Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30412
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.1  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   3.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.6  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   8.6  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 512 SIHEEHDEQNRRYDAEEDHVHRDHEVPL 429
           ++H++H +QN  ++     V+R H + L
Sbjct: 312 NMHQQHHQQNMSHEELSAMVNRCHPLSL 339


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 300 CSGHGVCNSEGHCHCE 347
           C+  G+C S+  CH +
Sbjct: 104 CAFDGICCSQDSCHAD 119


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 269 DYRLPTDSTDTHLCFKHILCSPQAAPS 189
           D+   + S+DT    +H   SPQ  P+
Sbjct: 62  DFHSSSPSSDTSQDLQHSYQSPQTQPA 88


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 325 PRVTVTVKPDSRRHCVPCPALVAPWTPVRP 414
           P + + V   + + C P   L+  W P+ P
Sbjct: 480 PVMRICVSAWNPKDCDPLITLIETWMPLLP 509


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 426 IQRNFMVAMYVIFLGI 473
           I   FMVA YV+F  +
Sbjct: 26  IHSYFMVAFYVVFSSV 41


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 426 IQRNFMVAMYVIFLGI 473
           I   FMVA YV+F  +
Sbjct: 26  IHSYFMVAFYVVFSSV 41


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 502 RNMTSRTDGMMPRKITYIATMKFL 431
           R +    DG +  ++ Y A MKFL
Sbjct: 231 RGVRYTADGTISPRLIYDALMKFL 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,213
Number of Sequences: 336
Number of extensions: 2618
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)