Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30412
(515 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377... 39 0.003
10_08_1005 - 22179407-22180122,22180210-22180653,22180737-221808... 32 0.24
02_01_0129 - 934865-935152,935241-935490,935965-936105,937175-93... 31 0.42
05_02_0037 + 5883285-5884292 31 0.55
04_04_1076 - 30639835-30640898,30641613-30641915,30642008-306420... 31 0.73
03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396... 31 0.73
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 31 0.73
07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708 30 1.3
02_05_0460 - 29224525-29224620,29225525-29226625 30 1.3
01_06_1604 + 38567374-38567391,38567505-38567636,38569377-385694... 29 1.7
12_02_0675 + 21814048-21814368 29 2.2
11_01_0365 - 2792467-2792793 29 2.2
12_01_0929 - 9229172-9229483,9230009-9230359 29 2.9
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793... 29 2.9
03_02_0444 - 8543426-8543635,8543945-8544151,8544293-8544400,854... 29 2.9
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 28 3.9
09_02_0146 + 4953007-4953297,4954105-4954341,4954592-4954669,495... 28 5.1
02_04_0443 - 22969690-22969700,22970561-22970642,22971484-229716... 28 5.1
10_08_0341 + 16942332-16942361,16942907-16943347 27 6.8
08_01_0619 + 5412058-5413224,5413357-5413476,5413755-5413831,541... 27 6.8
07_01_0204 + 1476517-1477047 27 6.8
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 27 6.8
03_05_0358 - 23438416-23439282,23440116-23440163,23440343-234403... 27 6.8
11_01_0506 - 3910532-3911335 27 8.9
09_04_0203 - 15556064-15556561,15557537-15557581,15557852-155582... 27 8.9
06_03_0418 + 20581420-20583207,20583243-20583254 27 8.9
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 27 8.9
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 27 8.9
03_01_0107 + 849489-850652,850745-850835,850926-851083,851180-85... 27 8.9
02_02_0202 - 7742137-7744636,7744760-7744973,7745755-7745797 27 8.9
>03_05_1019 +
29736644-29736709,29737156-29737515,29737595-29737735,
29737912-29738044,29738344-29738457,29738553-29738701,
29740815-29740907,29741019-29741079,29741180-29741512,
29742149-29742224,29742322-29742421,29743300-29743369,
29743987-29744082,29744355-29744402,29744427-29744658,
29745186-29745246,29745265-29745375
Length = 747
Score = 38.7 bits (86), Expect = 0.003
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 288 CPSNCSGHGVCNSEGHCHCE 347
CP+ C+GHG+C + G C CE
Sbjct: 568 CPAKCTGHGICKANGICECE 587
>10_08_1005 -
22179407-22180122,22180210-22180653,22180737-22180861,
22180939-22181169,22181250-22181805,22181896-22182312,
22182405-22183216,22183653-22183738,22184464-22184534,
22184553-22185573,22186018-22186062,22186252-22186326,
22186797-22186871
Length = 1557
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/81 (24%), Positives = 42/81 (51%)
Frame = -3
Query: 399 PRSHQGRARHTVAARIRLHSDSDPRSYRRRARNSWTGRSTSXC*LSSPDGLNGHAPLFQA 220
P+S + A +T+++ RL PR++ +R + + +S++ + SPD + +
Sbjct: 646 PKSCKRYAENTLSSTPRLLKADSPRNHDVFSREN-SFKSSNKGSIKSPDNAPMRSQAVNS 704
Query: 219 HLVLPAGGSVGHEAGIXSPSP 157
+ LP S+G+ A + +P P
Sbjct: 705 SVTLPRSYSLGNLANVKTPGP 725
>02_01_0129 -
934865-935152,935241-935490,935965-936105,937175-937707
Length = 403
Score = 31.5 bits (68), Expect = 0.42
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 128 IPCRTAIIDLGLGXWIPASCPTEPPAGSTRCA*NKGA--CP 244
+PC A D G W+P P PP ++ C ++ A CP
Sbjct: 40 LPCGAAPSDATAGRWVPTREPLPPPLYTSSCPFHRNAWNCP 80
>05_02_0037 + 5883285-5884292
Length = 335
Score = 31.1 bits (67), Expect = 0.55
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -3
Query: 201 GGSVGHEAGIXSPSPKSMMAVRHGIIVPLLLMNTAETAATESMPNSSFSLRCLHCSRPQR 22
GG G A +P+P +++ HG + + + AA+ S P+SS S R H + +
Sbjct: 8 GGGAGLLAVAAAPAPAAVLTTMHGRELSHSSCSFSSAAASLSSPSSSTSSRSYHAAMSGK 67
Query: 21 ASS 13
+ S
Sbjct: 68 SLS 70
>04_04_1076 -
30639835-30640898,30641613-30641915,30642008-30642068,
30643076-30644380
Length = 910
Score = 30.7 bits (66), Expect = 0.73
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 469 PRKITYIATMKFLWMVGSVAGPESTE-PPGPGKAH 368
PR + +AT+ W+ AGP+ E P G G+AH
Sbjct: 269 PRCTSLVATLGLTWLCFRRAGPDGEEGPRGDGRAH 303
>03_01_0527 +
3960982-3961290,3961371-3961464,3961898-3962084,
3962194-3962449,3962561-3962773,3962856-3962942,
3963089-3963223,3963296-3963409,3963507-3963754,
3963824-3963904,3963979-3964210,3964340-3964438,
3964513-3964701,3964928-3965023
Length = 779
Score = 30.7 bits (66), Expect = 0.73
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +3
Query: 288 CPSNCSGHGVCNSE-GHCHC 344
C +C+G GVCN E G C C
Sbjct: 110 CEQDCNGQGVCNYELGECRC 129
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 288 CPSNCSGHGVCNSEGHCHCE 347
C + CSGHG C G C C+
Sbjct: 266 CINQCSGHGHCRG-GFCQCD 284
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 30.7 bits (66), Expect = 0.73
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -3
Query: 420 GRWPDRSPRSHQGRARHTVAARIRLHSDSDPRSYRRRARNSWTGRS 283
GR RSP +GR+R +R R S S +S RR +RN RS
Sbjct: 137 GRSYSRSPSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRS 182
>07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708
Length = 2033
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 410 RTGVHGATRAGQGTQWRRESG-FTVTVTLGVTDAVPGTVGRADRRVXVDYRLPT 252
RTG+ GAT + +G WR +G +T LGV DA VG V +PT
Sbjct: 408 RTGLGGATLSAEGV-WRASTGQLCMTGCLGVIDA--AAVGDEACHYRVSLHVPT 458
>02_05_0460 - 29224525-29224620,29225525-29226625
Length = 398
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = -1
Query: 515 SSIHEEHDE-QNRRYDA----EEDHVHRDHEVPLDGRVGGRTGVHGAT 387
S +H H Q RR +A + H+ R HE +G +GG G H A+
Sbjct: 89 SYLHAAHHHGQGRRVEAPGGESQHHLQRHHEPARNGVLGGVAGAHAAS 136
>01_06_1604 +
38567374-38567391,38567505-38567636,38569377-38569445,
38569545-38569775,38570883-38571013,38571471-38571629,
38573078-38573366
Length = 342
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 305 GTVGRADRRVXVDYRLPTDSTDTHLCFKHILCSPQAAPSGTRP 177
G + RR +LP ++T H+L +P AAP GTRP
Sbjct: 268 GRIASRRRRGAEREQLPLENTSKDT---HMLATPAAAPDGTRP 307
>12_02_0675 + 21814048-21814368
Length = 106
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -2
Query: 424 VGSVAGPESTEPPGPGKAHSGGANPASQ*Q*PSEL--QTPCPEQLDGQIDE*XLTIVSRR 251
VGS P PP PG H P + + P+E+ Q CP L Q T +++
Sbjct: 25 VGSRGPPPGGLPPTPGGVHLRRKGPYRRPRKPTEVRSQAKCPGDLRAQSRALKATELAQG 84
Query: 250 TQRTRTFV 227
+R R+++
Sbjct: 85 PRRIRSWL 92
>11_01_0365 - 2792467-2792793
Length = 108
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 443 HEVPLDGRVGGRTGVHGATRAGQGTQWRRESGFTVTVTLG---VTDAVPG 303
H + G+ GGR ++R G GTQ + G T V +G V VPG
Sbjct: 58 HTRQMGGKRGGRMARSTSSRRGTGTQGAQADGATDEVEVGREEVAGEVPG 107
>12_01_0929 - 9229172-9229483,9230009-9230359
Length = 220
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 405 RSPRSHQGRARHTVAARIRLHSDSDPRSYRRRARNSWTG 289
RS R+H+ R A + +DS PR R ARNS TG
Sbjct: 104 RSKRNHRNFERKITYACRKTLADSRPRVKGRFARNSTTG 142
>06_02_0251 -
13478902-13478952,13478989-13479055,13479168-13479379,
13480144-13481540,13481574-13482432,13482537-13482836
Length = 961
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = -1
Query: 431 LDGRVGGRTGVHGATRAGQGTQWRRESGFTVTVTLGVTDAVPGTVGR 291
LD G G+ T ++W E G V V LGV PG VGR
Sbjct: 116 LDREPGISGGLDAVTSGNIVSKWNLEGGSDV-VGLGVAQTGPGIVGR 161
>03_02_0444 -
8543426-8543635,8543945-8544151,8544293-8544400,
8544744-8544803,8544914-8544989,8545190-8545347,
8545479-8545541,8545653-8545737,8546423-8547438
Length = 660
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 295 PTVPGTASVTPRVTVTVKPDSRRHCVPCPAL-VAPWTPVRPPTRPSKG 435
P++P A+ P + P S P P L V PW P RP R + G
Sbjct: 148 PSLPAPAAA-PVLPAKETPRSVAIEAPAPLLRVDPWEPARPDVRKASG 194
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 442 MKFLWMVGSVAGPESTEPPGPGKAHSGGANPAS 344
M L + G A P PP P + SG A+PA+
Sbjct: 278 MPALSVCGRAAAPPPPPPPPPARRTSGAASPAA 310
>09_02_0146 +
4953007-4953297,4954105-4954341,4954592-4954669,
4954991-4955167,4955705-4955761,4955988-4956174,
4956910-4957055,4957213-4957395,4957860-4957970,
4959386-4959505,4959596-4959740,4960001-4960164,
4960816-4960902,4961062-4961390,4963426-4963507,
4963616-4963746,4963976-4964225,4965112-4965393,
4966780-4966986
Length = 1087
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 402 SGPATDPTIQRNFMVAMYVIFLGIIPSVLLVMFLVYTR 515
S P+ I+ N + +FL IP +L + FLV+TR
Sbjct: 686 SVPSVLSAIESNLRLPRAFMFLCFIPVLLFLAFLVFTR 723
>02_04_0443 -
22969690-22969700,22970561-22970642,22971484-22971601,
22973513-22973740,22973948-22974231
Length = 240
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 428 DGRVGGRTGVHGATRAGQGTQWRRES 351
+G GRT +HG+ G+ WRRE+
Sbjct: 132 EGVADGRTWLHGSDWRGRRPAWRREA 157
>10_08_0341 + 16942332-16942361,16942907-16943347
Length = 156
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 95 SAVFINNNGTIIPCRTAIIDLGLGXWIPASCPTEPPAGST 214
S+V+ + + P I + L WIP+S P + P+ T
Sbjct: 3 SSVYTLHTASAAPRAVTIFGILLPSWIPSSSPPQGPSSET 42
>08_01_0619 +
5412058-5413224,5413357-5413476,5413755-5413831,
5414201-5414321
Length = 494
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 349 PDSRRHCVPCPALVAPWTPVRPP 417
P+ RRH P P++ P P RPP
Sbjct: 35 PNPRRHHRPSPSIPPPPPPQRPP 57
>07_01_0204 + 1476517-1477047
Length = 176
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 23 RCGLLQCRHLNEKLEFGMDSVAAVSAVFINNNGTIIPC 136
R LL+C H + + S+ SA N G II C
Sbjct: 125 RGALLECGHYTQVVWRSTTSIGCASAACSNGGGVIISC 162
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 405 RSPRSHQGRARHTVAARIRLHSDSDPRSYR-RRARNSWTG 289
RSP+ Q R+R AR R PRS R RRA++ G
Sbjct: 303 RSPKQAQSRSRSPSPARKRESRSPSPRSKRLRRAQSEREG 342
>03_05_0358 -
23438416-23439282,23440116-23440163,23440343-23440382,
23440459-23440610
Length = 368
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 425 GRVGGRTGVHGATRAGQGTQWRRESG 348
G VGGR G GAT G+ WR G
Sbjct: 239 GGVGGRLGARGATDGGR-PAWRERRG 263
>11_01_0506 - 3910532-3911335
Length = 267
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -1
Query: 491 EQNRRYDAEEDHVHRDHEVPLDGRVGGRTGVHGATRAGQGTQWRRESGFTVTVTL 327
E A VH DHE G GGR V A + G G WR + G +T+
Sbjct: 100 EHGHATSAHAFFVH-DHESVGGGGGGGRRKVQRAVKNGGGV-WRIQKGEVAILTI 152
>09_04_0203 -
15556064-15556561,15557537-15557581,15557852-15558258,
15558538-15558841,15559421-15560757,15561492-15561750
Length = 949
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 380 GQGTQWRRESGFTVTVTLGVTDAVPGTVG-RADRRVXVDYRLP 255
GQG + F V LGV DA G + R +R VD+ LP
Sbjct: 514 GQGVNSGSYNDFVYQVHLGVYDAAIGDITIRYNRTSYVDFTLP 556
>06_03_0418 + 20581420-20583207,20583243-20583254
Length = 599
Score = 27.1 bits (57), Expect = 8.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 291 PSNCSGHGVCNSEGHCHC 344
P C +G+C+ G+C C
Sbjct: 322 PMACGSYGICSGAGNCSC 339
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 425 GRVGGRTGVHGATRAGQGTQWRRESGFTV 339
GR GG G R G+G WRR + V
Sbjct: 516 GRGGGGAEADGGARRGRGGGWRRTATLVV 544
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 163 QSQIDDGRPARYYRTIIVDEHRRDGRH 83
+S + GR +R R++ +EHR GRH
Sbjct: 237 ESNGESGRSSRRGRSVSPEEHRHRGRH 263
>03_01_0107 +
849489-850652,850745-850835,850926-851083,851180-851231,
852373-852452,852540-852633,852711-853231,854087-854202,
854242-854293
Length = 775
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 482 RRYDAEEDHVHRDHEVPLDGR 420
R YDA E+H+ + +V L+GR
Sbjct: 483 RHYDASENHLELESQVALNGR 503
>02_02_0202 - 7742137-7744636,7744760-7744973,7745755-7745797
Length = 918
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 289 ARPTVPGTASVTPRVTVTVKPDSRRHCVPCPALVAPWTPV--RPPTR 423
A T P TP +++ + VP +PWTP RPPT+
Sbjct: 22 APSTAPAQVRPTPSRRRSLQHSALHSFVPLSVDCSPWTPADRRPPTQ 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,266,576
Number of Sequences: 37544
Number of extensions: 373696
Number of successful extensions: 1771
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1768
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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