Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30421
(581 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011234-1|AAH11234.1| 238|Homo sapiens survival motor neuron d... 52 1e-06
AL360182-9|CAI15482.1| 238|Homo sapiens survival motor neuron d... 52 1e-06
AF107463-1|AAC84148.1| 238|Homo sapiens splicing factor protein. 52 1e-06
AF083385-1|AAC64086.1| 238|Homo sapiens 30kDa splicing factor p... 52 1e-06
U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron pro... 33 0.73
U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron pro... 33 0.73
U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known i... 33 0.73
U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy d... 33 0.73
BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuro... 33 0.73
BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuro... 33 0.73
BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuro... 33 0.73
BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein. 33 0.73
AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuro... 33 0.73
AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1... 33 0.73
BC063133-1|AAH63133.1| 1045|Homo sapiens TDRD1 protein protein. 32 1.3
BC035010-1|AAH35010.1| 1179|Homo sapiens TDRD1 protein protein. 32 1.3
AK024735-1|BAB14982.1| 713|Homo sapiens protein ( Homo sapiens ... 32 1.3
AF285606-1|AAK31985.1| 777|Homo sapiens tudor domain containing... 32 1.3
EF185284-1|ABM69146.1| 925|Homo sapiens tudor domain containing... 32 1.7
AL591242-6|CAH73905.1| 2096|Homo sapiens protein ( Human DNA seq... 32 1.7
AF039442-1|AAC18034.1| 753|Homo sapiens colon cancer antigen NY... 32 1.7
BX537910-1|CAD97894.1| 651|Homo sapiens hypothetical protein pr... 31 3.0
BC060876-1|AAH60876.1| 650|Homo sapiens tudor domain containing... 31 3.0
BC030514-1|AAH30514.1| 651|Homo sapiens tudor domain containing... 31 3.0
AL512666-2|CAH74000.1| 651|Homo sapiens tudor domain containing... 31 3.0
AL354764-2|CAH72281.1| 651|Homo sapiens tudor domain containing... 31 3.0
AK024660-1|BAB14950.1| 651|Homo sapiens protein ( Homo sapiens ... 31 3.0
>BC011234-1|AAH11234.1| 238|Homo sapiens survival motor neuron
domain containing 1 protein.
Length = 238
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 292 LAAEERDPATRHYSKWIIGEKCLAKWRADGMFXEALIXEVLED--XLXVKFDGYTTLEVV 465
LA+ + +T+ W +G+KC+A W DG EA I E+ E+ + F GY EV
Sbjct: 58 LASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVT 117
Query: 466 SLTDIKPLNSGSK 504
L ++KP+ G K
Sbjct: 118 PLLNLKPVEEGRK 130
Score = 35.9 bits (79), Expect = 0.10
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 80 MAEDLRNYTLQLQXVEAXXLTDPHNXXXXXXXXXXXXVIELTQDLIKTQDGDSKVSN 250
+A+ L +Y QLQ VEA + N VIELT+DL+ TQ ++ S+
Sbjct: 5 LAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASS 61
>AL360182-9|CAI15482.1| 238|Homo sapiens survival motor neuron
domain containing 1 protein.
Length = 238
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 292 LAAEERDPATRHYSKWIIGEKCLAKWRADGMFXEALIXEVLED--XLXVKFDGYTTLEVV 465
LA+ + +T+ W +G+KC+A W DG EA I E+ E+ + F GY EV
Sbjct: 58 LASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVT 117
Query: 466 SLTDIKPLNSGSK 504
L ++KP+ G K
Sbjct: 118 PLLNLKPVEEGRK 130
Score = 35.9 bits (79), Expect = 0.10
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 80 MAEDLRNYTLQLQXVEAXXLTDPHNXXXXXXXXXXXXVIELTQDLIKTQDGDSKVSN 250
+A+ L +Y QLQ VEA + N VIELT+DL+ TQ ++ S+
Sbjct: 5 LAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASS 61
>AF107463-1|AAC84148.1| 238|Homo sapiens splicing factor protein.
Length = 238
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 292 LAAEERDPATRHYSKWIIGEKCLAKWRADGMFXEALIXEVLED--XLXVKFDGYTTLEVV 465
LA+ + +T+ W +G+KC+A W DG EA I E+ E+ + F GY EV
Sbjct: 58 LASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVT 117
Query: 466 SLTDIKPLNSGSK 504
L ++KP+ G K
Sbjct: 118 PLLNLKPVEEGRK 130
Score = 35.9 bits (79), Expect = 0.10
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 80 MAEDLRNYTLQLQXVEAXXLTDPHNXXXXXXXXXXXXVIELTQDLIKTQDGDSKVSN 250
+A+ L +Y QLQ VEA + N VIELT+DL+ TQ ++ S+
Sbjct: 5 LAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASS 61
>AF083385-1|AAC64086.1| 238|Homo sapiens 30kDa splicing factor
protein.
Length = 238
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 292 LAAEERDPATRHYSKWIIGEKCLAKWRADGMFXEALIXEVLED--XLXVKFDGYTTLEVV 465
LA+ + +T+ W +G+KC+A W DG EA I E+ E+ + F GY EV
Sbjct: 58 LASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVT 117
Query: 466 SLTDIKPLNSGSK 504
L ++KP+ G K
Sbjct: 118 PLLNLKPVEEGRK 130
Score = 35.9 bits (79), Expect = 0.10
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 80 MAEDLRNYTLQLQXVEAXXLTDPHNXXXXXXXXXXXXVIELTQDLIKTQDGDSKVSN 250
+A+ L +Y QLQ VEA + N VIELT+DL+ TQ ++ S+
Sbjct: 5 LAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASS 61
>U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron
protein SMN protein.
Length = 294
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron
protein.
Length = 294
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known if
this copy of the gene protein.
Length = 293
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 90 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 140
>U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy
determining gene protein.
Length = 294
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuron
2, centromeric protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuron 1
product protein.
Length = 294
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1
protein protein.
Length = 294
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 334 KWIIGEKCLAKWRADGMFXEALIXEV--LEDXLXVKFDGYTTLEVVSLTDI 480
+W +G+KC A W DG A I + + V + GY E +L+D+
Sbjct: 91 QWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDL 141
>BC063133-1|AAH63133.1| 1045|Homo sapiens TDRD1 protein protein.
Length = 1045
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPLNS 495
IG+ C AK+ +D + A++ + + V + Y +E + L ++P+ S
Sbjct: 858 IGDACCAKYTSDDFWYRAVVLGTSDTDVEVLYADYGNIETLPLCRVQPITS 908
>BC035010-1|AAH35010.1| 1179|Homo sapiens TDRD1 protein protein.
Length = 1179
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLED-XLXVKFDGYTTLEVVSLTDIKPLNS 495
IG+ C A + DG + AL+ E+L + + V F Y +E V+ +++ ++S
Sbjct: 765 IGQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADELRMISS 816
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPLNS 495
IG+ C AK+ +D + A++ + + V + Y +E + L ++P+ S
Sbjct: 993 IGDACCAKYTSDDFWYRAVVLGTSDTDVEVLYADYGNIETLPLCRVQPITS 1043
>AK024735-1|BAB14982.1| 713|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21082 fis, clone CAS02992. ).
Length = 713
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLED-XLXVKFDGYTTLEVVSLTDIKPLNS 495
IG+ C A + DG + AL+ E+L + + V F Y +E V+ +++ ++S
Sbjct: 296 IGQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADELRMISS 347
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPLNS 495
IG+ C AK+ +D + A++ + + V + Y +E + L ++P+ S
Sbjct: 524 IGDACCAKYTSDDFWYRAVVLGTSDTDVEVLYADYGNIETLPLCRVQPITS 574
>AF285606-1|AAK31985.1| 777|Homo sapiens tudor domain containing
protein 1 protein.
Length = 777
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLED-XLXVKFDGYTTLEVVSLTDIKPLNS 495
IG+ C A + DG + AL+ E+L + + V F Y +E V+ +++ ++S
Sbjct: 362 IGQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADELRMISS 413
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPLNS 495
IG+ C AK+ +D + A++ + + V + Y +E + L ++P+ S
Sbjct: 590 IGDACCAKYTSDDFWYRAVVLGTSDTDVEVLYADYGNIETLPLCRVQPITS 640
>EF185284-1|ABM69146.1| 925|Homo sapiens tudor domain containing 6
protein.
Length = 925
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXL 426
IG+ C+ ++R DG + ALI + ED L
Sbjct: 478 IGDPCIVRYREDGHYYRALITNICEDYL 505
>AL591242-6|CAH73905.1| 2096|Homo sapiens protein ( Human DNA sequence
from clone RP11-446F17 on chromosome 6 Contains the 5'
end of the CYP39A1 gene for cytochrome P450 subfamily
XXXIX ).
Length = 2096
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXL 426
IG+ C+ ++R DG + ALI + ED L
Sbjct: 1570 IGDPCIVRYREDGHYYRALITNICEDYL 1597
>AF039442-1|AAC18034.1| 753|Homo sapiens colon cancer antigen
NY-CO-45 protein.
Length = 753
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXL 426
IG+ C+ ++R DG + ALI + ED L
Sbjct: 300 IGDPCIVRYREDGHYYRALITNICEDYL 327
>BX537910-1|CAD97894.1| 651|Homo sapiens hypothetical protein
protein.
Length = 651
Score = 31.1 bits (67), Expect = 3.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 328 YSK-WIIGEKCLAKWRADGMFXEALIXEVLEDXLX--VKFDGYTTLEVVSLTDIKPLNS 495
Y+K W G++C A + D F A + + + VKF Y E V L++IKP+ +
Sbjct: 552 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQT 610
>BC060876-1|AAH60876.1| 650|Homo sapiens tudor domain containing 3
protein.
Length = 650
Score = 31.1 bits (67), Expect = 3.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 328 YSK-WIIGEKCLAKWRADGMFXEALIXEVLEDXLX--VKFDGYTTLEVVSLTDIKPLNS 495
Y+K W G++C A + D F A + + + VKF Y E V L++IKP+ +
Sbjct: 551 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQT 609
>BC030514-1|AAH30514.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 31.1 bits (67), Expect = 3.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 328 YSK-WIIGEKCLAKWRADGMFXEALIXEVLEDXLX--VKFDGYTTLEVVSLTDIKPLNS 495
Y+K W G++C A + D F A + + + VKF Y E V L++IKP+ +
Sbjct: 552 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQT 610
>AL512666-2|CAH74000.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 31.1 bits (67), Expect = 3.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 328 YSK-WIIGEKCLAKWRADGMFXEALIXEVLEDXLX--VKFDGYTTLEVVSLTDIKPLNS 495
Y+K W G++C A + D F A + + + VKF Y E V L++IKP+ +
Sbjct: 552 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQT 610
>AL354764-2|CAH72281.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 31.1 bits (67), Expect = 3.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 328 YSK-WIIGEKCLAKWRADGMFXEALIXEVLEDXLX--VKFDGYTTLEVVSLTDIKPLNS 495
Y+K W G++C A + D F A + + + VKF Y E V L++IKP+ +
Sbjct: 552 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQT 610
>AK024660-1|BAB14950.1| 651|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21007 fis, clone CAE03871. ).
Length = 651
Score = 31.1 bits (67), Expect = 3.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 328 YSK-WIIGEKCLAKWRADGMFXEALIXEVLEDXLX--VKFDGYTTLEVVSLTDIKPLNS 495
Y+K W G++C A + D F A + + + VKF Y E V L++IKP+ +
Sbjct: 552 YAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQT 610
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,515,612
Number of Sequences: 237096
Number of extensions: 898695
Number of successful extensions: 1114
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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