Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30413
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   0.91 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   0.91 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   3.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    20   8.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   8.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   8.5  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 0.91
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 275 LFHLFYCFRVTSSTIFFTI 219
           LF+LFYC++     I+  I
Sbjct: 16  LFYLFYCYKTIKQHIYSLI 34


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 0.91
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 275 LFHLFYCFRVTSSTIFFTI 219
           LF+LFYC++     I+  I
Sbjct: 16  LFYLFYCYKTIKQHIYSLI 34


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -3

Query: 156 YLXLSHCLYQNLYDCSHHDSCHHPFDSSCHPFL 58
           Y  +   L Q+ ++C H    H  +D    P+L
Sbjct: 71  YKVVEKILTQSSFECIHLSVLHKCYDYDAIPWL 103


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 102  DSCHHPFDSSCHP 64
            D C  P ++ CHP
Sbjct: 2274 DHCDWPENTECHP 2286


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 311 EHKKETYHNDEYSARDE 361
           +H+K+   ++EY A D+
Sbjct: 22  KHQKQESRDEEYEATDQ 38


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 248 VTSSTIFFTILGLPLI 201
           VT  T+FF +LG  ++
Sbjct: 63  VTIITVFFVVLGAAVV 78


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 248 VTSSTIFFTILGLPLI 201
           VT  T+FF +LG  ++
Sbjct: 63  VTIITVFFVVLGAAVV 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,063
Number of Sequences: 336
Number of extensions: 1053
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)