Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30413
(419 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.39
SB_3509| Best HMM Match : XAP5 (HMM E-Value=7.6) 31 0.51
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 29 1.2
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_44169| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_35651| Best HMM Match : NUMOD3 (HMM E-Value=3.2) 28 3.6
SB_27033| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_11767| Best HMM Match : Kinesin (HMM E-Value=0) 28 3.6
SB_10632| Best HMM Match : DEP (HMM E-Value=0.78) 28 3.6
SB_10578| Best HMM Match : NUMOD3 (HMM E-Value=3.2) 28 3.6
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1) 27 6.3
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 27 8.3
SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 27 8.3
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 27 8.3
SB_13149| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 31.1 bits (67), Expect = 0.39
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 257 NRKGEKXXXKKRKXARDDEHKKETYHNDEYSARDETESRR-TKDKRSRN 400
+R+ K ++ +RDD H+ + H+ S D + RR +KD SR+
Sbjct: 794 DRRDSKGHRDEKSRSRDDTHRSKKEHSRHGSHSDSDKDRRSSKDSHSRS 842
>SB_3509| Best HMM Match : XAP5 (HMM E-Value=7.6)
Length = 250
Score = 30.7 bits (66), Expect = 0.51
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 263 KGEKXXXKKRKXARDDEHKKETYHNDEYSARDETESRRTK 382
KG+K +KR DDE ++ET+H ++S+ + S+R +
Sbjct: 11 KGDKKKEEKRTEMSDDEGEEETFH-VKFSSDSNSRSKRLR 49
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 87 PFDSSCHPFLYLFYLLGLARDLHLVXS 7
P +S C+PFLY F+ R+L ++ S
Sbjct: 544 PINSLCNPFLYAFFTKAFKRELFVLLS 570
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 305 DDEHKKETYHNDEYSARDETESRRTKDKRSRNAGMTTT 418
DD+ K NDE S D++++ + D S N G T+
Sbjct: 283 DDDEKSADTKNDEISDSDKSDTEKDADSDSENDGSGTS 320
>SB_44169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.3 bits (60), Expect = 2.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 138 CLYQNLYDCSHHDSCHHPFDSSC 70
C+Y + DC H D PF + C
Sbjct: 10 CIYNIILDCRHDDKQKEPFRNDC 32
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +2
Query: 257 NRKGEKXXXKKRKXARDDEHKKETYHNDEYSARDETESRRTKDKRSRN 400
N+K +K ++ D+HKK T+ N+E + ++ K+ N
Sbjct: 669 NKKAKKSVSIDKQTISSDKHKKSTHMNNEVKKSVSLKIKKEKNTEQHN 716
>SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 257 NRKGEKXXXKKRKXARDDEHK--KETYHNDEYSARDETESRRTKDKRSRN 400
N KGE+ K +D E + KE H + E + KD++ +N
Sbjct: 764 NTKGEEKDKGKEDKGKDGEERKEKENKHGKVEKGNQDGEGKERKDEKDKN 813
>SB_35651| Best HMM Match : NUMOD3 (HMM E-Value=3.2)
Length = 228
Score = 27.9 bits (59), Expect = 3.6
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +2
Query: 257 NRKGEKXXXKKRKXARDD---EHKKETYHN---DEYSARDETESRRTKDKRSRN 400
++KG K K+ K ++D EHK + HN D +D S +TKDK S++
Sbjct: 123 DQKGSKET-KEHKDSKDKDSKEHKDQKSHNHHKDPRGHKDRHHSDKTKDKPSQS 175
>SB_27033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 263 KGEKXXXKKRKXARDDEHKKETYHNDEYSARDETESRRTKDKRSRN 400
KG+K K D+E+ ET +E S R + + TK R+ N
Sbjct: 712 KGKKGVTKSVAIGTDEENVDETKSQEEKSPRTQPTAVHTKSVRNDN 757
>SB_11767| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1230
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 237 YYLLHYS-WSASYPFPCQLLCRHLFDXSYLXLSHCLYQNLYDCSHHD 100
Y LH++ + A Y + L R+++ Y + LY N+Y HH+
Sbjct: 52 YRALHHNIYRALYHNIYRALYRNIYRALYRNIYRALYSNIYRALHHN 98
>SB_10632| Best HMM Match : DEP (HMM E-Value=0.78)
Length = 500
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -3
Query: 183 LCRHLFDXSYLXLSHCLYQNLYDCSHHDSCHHPFDS 76
L R +F L + Y ++ CSH H P D+
Sbjct: 299 LARQMFQIERLSRADDFYSSVSSCSHQSHAHEPADT 334
>SB_10578| Best HMM Match : NUMOD3 (HMM E-Value=3.2)
Length = 379
Score = 27.9 bits (59), Expect = 3.6
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +2
Query: 257 NRKGEKXXXKKRKXARDD---EHKKETYHN---DEYSARDETESRRTKDKRSRN 400
++KG K K+ K ++D EHK + HN D +D S +TKDK S++
Sbjct: 64 DQKGSKET-KEHKDSKDKDSKEHKDQKSHNHHKDPRGHKDRHHSDKTKDKPSQS 116
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 254 NNRKGEKXXXKKRKXARDDEHKKETYHNDEYSARDETESRRTKD 385
++ + EK KK++ R+ + K+ ++DE RDE E D
Sbjct: 796 DSSESEKGKAKKQRKGREKKGKEIKKNDDEEEERDEEEDDEEDD 839
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 260 RKGEKXXXKKRKXARDDEHKKETYHNDEYSARDETESRRTKDK 388
RKG + K+ K D+E +++ +DE +E +S++ K
Sbjct: 809 RKGREKKGKEIKKNDDEEEERDEEEDDEEDDDEEDDSKKASGK 851
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 213 TKNSEEDSRRRDSETIEKVKKXXXRNERXPGTTNTKRKHITMMNIQL 353
T N+ ED +++ +T E + NE+ K+K + NI L
Sbjct: 467 TTNNTEDQQQQPMDTEENKAENKEENEKKADAPKNKKKKQVVKNIDL 513
>SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1)
Length = 345
Score = 27.1 bits (57), Expect = 6.3
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 254 NNRKGEKXXXKKRKXARDDEHKKETYHNDEYSARDETESRRTKDKRSR 397
NN + E+ +R RDDE KKE D+ + R K K+S+
Sbjct: 299 NNNRIERKALMER-VMRDDEAKKELSAFTPQQLADKVRAERNKAKKSK 345
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 266 GEKXXXKKRKXARD-DEHKKETYHNDEYSARDETESRRTKDKRSRN 400
G+ K +K ++D ++K E N E ++++ E + K++ S+N
Sbjct: 430 GKTDKKKSKKKSKDKSKNKGEKSKNKEEESKNKEEKSKNKEEESKN 475
>SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/49 (22%), Positives = 20/49 (40%)
Frame = +2
Query: 254 NNRKGEKXXXKKRKXARDDEHKKETYHNDEYSARDETESRRTKDKRSRN 400
NN K + + ++ Y N+ +R+ S RT + +RN
Sbjct: 134 NNNKNNRRTDNNNRNNNNNRRTDNNYRNNNNCSRNTNNSSRTTNSSNRN 182
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 287 KRKXARDDEHKKETYHNDEYSARDETESRRTKDKRSR 397
+ K + E K+E+ H+DE ++RD + +R +
Sbjct: 591 REKERQKKEEKEESSHSDEDTSRDRNREKENDREREK 627
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 287 KRKXARDDEHKKETYHNDEYSARDETESRRTK 382
KRK D+E KK + N+ SA T S+ K
Sbjct: 1825 KRKAPADEESKKGSVENNTDSASSNTASQENK 1856
>SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 260 RKGEKXXXKKRKXARDDEHKKETYHNDEYSARDETESRRTKDKRSR 397
++ +K +K+K + + KKE +E +E E RR K +R R
Sbjct: 9 KQKKKKKKRKKKKQKKQKKKKE--EEEEEEEENEEEERRRKRRRRR 52
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 288 NERXPGTTNTKRKHITMMNIQLETRPSPGELR 383
NER P + N R ++T N + +P+P LR
Sbjct: 510 NERQPASQNKTRPNLTSDNPPHKIKPAPTTLR 541
>SB_13149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = -1
Query: 368 TRSRLELNIHHCDMFPFCVRRPGRSFVSXPXLFHLFYCFRVTSSTIFFTILGLPLILFXV 189
TR L++ +C P+ + + P L H+ YC R+T +P L +
Sbjct: 16 TRITYLLHVMYCTRIPYFLHV--MYYTRIPYLLHVMYCTRITYLLHVMYYARIPYFLHVM 73
Query: 188 SY 183
Y
Sbjct: 74 YY 75
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,789,407
Number of Sequences: 59808
Number of extensions: 130779
Number of successful extensions: 630
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 789494848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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