Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30417
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.9  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   4.5  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   5.9  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   7.8  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -3

Query: 509 WQLS*QPCXSSCLQAYEQHHG--ISIQFHGT 423
           W+L    C + CL+ Y    G  +++Q +GT
Sbjct: 744 WELKHADCFNHCLEVYRPSSGGAVALQSNGT 774


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = +2

Query: 446 YRDVVRKLEDKRXGXAVXRVAMKRNLRGSPRMLVRRCRRRQHHSLPSSNP 595
           Y + V  + DK       R+A  R ++   +   + C+   HH L   +P
Sbjct: 239 YGNTVVAVADKLSDMYWLRIAQDRVMKSVVKEHTKNCQHTWHHRLEHRDP 288


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 71  DDCRQTAQQMTTAIDHYGLIAKA 3
           D+  Q  ++M    DHYGL+  A
Sbjct: 171 DNHAQLVEEMREEFDHYGLLLTA 193


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 481 PLVFKLTNNITVFPSNFMGQSAYMTVITARFQTE 380
           PLV K +NN TV  +       Y+  +T  F  E
Sbjct: 279 PLVVKKSNNHTVLITQARSFGKYVGRLTVNFDCE 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,943
Number of Sequences: 2352
Number of extensions: 13060
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)