Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30424
(630 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 160 3e-38
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 157 3e-37
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 138 1e-31
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 134 2e-30
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 103 3e-21
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 84 2e-15
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 83 4e-15
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 83 7e-15
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 81 2e-14
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 81 3e-14
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 80 4e-14
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 79 1e-13
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 78 2e-13
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 78 2e-13
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 77 4e-13
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 73 4e-12
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 73 6e-12
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 69 7e-11
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 66 9e-10
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 60 3e-08
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 60 4e-08
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 51 3e-05
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 45 0.002
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 44 0.004
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 43 0.005
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 43 0.007
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 42 0.009
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 42 0.009
UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio c... 38 0.15
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 37 0.35
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 37 0.35
UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep... 37 0.46
UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1; Arabido... 36 0.61
UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast p... 36 0.80
UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia... 36 1.1
UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125; Bacter... 35 1.9
UniRef50_Q11UJ1 Cluster: Endoglucanase, glycoside hydrolase fami... 33 4.3
UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;... 33 4.3
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 33 4.3
UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A3J1B0 Cluster: CHU large protein; uncharacterized; n=1... 33 5.7
UniRef50_Q6R7Z5 Cluster: Cathepsin B-like cysteine protease; n=8... 33 5.7
UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellul... 33 5.7
UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: W... 33 7.5
UniRef50_UPI0000DAE7B0 Cluster: hypothetical protein Rgryl_01001... 32 9.9
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 160 bits (388), Expect = 3e-38
Identities = 71/89 (79%), Positives = 82/89 (92%)
Frame = +2
Query: 254 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 433
CTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 72 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 131
Query: 434 VVLGRPGFNVAHRRRKTGKVGFPHRSQRK 520
VVLGRPGF++A ++R+TG +G HR ++
Sbjct: 132 VVLGRPGFSIADKKRRTGCIGAKHRISKE 160
Score = 122 bits (293), Expect = 9e-27
Identities = 60/79 (75%), Positives = 64/79 (81%)
Frame = +3
Query: 54 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 233
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 64
Query: 234 NEKIAVHVQSEELKQKKSL 290
NEKIAVH K ++ L
Sbjct: 65 NEKIAVHCTVRGAKAEEIL 83
Score = 40.3 bits (90), Expect = 0.037
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1
Query: 493 GISPPLTKEDAMKWFQQKYDGIIL 564
G ++KE+AM+WFQQKYDGIIL
Sbjct: 152 GAKHRISKEEAMRWFQQKYDGIIL 175
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 157 bits (380), Expect = 3e-37
Identities = 70/89 (78%), Positives = 81/89 (91%)
Frame = +2
Query: 254 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 433
CTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 126 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 185
Query: 434 VVLGRPGFNVAHRRRKTGKVGFPHRSQRK 520
VVLGR GF++A ++R+TG +G HR ++
Sbjct: 186 VVLGRSGFSIADKKRRTGCIGAKHRISKE 214
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +3
Query: 171 TGQQPVFSKARYTVRSFGIRRNEKIAVHVQSEELKQKKSL 290
+GQ PV SKARYTVRSFGIRRNEKIAVH K ++ L
Sbjct: 98 SGQAPVESKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIL 137
Score = 38.3 bits (85), Expect = 0.15
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 493 GISPPLTKEDAMKWFQQKYDGIILNSQAK*NISK*K**NSKKKKKK 630
G ++KE+AM+WFQQKY GIIL + I K + KK+K++
Sbjct: 206 GAKHRISKEEAMRWFQQKYAGIILPGKIN-LIQKANIFSEKKRKRR 250
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 138 bits (333), Expect = 1e-31
Identities = 63/88 (71%), Positives = 73/88 (82%)
Frame = +2
Query: 257 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYV 436
TVRG KAEEILERGLKV+EY+LR NFSATGNFGFGI EHIDLGIKYDPSIGI+G+DFYV
Sbjct: 70 TVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYV 129
Query: 437 VLGRPGFNVAHRRRKTGKVGFPHRSQRK 520
V+ RPG V R+R G VG H++ ++
Sbjct: 130 VMNRPGARVTRRKRCKGTVGNSHKTTKE 157
Score = 105 bits (253), Expect = 7e-22
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = +3
Query: 63 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 242
++N MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+FGIRRNEK
Sbjct: 5 AQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEK 64
Query: 243 IAVHVQSEELKQKKSL-RGV 299
IAVHV K ++ L RG+
Sbjct: 65 IAVHVTVRGPKAEEILERGL 84
Score = 32.7 bits (71), Expect = 7.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 493 GISPPLTKEDAMKWFQQKYDGIILN 567
G S TKED + WF+QKYD +L+
Sbjct: 149 GNSHKTTKEDTVSWFKQKYDADVLD 173
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 134 bits (324), Expect = 2e-30
Identities = 64/90 (71%), Positives = 70/90 (77%)
Frame = +2
Query: 239 KDCCPCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 418
K C TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIY
Sbjct: 66 KIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 125
Query: 419 GLDFYVVLGRPGFNVAHRRRKTGKVGFPHR 508
G+DFYVVL RPG+ VA RRR +VG HR
Sbjct: 126 GMDFYVVLERPGYRVARRRRCKTRVGIQHR 155
Score = 106 bits (255), Expect = 4e-22
Identities = 52/69 (75%), Positives = 59/69 (85%)
Frame = +3
Query: 51 SEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 230
SE N MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIR
Sbjct: 3 SEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIR 62
Query: 231 RNEKIAVHV 257
RNEKIA +V
Sbjct: 63 RNEKIACYV 71
Score = 42.7 bits (96), Expect = 0.007
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +1
Query: 493 GISPPLTKEDAMKWFQQKYDGIILN 567
GI +TK+DAMKWFQ KY+G+ILN
Sbjct: 151 GIQHRVTKDDAMKWFQVKYEGVILN 175
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 103 bits (248), Expect = 3e-21
Identities = 47/66 (71%), Positives = 57/66 (86%)
Frame = +3
Query: 54 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 233
++ +NVMR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVRSFGIRR
Sbjct: 32 QETKENVMRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRSFGIRR 91
Query: 234 NEKIAV 251
NEKI+V
Sbjct: 92 NEKISV 97
Score = 91.9 bits (218), Expect = 1e-17
Identities = 42/89 (47%), Positives = 59/89 (66%)
Frame = +2
Query: 254 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 433
CT+RG +A +IL RGL+V+E EL++ NFS +GNFGFGIQEHIDLG+KYDP GI+
Sbjct: 99 CTIRGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGIFRYGLL 158
Query: 434 VVLGRPGFNVAHRRRKTGKVGFPHRSQRK 520
+ + ++ K K+G +S +K
Sbjct: 159 CCVVKTRIESCSKKIKKFKIGHTIKSDQK 187
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 CPCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 424
C T+RG +A++ LE L + + L R F + GN FGI+EH D G+KYDP+IG++G+
Sbjct: 63 CKVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGM 122
Query: 425 DFYVVLGRPGFNVAHRRRKTGKVGFPHR 508
D VV+ RPG + RR T K+ HR
Sbjct: 123 DVTVVIKRPGERICKRRIATRKIPTNHR 150
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +3
Query: 69 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 248
NVMR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 249 VHV 257
V
Sbjct: 63 CKV 65
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 83.4 bits (197), Expect = 4e-15
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 CPCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 424
C T+RG +A+E L ++ E L R F + GN FGI+EH D G++YDP+IG++G+
Sbjct: 63 CKVTLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGM 122
Query: 425 DFYVVLGRPGFNVAHRRRKTGKVGFPHR 508
D VVL RPG + RR T K+ HR
Sbjct: 123 DVTVVLKRPGERICKRRIATRKIPTDHR 150
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +3
Query: 69 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 248
N MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NPMRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 249 VHV 257
V
Sbjct: 63 CKV 65
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 82.6 bits (195), Expect = 7e-15
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFY 433
T+RG +A E L++ L+ ++++ +F GN GFGI+EHI + G +YDP +GI+G+D
Sbjct: 94 TLRGQRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVI 153
Query: 434 VVLGRPGFNVAHRRRKTGKVGFPHR 508
+ + RPG+ VA RRR K+ HR
Sbjct: 154 LTIERPGYRVARRRRARSKIPRRHR 178
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/56 (57%), Positives = 43/56 (76%)
Frame = +3
Query: 90 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHV 257
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R FGIRR E IAV V
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIRQFGIRRGENIAVMV 93
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 81.0 bits (191), Expect = 2e-14
Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFY 433
T+RG KA + L+ L V+E L R + G F FGI EHIDL G+ YDP +GI+G+D
Sbjct: 77 TLRGEKALKFLKDALTVKENRLSRKSIGE-GYFAFGIAEHIDLPGVDYDPDVGIFGMDVC 135
Query: 434 VVLGRPGFNVAHRRRKTGKVGFPHR 508
V L R G+ VA RRRK K+ HR
Sbjct: 136 VSLKRRGYRVARRRRKKAKIATSHR 160
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/77 (38%), Positives = 49/77 (63%)
Frame = +3
Query: 63 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 242
++N MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+++FGIR+ E
Sbjct: 12 NENPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEA 71
Query: 243 IAVHVQSEELKQKKSLR 293
I + V K K L+
Sbjct: 72 IGIKVTLRGEKALKFLK 88
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 248 CPCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 424
C T+RG KA++ +E L+ ++ F A GN FGI+EHID+ G+KY+P IGI+G+
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGM 121
Query: 425 DFYVVLGRPGFNVAHRRRKTGKVGFPHRSQRKML*SGSNRNMMVSYL 565
+ V +PG+ +A RR + KV HR ++ N V+Y+
Sbjct: 122 NVSVTFEKPGYRIAKRRIQQKKVPAKHRISKEETMKYMEDNFNVNYV 168
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +3
Query: 69 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 248
N M + I K ++I VGE+G++L+RA +LEQ+ Q PV + ++ T FGIR+ + IA
Sbjct: 2 NPMNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSKVTNPEFGIRKRQPIA 61
Query: 249 VHVQSEELKQKKSLRGV*KSENMN 320
+ K K++ V + N N
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKN 85
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 80.2 bits (189), Expect = 4e-14
Identities = 43/89 (48%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Frame = +2
Query: 248 CPCTVRGA-KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGI-KYDPSIGIYG 421
C T+R A K + L+ VRE L NF +GN FGI ++ D KYDP IGIYG
Sbjct: 59 CKVTIRDADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDPDIGIYG 118
Query: 422 LDFYVVLGRPGFNVAHRRRKTGKVGFPHR 508
+D VVL RPG V+ RRR+ KVG HR
Sbjct: 119 MDVNVVLERPGHRVSRRRRRGVKVGVEHR 147
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +3
Query: 90 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHVQSEE 269
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R G R I V +
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNRDLGTRLGAPIGCKVTIRD 65
Query: 270 LKQKKS 287
+ +S
Sbjct: 66 ADKVQS 71
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/64 (56%), Positives = 51/64 (79%)
Frame = +3
Query: 66 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 245
++ MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R+FG+R+ E I
Sbjct: 24 RSPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENI 83
Query: 246 AVHV 257
AV V
Sbjct: 84 AVMV 87
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFY 433
T+RG KA L+R L + ++ + GN FGI+EHI + G+KYDP +GI G+D
Sbjct: 88 TLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILGMDVA 147
Query: 434 VVLGRPGFNVAHRRR-KTGKVGFPHRSQRK 520
+ + RPG + RRR + G + HR R+
Sbjct: 148 ITIQRPGHRIVERRRQRRGHIPRRHRVTRE 177
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +2
Query: 257 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFY 433
T+R +A L R L ++ LR ++F+A GN FGI+EHI + G +YDP++GI+G D
Sbjct: 93 TLRRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDVA 151
Query: 434 VVLGRPGFNVAHRRRKTGKVGFPHRSQRK 520
V L RPGF V +RRR VG HR R+
Sbjct: 152 VTLARPGFRVQYRRRARADVGKDHRVSRE 180
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/61 (42%), Positives = 42/61 (68%)
Frame = +3
Query: 75 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 254
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++ FGIRR E I +
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLL 91
Query: 255 V 257
V
Sbjct: 92 V 92
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 TVRGAKAEEIL-ERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 430
T+RG KA +IL E+ L +++++ +F+ G FGFGI E+I + G+KYDP +G+ GL+
Sbjct: 66 TLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLEA 124
Query: 431 YVVLGRPGFNVAHRRRKTGKVGFPHRSQRK 520
YV L RPG+ V RR K KVG HR ++
Sbjct: 125 YVTLERPGYRVERRRIKRSKVGSRHRLNKE 154
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = +3
Query: 75 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 254
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V + IR I V
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVK 64
Query: 255 VQSEELKQKKSLR 293
V K K L+
Sbjct: 65 VTLRGEKAYKILK 77
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFY 433
T+RG A + R + + +++ +F GNF FGI EHID+ GIKYDP IGI GLD
Sbjct: 66 TIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDVC 125
Query: 434 VVLGRPGFNVAHRRRKTGKVGFPHR 508
+ L RPG+ + R + +VG HR
Sbjct: 126 MTLSRPGYGIRKRSKHKARVGRSHR 150
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = +3
Query: 75 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI--A 248
MR + + K+ LN+ VG+SG+ + A + L +++G++P A T R FG+R+ E I A
Sbjct: 5 MRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRKGEPIGAA 64
Query: 249 VHVQSEE 269
V ++ E+
Sbjct: 65 VTIRGED 71
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 73.3 bits (172), Expect = 4e-12
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFY 433
T+RG A+ +L+R L+ + + F GN+ FGI+EHID+ G+KY+PSIGI GL
Sbjct: 70 TIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGILGLGIS 129
Query: 434 VVLGRPGFNVAHRRRKTGKVGFPH 505
V L RPG+ + R + VG H
Sbjct: 130 VTLTRPGYGIRTRSKHKASVGKSH 153
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/65 (36%), Positives = 44/65 (67%)
Frame = +3
Query: 63 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 242
+++ M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R +G+R+ E
Sbjct: 5 TESPMKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEP 64
Query: 243 IAVHV 257
I V V
Sbjct: 65 IGVAV 69
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 72.9 bits (171), Expect = 6e-12
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFY 433
T+R AEE L+ L + E L F TGNF FG++EH + +YDPSIGIYGLD
Sbjct: 75 TLRDEMAEEFLQTALPLAE--LATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVT 132
Query: 434 VVLGRPGFNVAHRRRKTGKVGFPHR 508
V L RPG+ VA R + + + HR
Sbjct: 133 VNLVRPGYRVAKRDKASRSIPTKHR 157
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +3
Query: 75 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 254
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV F IR + I
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 73
Query: 255 V 257
V
Sbjct: 74 V 74
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 69.3 bits (162), Expect = 7e-11
Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +2
Query: 257 TVRGAKAEEILERGL---KVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 424
T+RG KAEE L+ K L +F GNF FG+ EHID G KYDPS+GIYG+
Sbjct: 73 TLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVGIYGM 132
Query: 425 DFYVVLGRPGFNVAHRRRKTGKVGFPH 505
D V + G+ V R+ K + H
Sbjct: 133 DICVTFEKSGYRVKSRKVKRSHIPEKH 159
Score = 62.5 bits (145), Expect = 8e-09
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = +3
Query: 66 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 245
K M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T +FGIR+ I
Sbjct: 9 KEPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPI 68
Query: 246 AVHVQSEELKQKKSLR 293
+ V K ++ L+
Sbjct: 69 GLKVTLRGKKAEEFLK 84
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 65.7 bits (153), Expect = 9e-10
Identities = 33/67 (49%), Positives = 45/67 (67%)
Frame = +3
Query: 57 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 236
+ ++N MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR F IR+
Sbjct: 3 ETTENSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKG 62
Query: 237 EKIAVHV 257
I V V
Sbjct: 63 LNIGVKV 69
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +2
Query: 257 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFY 433
T+R A L+ ++Y++ +F GN FGI ++ D G+KYDP IGI+G+D
Sbjct: 70 TLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGIFGMDIA 129
Query: 434 VVL-GRPGFNVAHRRRK 481
+V R G+ + RR K
Sbjct: 130 IVFRRRGGYRIEKRRIK 146
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 60.5 bits (140), Expect = 3e-08
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = +2
Query: 248 CPCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 427
C C++ K L + LK++ + + NFS T FG GI +H++LG +D IGI+G++
Sbjct: 59 CFCSLSKKKGILFLYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNFDQKIGIHGIN 118
Query: 428 FYVVLGRPGFNVAHRRRKTGK 490
L R G+ + ++ + K
Sbjct: 119 IIGDLSRRGYRIKLKKEQDPK 139
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 60.1 bits (139), Expect = 4e-08
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = -3
Query: 454 TWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFF 278
TW +V++ ++N++ +VLDTQ++VFL+TE ++T EV Q +F D QT +DFF
Sbjct: 44 TWSTHDNVEIHTVNTDTWVVLDTQIDVFLDTETEVTGSREVSVSQLVFLDLQTSFQDFF 102
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = -2
Query: 305 LSNPSQGFXXXXXXXLYMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTG 126
L Q F +DSNLF+++DT+ + SLG L+ +L Q+LG + Q VT
Sbjct: 94 LQTSFQDFFSLWTTNSNVDSNLFVSSDTESSDSVSSLGLNWSLTRQLFQNLGSSGQSVTR 153
Query: 125 FTNTDVQAKLSDMKIPHYI 69
FTN ++Q + D++ H +
Sbjct: 154 FTNRNIQDQFLDLQFTHRV 172
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/63 (34%), Positives = 39/63 (61%)
Frame = -2
Query: 245 NLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHYIF 66
+LF+T + +R H + LG+ RLL+ +LLQHL + +T N +V+ +L + PH +
Sbjct: 144 DLFVTANAERAHGVARLGEDRLLTGQLLQHLRRLREAITALANANVEHELVNADRPHRVL 203
Query: 65 RII 57
R++
Sbjct: 204 RLV 206
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = -3
Query: 481 LTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 302
LTP+V V ++DV++ +++ +VLD +VNVF +TE ++TRG EV +F F
Sbjct: 65 LTPAVDSVAR-ALQHDVEIHTVDPCGRVVLDAEVNVFADTETEVTRGAEVALEEFEFLHL 123
Query: 301 QTPLKD 284
+ L++
Sbjct: 124 EPALQN 129
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Frame = +3
Query: 66 KNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 236
K+VM+ I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++ SF IR+
Sbjct: 23 KSVMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIASFKIRQG 82
Query: 237 EKIAVHV 257
++I V
Sbjct: 83 QEIGCKV 89
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Frame = +3
Query: 54 EDNSKNVMRNLHIRKLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTVRSFG 224
E N KN+ + + K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++ +F
Sbjct: 23 EFNYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSISNFK 82
Query: 225 IRRNEKIAVHV 257
IR+ I + V
Sbjct: 83 IRKGMPIGLKV 93
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 43.2 bits (97), Expect = 0.005
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +3
Query: 69 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 239
NVM + K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++ F IR
Sbjct: 24 NVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREGW 83
Query: 240 KIAVHV 257
I V V
Sbjct: 84 PIGVKV 89
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 42.7 bits (96), Expect = 0.007
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +3
Query: 66 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 245
KN+M I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++ SF +R++ I
Sbjct: 21 KNIMEIPSIKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSISSFNLRKDMYI 79
Query: 246 AVHV 257
A V
Sbjct: 80 ACKV 83
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 42.3 bits (95), Expect = 0.009
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 66 KNVMRNLHIRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 239
KNVM+ + K+ ++ +G +R T A K + +TGQ+PV +KAR V +F +R
Sbjct: 23 KNVMQIPKLEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNVSNFKLRVGM 82
Query: 240 KIAVHV 257
+ V V
Sbjct: 83 PVGVMV 88
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 42.3 bits (95), Expect = 0.009
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = -3
Query: 481 LTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 302
L P++ E K V+V +I+++ +VLD ++NVF + E +++ GGE QF D
Sbjct: 63 LCPALIDAEPGARKDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLDA 122
Query: 301 QTPLKD 284
+ L D
Sbjct: 123 EAALDD 128
>UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio
cholerae NCTC 8457|Rep: 50S ribosomal protein L5 -
Vibrio cholerae NCTC 8457
Length = 112
Score = 38.3 bits (85), Expect = 0.15
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +3
Query: 69 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 239
+VM+ I K+ LN+ VGE+ D+ L AA + ++GQ+P+ +KAR +V F IR
Sbjct: 24 SVMQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGY 83
Query: 240 KIAVHV 257
I V
Sbjct: 84 PIGCKV 89
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 37.1 bits (82), Expect = 0.35
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2
Query: 239 KDCCPCTVRGAKAEEILERGLKVREYEL 322
K C TV+G KA +LE GLKV+EYEL
Sbjct: 117 KIACYVTVKGEKAMRLLESGLKVKEYEL 144
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 37.1 bits (82), Expect = 0.35
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Frame = +2
Query: 257 TVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGI 415
T+RG K E L+R + +++++ L F GN+ FGI+EHI + +D I
Sbjct: 91 TLRGNKMYEFLDRLVNIALPRIKDFRGLSPKGFDKFGNYTFGIKEHIIFPEVNFDRIDKI 150
Query: 416 YGLDFYVVLGRPGFNVAHRRRKTGKVGFP 502
GLD VV+ N H K+ FP
Sbjct: 151 RGLDIVVVIS--ALNKDHSFALLEKLNFP 177
>UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep:
F13M7.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 665
Score = 36.7 bits (81), Expect = 0.46
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +2
Query: 281 EILERGLKVREYELRR--DNFSATGNFGFGIQEH---IDLGIKYDPSIGIYGLDFYVVLG 445
E+LE+GLK EY + S +G G GI+ H +D GIK D +IG +D Y G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
>UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 36.3 bits (80), Expect = 0.61
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 508 LTKEDAMKWFQQKYDGII 561
+TK+DAMKWFQ KY+G+I
Sbjct: 31 VTKDDAMKWFQVKYEGVI 48
>UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast
precursor; n=43; cellular organisms|Rep: 50S ribosomal
protein L5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 262
Score = 35.9 bits (79), Expect = 0.80
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +3
Query: 69 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 239
N+ + ++K+ +N +G++ L A K + +TGQ+P+ ++AR ++ +F IR ++
Sbjct: 79 NIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQ 138
Query: 240 KIAVHV 257
+ + V
Sbjct: 139 PLGIAV 144
>UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L5 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 189
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/94 (22%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +3
Query: 21 VEER*KGEEGSEDNSKNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVF 191
++E+ + E + N + I+K+ + +CVG++ + K + +TGQ+P
Sbjct: 13 IKEKERQELQKKFGYSNNHQTPRIKKIVVTMCVGDAVVDSKIIYYVKKCMAMITGQEPGL 72
Query: 192 SKARYTVRSFGIRRNEKIAVHVQSEELKQKKSLR 293
KA+ ++ +F +R+ IA V + + + +R
Sbjct: 73 IKAKKSIAAFKLRKGMPIACKVTLRKKRAEDFIR 106
>UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125;
Bacteria|Rep: 50S ribosomal protein L5 -
Propionibacterium acnes
Length = 210
Score = 34.7 bits (76), Expect = 1.9
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 66 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 236
+N M + K+ +N+ VG++ + A + + +TGQ+P +KAR ++ F +R
Sbjct: 32 RNPMLIPGLEKIVVNMGVGDAAHDSKVMDGAIRDITAITGQKPQVTKARKSIAQFKLREG 91
Query: 237 EKIAVHV 257
+ I HV
Sbjct: 92 QPIGCHV 98
Score = 32.3 bits (70), Expect = 9.9
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Frame = +2
Query: 248 CPCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHI-DLGIKYDPS 406
C T+RG + E +R L ++R++ L + F GN+ FG+ E + L I D
Sbjct: 96 CHVTLRGDRMWEFADRLLTLALPRIRDFRGLNSNQFDGKGNYTFGLSEQVMFLEIDQDKI 155
Query: 407 IGIYGLDFYVV 439
+ I G+D V
Sbjct: 156 VRIRGMDITFV 166
>UniRef50_Q11UJ1 Cluster: Endoglucanase, glycoside hydrolase family
9 protein; n=1; Cytophaga hutchinsonii ATCC 33406|Rep:
Endoglucanase, glycoside hydrolase family 9 protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 854
Score = 33.5 bits (73), Expect = 4.3
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -2
Query: 188 YRLLSCELLQHLGGTSQPVTG-FTNTDVQAKLSDMKIPHYIFRI 60
+ + + ++ L G PVTG ++ TD+Q LSD+K Y+ R+
Sbjct: 796 FEITAKPIILDLNGREYPVTGDWSTTDIQLNLSDLKAGMYLIRL 839
>UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;
n=1; Prototheca wickerhamii|Rep: Mitochondrial 60S
ribosomal protein L5 - Prototheca wickerhamii
Length = 231
Score = 33.5 bits (73), Expect = 4.3
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +3
Query: 66 KNVMRNLHIRKLCLNIC----VGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 233
KN+M + + K+ N GE + + A LE +TGQ+P ++ A+ ++ +F +R+
Sbjct: 60 KNIMECVSLNKIVCNTSSKHYAGEK-ESILPAFTALEMITGQKPKYTCAKKSISTFKLRQ 118
Query: 234 NE 239
N+
Sbjct: 119 NQ 120
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 33.5 bits (73), Expect = 4.3
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Frame = +2
Query: 257 TVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGI 415
T+RG K +R + +V+++ + R+ F GN+ FG+QE + + YD + I
Sbjct: 89 TLRGEKMYNFFDRLVSMALPRVKDFRGVPRNGFDGRGNYNFGLQEQLIFPEVSYDSVMQI 148
Query: 416 YGLDFYVV 439
+G++ VV
Sbjct: 149 HGMNITVV 156
>UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 353
Score = 33.1 bits (72), Expect = 5.7
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 317 ELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG--IYGLDFYVVLGRPGFNVAHRRRKTGK 490
E ++D + T + F +++ D+ +YD IG ++G+ G PG +AH R +
Sbjct: 236 EFKKDFPNETLRYSFDAKDYRDIFSEYDLMIGYRVHGIGMCASQGTPGIMIAHDPRASTV 295
Query: 491 VGF 499
GF
Sbjct: 296 KGF 298
>UniRef50_A3J1B0 Cluster: CHU large protein; uncharacterized; n=1;
Flavobacteria bacterium BAL38|Rep: CHU large protein;
uncharacterized - Flavobacteria bacterium BAL38
Length = 2203
Score = 33.1 bits (72), Expect = 5.7
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 274 FSSSDCTWTAIFSLRRIPKDRTVYLALENTGCCPVSCSNTLAARVSLSPDSPT 116
F + D + + I ++ D T+ L G C ++ NT +SL+PD PT
Sbjct: 480 FETLDGSGSVIITIANATSDVTITLNEIELGNCDLTLGNTATVTISLTPDVPT 532
>UniRef50_Q6R7Z5 Cluster: Cathepsin B-like cysteine protease; n=8;
Trypanosoma|Rep: Cathepsin B-like cysteine protease -
Trypanosoma brucei
Length = 340
Score = 33.1 bits (72), Expect = 5.7
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Frame = +3
Query: 84 LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA---RYTVRSFGIRRNEKIAVH 254
+H+ + C+ C+ + AA V E PV SKA R + GI + + V
Sbjct: 1 MHLMRACITFCIASTAVVAVNAALVAE----DAPVLSKAFVDRVNRLNRGIWKAKYDGV- 55
Query: 255 VQSEELKQKKSLRGV*KSENMNCGV------TTSPPRVILASVFKNTLTWVS-STIPQL 410
+Q+ L++ K L GV K N N + T R L S F + W + TIPQ+
Sbjct: 56 MQNITLREAKRLNGVIKKNN-NASILPKRRFTEEEARAPLPSSFDSAEAWPNCPTIPQI 113
>UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellular
organisms|Rep: 50S ribosomal protein L5 - Synechocystis
sp. (strain PCC 6803)
Length = 180
Score = 33.1 bits (72), Expect = 5.7
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 66 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 236
KN+ + + K+ +N +GE+ L + L +TGQ+PV ++AR + F IR
Sbjct: 24 KNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITGQKPVVTRARKAIAGFKIREG 83
Query: 237 EKIAVHV 257
+ V V
Sbjct: 84 MPVGVMV 90
>UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: Wbgx
protein - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 377
Score = 32.7 bits (71), Expect = 7.5
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 278 EEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYD 400
+E+ +R +R + + D+F GN G+ + + +D+G KYD
Sbjct: 199 DEMAKRARLIRNHAIVNDSFDKDGNLGY-VYDVVDIGQKYD 238
>UniRef50_UPI0000DAE7B0 Cluster: hypothetical protein
Rgryl_01001234; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01001234 - Rickettsiella
grylli
Length = 752
Score = 32.3 bits (70), Expect = 9.9
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -3
Query: 280 FCFSSSDCTWTAIFSLRRIPKDRTVYLALENTGCCPVSCSNTLAARVSL-SPDSPTQMFK 104
+ ++ +DC A+ R+ LAL+NT PV N+L+ + L +P+ + MF
Sbjct: 438 YFYAFNDCEVNALPLFSRLFPSSNQPLALKNTSESPVDIKNSLSIQTILKNPEKVSSMFT 497
Query: 103 QS 98
QS
Sbjct: 498 QS 499
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,989,876
Number of Sequences: 1657284
Number of extensions: 11898870
Number of successful extensions: 32612
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 31595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32594
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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