Sbjct: 112 QDLPLNILINNAGV 125
>At5g50130.1 68418.m06209 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
Short-chain dehydrogenase/reductase (SDR) superfamily
Length = 339
Score = 34.7 bits (76), Expect = 0.056
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEHNVKTKMVV--ADFSKGLEVYAHIEEEL- 431
A+ LA+RG+ VV+ R+ +K + I +E N + +++ D S V + L
Sbjct: 53 ARVLAKRGVRVVMAVRDMKKAEMVKERIIRE-NPEADIILFEIDLSSLSSVARFCSQFLS 111
Query: 432 KDIPIGILVNNVGV 473
+D+P+ IL+NN GV
Sbjct: 112 QDLPLNILINNAGV 125
>At4g11410.1 68417.m01839 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
Short-chain dehydrogenase/reductase (SDR) superfamily
Length = 317
Score = 34.3 bits (75), Expect = 0.074
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 270 LARRGLNVVIISRNPEKLKATVTEIEKE-HNVKTKMVVADFSKGLEVYAHIEE-ELKDIP 443
LA RG++VV+ RN + +I KE K ++ D S V + E + D+P
Sbjct: 49 LALRGVHVVMAVRNTDSGNQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASEYQSLDLP 108
Query: 444 IGILVNNVGV 473
+ +L+NN G+
Sbjct: 109 LNLLINNAGI 118
>At4g24050.1 68417.m03455 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
Short-chain dehydrogenase/reductase (SDR) superfamily
Length = 332
Score = 31.5 bits (68), Expect = 0.52
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEHNVKTKMVVA--DFSKGLEVYAHIEE-EL 431
A+ LA+RG ++ +RN + + I E +T++VV D S V + + E
Sbjct: 51 ARVLAKRGARLIFPARNVKAAEEAKERIVSEFP-ETEIVVMKLDLSSIASVRNFVADFES 109
Query: 432 KDIPIGILVNNVG 470
D+P+ +L+NN G
Sbjct: 110 LDLPLNLLINNAG 122
>At1g64590.1 68414.m07321 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
short-chain dehydrogenase/reductase (SDR) superfamily
Length = 334
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEH-NVKTKMVVADFSKGLEVYAHIEE-ELK 434
A+ LA+RG +V+ +R+ + + T I E + + ++ D S V +++ E
Sbjct: 51 ARVLAKRGARLVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESL 110
Query: 435 DIPIGILVNNVG 470
++P+ IL+NN G
Sbjct: 111 NLPLNILINNAG 122
>At5g61830.1 68418.m07758 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 316
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEK-LKATVTEIEKEHNVKT---KMVVADFSKGLEVYAHIEEE 428
A++LA GL VV+ +RN L+A + +E +K ++ V D S E +++
Sbjct: 53 ARQLAVHGLTVVLTARNVNAGLEAVKSLRHQEEGLKVYFHQLDVTDSSSIREFGCWLKQT 112
Query: 429 LKDIPIGILVNNVGVQYD 482
+ I LVNN GV Y+
Sbjct: 113 FGGLDI--LVNNAGVNYN 128
>At5g10050.1 68418.m01164 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 279
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKEHNVKTKMVVADFSKGLEVYAHIEEELKDI 440
A+E +G VV SR+ ++T+T++E++ + K + D V + E +
Sbjct: 25 AREFTEKGCRVVATSRS----RSTMTDLEQDSRLFVKEL--DVQSDQNVSKVLSEVIDKF 78
Query: 441 -PIGILVNNVGVQ 476
I +LVNN GVQ
Sbjct: 79 GKIDVLVNNAGVQ 91
>At4g23430.2 68417.m03378 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
Short-chain dehydrogenase/reductase (SDR) superfamily;
contains Pfam PF00106: oxidoreductase, short chain
dehydrogenase/reductase family
Length = 322
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKE-HNVKTKMVVADFSKGLEVYAHIEE-ELK 434
A+ L+ RG++VV+ RN + +I K+ K ++ D S V E +
Sbjct: 46 ARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKST 105
Query: 435 DIPIGILVNNVGV 473
+P+ +L+NN G+
Sbjct: 106 GLPLNLLINNAGI 118
>At4g23430.1 68417.m03377 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
Short-chain dehydrogenase/reductase (SDR) superfamily;
contains Pfam PF00106: oxidoreductase, short chain
dehydrogenase/reductase family
Length = 320
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKE-HNVKTKMVVADFSKGLEVYAHIEE-ELK 434
A+ L+ RG++VV+ RN + +I K+ K ++ D S V E +
Sbjct: 46 ARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKST 105
Query: 435 DIPIGILVNNVGV 473
+P+ +L+NN G+
Sbjct: 106 GLPLNLLINNAGI 118
>At1g54870.1 68414.m06265 short-chain dehydrogenase/reductase (SDR)
family protein C-terminal similar to dormancy related
protein GI:1220178 from [Trollius ledebourii]
Length = 288
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 166 PYFLPAEDQPLTKKFGSWAVVTGGTDGIG 252
P F ++ QP K G A++TGG GIG
Sbjct: 22 PQFSSSDYQPSNKLRGKVALITGGDSGIG 50
>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing
protein ESTs gb|F20110 and gb|F20109 come from this gene;
contains Pfam profile PF00515: TPR Domain
Length = 1558
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = -2
Query: 199 SAADPRRAGSTA-----SNKTKPTLKDSTASPEQSTTQPTNRLQLGEL-LTT*KTYLDRF 38
S + PRRA A +N TKP LK S A+ STT + L E+ L T L
Sbjct: 1213 SKSSPRRALKNAEIDVSTNTTKPQLKASGAAAVTSTTLASKSLSYKEVALAPPGTVLKPM 1272
Query: 37 LERL 26
LE+L
Sbjct: 1273 LEKL 1276
>At4g23420.2 68417.m03376 short-chain dehydrogenase/reductase (SDR)
family protein similar to WW-domain oxidoreductase [Mus
musculus] GI:6934274, WW domain-containing
oxidoreductase isoform FORII [Homo sapiens] GI:15667686;
contains Pfam PF00106: oxidoreductase, short chain
dehydrogenase/reductase family
Length = 316
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKE-HNVKTKMVVADFSKGLEVYAHIEEELKD 437
A+ LA RG++VV+ RN +I K+ K ++ + S +E E K
Sbjct: 46 ARVLALRGVHVVMAVRNTGAGAKVKEDIVKQVPGAKVDVMELELSS-MESVRKFASEYKS 104
Query: 438 --IPIGILVNNVGV 473
+P+ +L+NN G+
Sbjct: 105 AGLPLNLLINNAGI 118
>At4g23420.1 68417.m03375 short-chain dehydrogenase/reductase (SDR)
family protein similar to WW-domain oxidoreductase [Mus
musculus] GI:6934274, WW domain-containing
oxidoreductase isoform FORII [Homo sapiens] GI:15667686;
contains Pfam PF00106: oxidoreductase, short chain
dehydrogenase/reductase family
Length = 316
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 261 AKELARRGLNVVIISRNPEKLKATVTEIEKE-HNVKTKMVVADFSKGLEVYAHIEEELKD 437
A+ LA RG++VV+ RN +I K+ K ++ + S +E E K
Sbjct: 46 ARVLALRGVHVVMAVRNTGAGAKVKEDIVKQVPGAKVDVMELELSS-MESVRKFASEYKS 104
Query: 438 --IPIGILVNNVGV 473
+P+ +L+NN G+
Sbjct: 105 AGLPLNLLINNAGI 118
>At5g65205.1 68418.m08201 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 285
Score = 28.3 bits (60), Expect = 4.9
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +3
Query: 186 GSAADQK-VRIVGRCDRRHGRYR*HXAKELARRGLNVVIISRNPEKLKATVTEIEKEHNV 362
GS++D+ V ++ C + G A+E + G VV SR+ + T+TE+EK+
Sbjct: 2 GSSSDETPVVLITGCSQ--GGIGHALAREFSANGCRVVATSRSQK----TMTELEKDSKF 55
Query: 363 KTKMVVADFSKGL-EVYAHIEEELKDIPIGILVNNVGVQ 476
+ + + + +V + + ++ I + LVNN GVQ
Sbjct: 56 FVQELDVQSEQSVSKVVSKVIDKFGQIDV--LVNNAGVQ 92
>At4g13750.1 68417.m02134 expressed protein
Length = 2137
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 105 VVDCSGLAVESFRVGFVLFDAVLPARRGSAADQKVRIVGRCDRRHGRYR*HXA 263
++DC G FR ++ D +LP R D R++ C++ R H A
Sbjct: 415 LLDCLGYLPGEFRS--LVVDILLPGLRSVVKDAPTRVLSACEQTEQRIMLHDA 465
>At5g51030.1 68418.m06326 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 314
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +3
Query: 264 KELARRGLNVVIISRNPEKLKATVTEIEKEHNVKT---KMVVADFSKGLEVYAHIEEELK 434
++LA GL V++ SR+ E + +I +E ++ + D S E I+E+
Sbjct: 55 RQLAGHGLTVILTSRD-ENVGVEAAKILQEGGFNVDFHRLDILDSSSIQEFCEWIKEKYG 113
Query: 435 DIPIGILVNNVGVQYD 482
I + L+NN GV Y+
Sbjct: 114 FIDV--LINNAGVNYN 127
>At3g01310.1 68416.m00042 expressed protein similar to unknown protein
GB:BAA24863 [Homo sapiens], unknown protein GB:BAA20831
[Homo sapiens], unknown protein GB:AAB42264
[Caenorhabditis elegans]
Length = 1056
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/91 (23%), Positives = 40/91 (43%)
Frame = +3
Query: 108 VDCSGLAVESFRVGFVLFDAVLPARRGSAADQKVRIVGRCDRRHGRYR*HXAKELARRGL 287
+D GL E F+V +L D V+P G QK++I + RR + L
Sbjct: 751 LDLKGLD-ELFKVAQLLADGVIPNEYGINPQQKLKIGSKIARRLMGKILIDLRNTREEAL 809
Query: 288 NVVIISRNPEKLKATVTEIEKEHNVKTKMVV 380
+V + + E++ + ++ N + K+ +
Sbjct: 810 SVAELKESQEQVLSLSASQREDRNSQPKLFI 840
>At5g61850.1 68418.m07760 floral meristem identity control protein
LEAFY (LFY) identical to PIR|B38104 LFY floral meristem
identity control protein, splice form 2 - Arabidopsis
thaliana; contains Pfam profile PF01698: Floricaula /
Leafy protein
Length = 420
Score = 27.5 bits (58), Expect = 8.5
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +1
Query: 130 WSPLELVSSYLMPYFLPAEDQPLTKKFGSWAVVTGGTDGIGNTTPRSWHDAA--STWSSS 303
W+P + P P + QP+T + ++ + GG +G+ ++ AA + +
Sbjct: 13 WNPTRALVQAPPPVPPPLQQQPVTPQTAAFGMRLGGLEGLFGPYGIRFYTAAKIAELGFT 72
Query: 304 AETLKN*KQRSLKSKKNTT*KP-RWWLLTSVK-ALKCTLISKR 426
A TL K L+ N+ RW LL + +K + ++R
Sbjct: 73 ASTLVGMKDEELEEMMNSLSHIFRWELLVGERYGIKAAVRAER 115
>At3g49055.1 68416.m05359 hypothetical protein
Length = 480
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +3
Query: 300 ISRNPEKLKATVTEIEKEHNVKTKMV--VADFSKGLE 404
+ R+ E K TV+E+E E KTK++ +AD+ + +E
Sbjct: 86 MKRDLEVSKETVSELEGEAKEKTKLLSDIADYVRSME 122
>At3g05260.1 68416.m00574 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
short-chain dehydrogenase/reductase (SDR) superfamily
Length = 289
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 166 PYFLPAEDQPLTKKFGSWAVVTGGTDGIG 252
P F + +P K G A+VTGG GIG
Sbjct: 24 PEFSSSNYKPSNKLHGKVALVTGGDSGIG 52
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,314,060
Number of Sequences: 28952
Number of extensions: 259494
Number of successful extensions: 870
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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