Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30415
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.76 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.1  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 194 FLIFIVKFSLLF*HYIYRLSFL*CVMKVIFVFVL 295
           F+IF V F L   ++ Y    L CV    + F++
Sbjct: 89  FIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFII 122



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -2

Query: 653 LVCVYLYRTPNIFSSVYYRIRLLYSVKSCAIYLFSITLFFPSSF 522
           L+C+Y +    I  +V+    L      CA  +F++ L F  +F
Sbjct: 143 LLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAF 186



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 181 LILLILDFHC*VFFIILTLHIPF 249
           L+ L+  +H    FII T+H+ F
Sbjct: 160 LLFLLCIYHFFCAFIIFTMHLLF 182


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 263 CVMKVIFVFVLNQ*TDHDIM*IFC 334
           C++K IF  ++   T +D++ IFC
Sbjct: 70  CILKHIFNILMKNVTLNDVVFIFC 93


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 632 RTPNIFSSVYYRIRLLYSVKSC 567
           ++P I   V+  + LLYS+ SC
Sbjct: 292 QSPFIDGPVFVILTLLYSLNSC 313


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 626 PNIFSSVYYRIRLL 585
           PN+ SSVYY  R L
Sbjct: 213 PNVNSSVYYDPRAL 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,599
Number of Sequences: 336
Number of extensions: 3093
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)