Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30421
         (581 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061350-1|AAL28898.1|  243|Drosophila melanogaster LD28068p pro...    50   3e-06
AY094745-1|AAM11098.1|  892|Drosophila melanogaster GM03859p pro...    30   2.0  
AY071649-1|AAL49271.1|  892|Drosophila melanogaster RE70955p pro...    30   2.0  
AE014297-1777|AAF55005.1|  892|Drosophila melanogaster CG9925-PA...    30   2.0  

>AY061350-1|AAL28898.1|  243|Drosophila melanogaster LD28068p
           protein.
          Length = 243

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 26/49 (53%), Positives = 29/49 (59%)
 Frame = +2

Query: 80  MAEDLRNYTLQLQXVEAXXLTDPHNXXXXXXXXXXXXVIELTQDLIKTQ 226
           MA+DL NY LQLQ VEA   TDP N            VI LT+DLI+TQ
Sbjct: 1   MADDLHNYKLQLQQVEAALQTDPENEELLKLRSDLDEVITLTRDLIQTQ 49



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +1

Query: 259 SSNSDDVTAXLLAAEERDPATRHYSKWIIGEKCLAKWRADGMFXEALIXEVLE-DXLXVK 435
           S+  D++ A LL AE+   A + + K   G+KC AKW+ D  + +A I ++     + V 
Sbjct: 69  SNYFDEIEAALLEAEKLVSAAKIWKK---GDKCQAKWKEDRQYYDATIEDISSTGEVNVI 125

Query: 436 FDGYTTLEVVSLTDIK 483
           FD Y       + +++
Sbjct: 126 FDAYQNRSTTHVNELR 141


>AY094745-1|AAM11098.1|  892|Drosophila melanogaster GM03859p
           protein.
          Length = 892

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +1

Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPLN 492
           +GE CLA +  D  +   +  EV ++ + + F  +   E V++  +KP++
Sbjct: 778 VGELCLAIYSEDKNWYRGVCQEVKDNMVKILFCDFGNTEYVAVRHVKPIS 827


>AY071649-1|AAL49271.1|  892|Drosophila melanogaster RE70955p
           protein.
          Length = 892

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +1

Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPLN 492
           +GE CLA +  D  +   +  EV ++ + + F  +   E V++  +KP++
Sbjct: 778 VGELCLAIYSEDKNWYRGVCQEVKDNMVKILFCDFGNTEYVAVRHVKPIS 827


>AE014297-1777|AAF55005.1|  892|Drosophila melanogaster CG9925-PA
           protein.
          Length = 892

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +1

Query: 343 IGEKCLAKWRADGMFXEALIXEVLEDXLXVKFDGYTTLEVVSLTDIKPLN 492
           +GE CLA +  D  +   +  EV ++ + + F  +   E V++  +KP++
Sbjct: 778 VGELCLAIYSEDKNWYRGVCQEVKDNMVKILFCDFGNTEYVAVRHVKPIS 827


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,162,834
Number of Sequences: 53049
Number of extensions: 284416
Number of successful extensions: 598
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)