Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30421
(581 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O75940 Cluster: Survival of motor neuron-related-splici... 52 8e-06
UniRef50_Q95RI7 Cluster: LD28068p; n=6; Endopterygota|Rep: LD280... 50 5e-05
UniRef50_UPI00015B5F31 Cluster: PREDICTED: similar to survival o... 44 0.002
UniRef50_A7QCD2 Cluster: Chromosome undetermined scaffold_77, wh... 43 0.005
UniRef50_Q5TN18 Cluster: ENSANGP00000025536; n=1; Anopheles gamb... 42 0.014
UniRef50_A7S946 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.032
UniRef50_UPI000069F679 Cluster: Survival motor neuron protein (C... 40 0.043
UniRef50_Q95Y51 Cluster: Smn (Survival of motor neuron protein) ... 40 0.057
UniRef50_UPI0000DB6DA1 Cluster: PREDICTED: similar to CG13472-PA... 38 0.13
UniRef50_UPI0000E4713B Cluster: PREDICTED: similar to RAD26L hyp... 38 0.23
UniRef50_UPI0000ECB61A Cluster: Tudor domain-containing protein ... 37 0.40
UniRef50_UPI0000ECB5FB Cluster: Tudor domain-containing protein ... 37 0.40
UniRef50_A7SJJ0 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.92
UniRef50_Q16637-2 Cluster: Isoform SMN; n=6; Amniota|Rep: Isofor... 33 4.9
UniRef50_A0DSX0 Cluster: Chromosome undetermined scaffold_62, wh... 33 4.9
UniRef50_Q16637 Cluster: Survival motor neuron protein; n=44; Eu... 33 4.9
UniRef50_O18870 Cluster: Survival motor neuron protein; n=6; Bos... 33 4.9
UniRef50_Q6P518 Cluster: TDRD1 protein; n=1; Homo sapiens|Rep: T... 32 8.6
UniRef50_Q1E7T3 Cluster: Putative uncharacterized protein; n=4; ... 32 8.6
UniRef50_Q9BXT4 Cluster: Tudor domain-containing protein 1; n=14... 32 8.6
>UniRef50_O75940 Cluster: Survival of motor neuron-related-splicing
factor 30; n=23; Deuterostomia|Rep: Survival of motor
neuron-related-splicing factor 30 - Homo sapiens (Human)
Length = 238
Score = 52.4 bits (120), Expect = 8e-06
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 292 LAAEERDPATRHYSKWIIGEKCLAKWRADGMFXEALIXEVLED--XLXVKFDGYTTLEVV 465
LA+ + +T+ W +G+KC+A W DG EA I E+ E+ + F GY EV
Sbjct: 58 LASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVT 117
Query: 466 SLTDIKPLNSGSK 504
L ++KP+ G K
Sbjct: 118 PLLNLKPVEEGRK 130
Score = 35.9 bits (79), Expect = 0.70
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 80 MAEDLRNYTLQLQXVEAXXLTDPHNXXXXXXXXXXXXVIELTQDLIKTQDGDSKVSN 250
+A+ L +Y QLQ VEA + N VIELT+DL+ TQ ++ S+
Sbjct: 5 LAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASS 61
>UniRef50_Q95RI7 Cluster: LD28068p; n=6; Endopterygota|Rep: LD28068p
- Drosophila melanogaster (Fruit fly)
Length = 243
Score = 49.6 bits (113), Expect = 5e-05
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = +2
Query: 80 MAEDLRNYTLQLQXVEAXXLTDPHNXXXXXXXXXXXXVIELTQDLIKTQ 226
MA+DL NY LQLQ VEA TDP N VI LT+DLI+TQ
Sbjct: 1 MADDLHNYKLQLQQVEAALQTDPENEELLKLRSDLDEVITLTRDLIQTQ 49
Score = 39.5 bits (88), Expect = 0.057
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 SSNSDDVTAXLLAAEERDPATRHYSKWIIGEKCLAKWRADGMFXEALIXEVLE-DXLXVK 435
S+ D++ A LL AE+ A + + K G+KC AKW+ D + +A I ++ + V
Sbjct: 69 SNYFDEIEAALLEAEKLVSAAKIWKK---GDKCQAKWKEDRQYYDATIEDISSTGEVNVI 125
Query: 436 FDGYTTLEVVSLTDIK 483
FD Y + +++
Sbjct: 126 FDAYQNRSTTHVNELR 141
>UniRef50_UPI00015B5F31 Cluster: PREDICTED: similar to survival of
motor neuron 1, telomeric; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to survival of motor neuron 1,
telomeric - Nasonia vitripennis
Length = 251
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 298 AEERDPATRHYSKWIIGEKCLAKWRADGMFXEALIXEVLED--XLXVKFDGYTTLEVVSL 471
A + A KW+IG C A + DG EA+I E+ E+ VKF GY E V L
Sbjct: 66 ARQAQKAQTTQKKWVIGSPCRAVYSEDGELYEAVIKEIFENTGKCVVKFIGYNNTETVEL 125
Query: 472 TDI 480
+ +
Sbjct: 126 SSL 128
>UniRef50_A7QCD2 Cluster: Chromosome undetermined scaffold_77, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_77, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 301
Score = 43.2 bits (97), Expect = 0.005
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 325 HYSKWIIGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPL 489
HY K+ IG K A W DG + EA I + D V +DG+ E V +++P+
Sbjct: 99 HYGKFPIGTKVQAVWSEDGEWYEATIDSLTPDGYYVSYDGWGNKEEVDPGNVRPI 153
>UniRef50_Q5TN18 Cluster: ENSANGP00000025536; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000025536 - Anopheles gambiae
str. PEST
Length = 207
Score = 41.5 bits (93), Expect = 0.014
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +1
Query: 328 YSKWIIGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPL 489
Y+ W IG++CLAK+ DG F A I + ++ V F Y E V TD P+
Sbjct: 154 YTNWKIGDRCLAKYWEDGGFYTAEITDTSKNTFVVHFLEYGNYEEVLKTDCIPI 207
>UniRef50_A7S946 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 231
Score = 40.3 bits (90), Expect = 0.032
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +1
Query: 274 DVTAXLLAAEERDP-ATRHYSKWIIGEKCLAKWRADGMFXEALIXEVLED--XLXVKFDG 444
++T LL + P A +KW +G +C A W DG + A I + +D V FD
Sbjct: 46 NLTLDLLKVNVKVPEAELPNAKWKVGHRCQAVWTQDGNYYPATIDLISDDLSTCTVTFD- 104
Query: 445 YTTLEVV---SLTDIKPLNSGSKR 507
Y E+V SL DI ++G KR
Sbjct: 105 YGNTEIVKLDSLKDISAASAGDKR 128
>UniRef50_UPI000069F679 Cluster: Survival motor neuron protein
(Component of gems 1) (Gemin-1).; n=1; Xenopus
tropicalis|Rep: Survival motor neuron protein (Component
of gems 1) (Gemin-1). - Xenopus tropicalis
Length = 222
Score = 39.9 bits (89), Expect = 0.043
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 289 LLAAEERDPATRHYSKWIIGEKCLAKWRADGMFXEALIXEVLE--DXLXVKFDGYTTLEV 462
L + R T + +W +G++C +W DG A+I V E V ++GY E
Sbjct: 55 LRSGTRRRGTTTPFLQWKVGDRCSVQWSEDGQIYSAIIRSVDEVLGTCVVVYEGYKNEEE 114
Query: 463 VSLTDIKP 486
+L D+ P
Sbjct: 115 QNLADLMP 122
>UniRef50_Q95Y51 Cluster: Smn (Survival of motor neuron protein)
related protein 1, isoform a; n=3; Caenorhabditis|Rep:
Smn (Survival of motor neuron protein) related protein
1, isoform a - Caenorhabditis elegans
Length = 239
Score = 39.5 bits (88), Expect = 0.057
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +2
Query: 80 MAEDLRNYTLQLQXVEAXXLTDPHNXXXXXXXXXXXXVIELTQDLIKTQDGDS 238
M E+L +Y LQLQ VEA L DP N +I L +DL +T +S
Sbjct: 1 MEEELASYKLQLQQVEAALLGDPTNVELLKLKEDLGEIISLQEDLAETDKAES 53
>UniRef50_UPI0000DB6DA1 Cluster: PREDICTED: similar to CG13472-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG13472-PA - Apis mellifera
Length = 601
Score = 38.3 bits (85), Expect = 0.13
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 337 WIIGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPLNSGSK 504
W +G+KCLAK+ D + A + V + V+F G+ E V D P+ ++
Sbjct: 460 WRVGDKCLAKYWEDNRYYNAKVTGVSDRTCVVQFKGFENYEEVLQVDCLPITDDNQ 515
>UniRef50_UPI0000E4713B Cluster: PREDICTED: similar to RAD26L
hypothetical protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RAD26L
hypothetical protein, partial - Strongylocentrotus
purpuratus
Length = 827
Score = 37.5 bits (83), Expect = 0.23
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 259 SSNSDDVTAXLLAAEERDPATRHYSKWIIGEKCLAKWRADGMFXEALIXEVLED 420
S + +D AA + + A H KW IG+KC+A + DG +A+I ++ ED
Sbjct: 225 SGDGEDGQELGSAARKTEEAEDH-RKWSIGDKCMAPFSGDGSLYKAVIRKIEED 277
>UniRef50_UPI0000ECB61A Cluster: Tudor domain-containing protein 1.;
n=1; Gallus gallus|Rep: Tudor domain-containing protein
1. - Gallus gallus
Length = 932
Score = 36.7 bits (81), Expect = 0.40
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPL 489
+GE C A++ DG + A++ +V + + V + Y +E V L+++ P+
Sbjct: 747 LGEACCARFSGDGRWYRAVVLKVSQSTVEVLYADYGNIETVPLSNVLPI 795
>UniRef50_UPI0000ECB5FB Cluster: Tudor domain-containing protein 1.;
n=2; Gallus gallus|Rep: Tudor domain-containing protein
1. - Gallus gallus
Length = 1046
Score = 36.7 bits (81), Expect = 0.40
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPL 489
+GE C A++ DG + A++ +V + + V + Y +E V L+++ P+
Sbjct: 861 LGEACCARFSGDGRWYRAVVLKVSQSTVEVLYADYGNIETVPLSNVLPI 909
>UniRef50_A7SJJ0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 4037
Score = 35.5 bits (78), Expect = 0.92
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPL 489
+G C A++ DG + A++ + ED V+F Y +EVV IK L
Sbjct: 1528 VGSLCCAQYSEDGGWYRAIVETIQEDTTTVRFIDYGNVEVVQRNIIKVL 1576
Score = 33.5 bits (73), Expect = 3.7
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 346 GEKCLAKWRADGMFXEALIXEVLED---XLXVKFDGYTTLEVVSLTDIKPL 489
G C AK+ DG + ALI + L D + VKF Y ++ LTD++ L
Sbjct: 278 GYPCCAKFTEDGCWYRALITKDLRDASGFIEVKFMDYGNIQRTPLTDVREL 328
>UniRef50_Q16637-2 Cluster: Isoform SMN; n=6; Amniota|Rep: Isoform
SMN - Homo sapiens (Human)
Length = 262
Score = 33.1 bits (72), Expect = 4.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>UniRef50_A0DSX0 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_62,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 864
Score = 33.1 bits (72), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 346 GEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPL 489
G C+AK+ DG + A I L++ V F Y +++VS DI+ L
Sbjct: 696 GLLCVAKFSVDGNWYRAKITRELKNRYEVLFVDYGNVDIVSQNDIRKL 743
>UniRef50_Q16637 Cluster: Survival motor neuron protein; n=44;
Euteleostomi|Rep: Survival motor neuron protein - Homo
sapiens (Human)
Length = 294
Score = 33.1 bits (72), Expect = 4.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>UniRef50_O18870 Cluster: Survival motor neuron protein; n=6; Bos
taurus|Rep: Survival motor neuron protein - Bos taurus
(Bovine)
Length = 287
Score = 33.1 bits (72), Expect = 4.9
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 304 ERDPATRHYSKWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTD 477
+R T +W +G+ C A W DG A I + + V + GY E +L+D
Sbjct: 76 QRKNTTSPSKQWKVGDNCCAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSD 135
Query: 478 I 480
+
Sbjct: 136 L 136
>UniRef50_Q6P518 Cluster: TDRD1 protein; n=1; Homo sapiens|Rep: TDRD1
protein - Homo sapiens (Human)
Length = 1045
Score = 32.3 bits (70), Expect = 8.6
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPLNS 495
IG+ C AK+ +D + A++ + + V + Y +E + L ++P+ S
Sbjct: 858 IGDACCAKYTSDDFWYRAVVLGTSDTDVEVLYADYGNIETLPLCRVQPITS 908
>UniRef50_Q1E7T3 Cluster: Putative uncharacterized protein; n=4;
Pezizomycotina|Rep: Putative uncharacterized protein -
Coccidioides immitis
Length = 389
Score = 32.3 bits (70), Expect = 8.6
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Frame = +1
Query: 298 AEERDPATRHYSKWI---IGEKCLAKWRA-DGMFXEALIXEVL----EDXLXVKFDGYTT 453
A E PA S + + + LA+W + D F A I + V F Y+T
Sbjct: 191 AAETPPAEESQSSMVSFSVNDNVLARWASGDNAFYPARITSITGSSTNPIYIVSFKSYST 250
Query: 454 LEVVSLTDIKPLNSGSKR 507
E ++ DIKP+++ R
Sbjct: 251 TETLTAKDIKPISNNDTR 268
>UniRef50_Q9BXT4 Cluster: Tudor domain-containing protein 1; n=14;
Mammalia|Rep: Tudor domain-containing protein 1 - Homo
sapiens (Human)
Length = 777
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLED-XLXVKFDGYTTLEVVSLTDIKPLNS 495
IG+ C A + DG + AL+ E+L + + V F Y +E V+ +++ ++S
Sbjct: 362 IGQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADELRMISS 413
Score = 32.3 bits (70), Expect = 8.6
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPLNS 495
IG+ C AK+ +D + A++ + + V + Y +E + L ++P+ S
Sbjct: 590 IGDACCAKYTSDDFWYRAVVLGTSDTDVEVLYADYGNIETLPLCRVQPITS 640
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,405,205
Number of Sequences: 1657284
Number of extensions: 6035994
Number of successful extensions: 10248
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10248
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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