Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30428
         (385 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68227-10|CAA92515.1|   95|Caenorhabditis elegans Hypothetical p...    29   0.85 
AC024857-2|AAK31567.2|  463|Caenorhabditis elegans Hypothetical ...    27   3.4  
Z82083-8|CAB04968.2|  374|Caenorhabditis elegans Hypothetical pr...    27   4.5  
AL021480-6|CAD90181.1|  374|Caenorhabditis elegans Hypothetical ...    27   4.5  
Z81038-8|CAB02763.1|  328|Caenorhabditis elegans Hypothetical pr...    26   7.9  
U80448-10|AAB37823.1|  482|Caenorhabditis elegans Hypothetical p...    26   7.9  

>Z68227-10|CAA92515.1|   95|Caenorhabditis elegans Hypothetical
           protein F49C12.12 protein.
          Length = 95

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 202 WNVIILNVVTVFFQIEGAGLFSELNCAGY 116
           W VI L ++ VFF I+   LF +L+  G+
Sbjct: 22  WGVIFLGLLGVFFYIQAVTLFPDLHFEGH 50


>AC024857-2|AAK31567.2|  463|Caenorhabditis elegans Hypothetical
           protein Y71G12A.4 protein.
          Length = 463

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
 Frame = -1

Query: 277 CLHNCHRIGTVVKMSSIWSD---RTHYEWNV---IILNVVTVFF 164
           CL+  HR+      S +WSD   ++   W +   I+L +V++FF
Sbjct: 56  CLNVAHRVACPAHDSKLWSDVMQKSFSIWKIISRILLIIVSIFF 99


>Z82083-8|CAB04968.2|  374|Caenorhabditis elegans Hypothetical
           protein ZK1010.2 protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 289 LLTWCLHNCHRIGTVVKMSSIWSDRTHYEWNVIILNVVTVFFQI 158
           LL   L  C  +  +V  +      +H EW +I+L V+ V F +
Sbjct: 303 LLNKRLDYCEELVKMVDNTIALRHASHLEWMIIVLIVIEVIFDV 346


>AL021480-6|CAD90181.1|  374|Caenorhabditis elegans Hypothetical
           protein ZK1010.2 protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 289 LLTWCLHNCHRIGTVVKMSSIWSDRTHYEWNVIILNVVTVFFQI 158
           LL   L  C  +  +V  +      +H EW +I+L V+ V F +
Sbjct: 303 LLNKRLDYCEELVKMVDNTIALRHASHLEWMIIVLIVIEVIFDV 346


>Z81038-8|CAB02763.1|  328|Caenorhabditis elegans Hypothetical
           protein C25A1.12 protein.
          Length = 328

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 196 HSTHSGFCRTIWSSSSRRFRYDGSYADTTSIETMREWHR 312
           H+ HS        SS  RF  D + A+   +E M +W +
Sbjct: 141 HAVHSFDPLGFGRSSRSRFSDDNAIAELEMVEVMEDWRK 179


>U80448-10|AAB37823.1|  482|Caenorhabditis elegans Hypothetical
           protein F59A3.9 protein.
          Length = 482

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 38  ITNTYQASVEGFVEHLGVTKE----QGYELIARAVQLAKQARTLYLEEYRDYVQNDDIPL 205
           IT +Y A V+ F   +  T +    +G     + +QL K+    Y    + YVQ  +IP+
Sbjct: 104 ITGSYPAGVDIFSSDIDFTVKVPTLEGANPFLKLMQLRKELSCYYTIFSKAYVQKGNIPV 163

Query: 206 I 208
           +
Sbjct: 164 L 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,796,603
Number of Sequences: 27780
Number of extensions: 176641
Number of successful extensions: 392
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)