Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30416
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 9   YYYFIVKMFNYKSGFKFSGVNVRMLF*NCCYL*II 113
           YY FI+ +  Y   + F    V +LF  C Y  ++
Sbjct: 104 YYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVV 138


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -1

Query: 520 TYIIVHKIFFHRSLVCYASKLGIFSISNLTL 428
           +YI+++  FFH S V Y   + ++ + N+ L
Sbjct: 270 SYIVMYVFFFHLSDVRYV--MVVYLLKNVVL 298


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 497 NLVYNYVCXXLL*TMCYIVILNQC 568
           +LV +Y+   L+  + + VILN C
Sbjct: 77  HLVLDYLDEFLIVALAFQVILNSC 100


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 497 NLVYNYVCXXLL*TMCYIVILNQC 568
           +LV +Y+   L+  + + VILN C
Sbjct: 77  HLVLDYLDEFLIVALAFQVILNSC 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,455
Number of Sequences: 336
Number of extensions: 2694
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)