Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30412
(515 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 31 0.65
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 31 0.65
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 30 0.85
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 1.5
AL132948-8|CAC51068.1| 230|Caenorhabditis elegans Hypothetical ... 29 2.6
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 29 2.6
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 28 3.4
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 28 3.4
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 28 3.4
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 28 4.6
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 28 4.6
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 28 4.6
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical pr... 27 6.0
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 27 6.0
AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and inte... 27 6.0
AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and inte... 27 6.0
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 27 6.0
AF077541-3|AAM54172.1| 750|Caenorhabditis elegans Alpha-catulin... 27 6.0
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 27 8.0
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 46.8 bits (106), Expect = 9e-06
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 157 GTGRXDPGLVPDGAACGEHKMCLKQRCVSVESV 255
G DPGLVPDGA CGE +MC+ Q+C E +
Sbjct: 585 GLNAPDPGLVPDGAICGEEQMCIGQKCHKKEKI 617
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +3
Query: 288 CPSNCSGHGVCNSEGHCHCEXXXXXXXXXXXXXXXSVDSGPA---TDPTIQRNFMV--AM 452
C NC+ GVCN+ G+CHCE SV+S A T+ F+V +
Sbjct: 624 CLDNCNFRGVCNNVGNCHCERGFGGIACEIPGYGGSVNSNEAYRFRGITLSSTFLVFFCL 683
Query: 453 YVIFLG 470
+ IF+G
Sbjct: 684 FGIFIG 689
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 5 CAYEDARCGLLQCRHLNEKLEFG 73
C E+A+CGLLQC E+ FG
Sbjct: 530 CETENAKCGLLQCETQAERPVFG 552
>Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 46.8 bits (106), Expect = 9e-06
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 157 GTGRXDPGLVPDGAACGEHKMCLKQRCVSVESV 255
G DPGLVPDGA CGE +MC+ Q+C E +
Sbjct: 585 GLNAPDPGLVPDGAICGEEQMCIGQKCHKKEKI 617
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +3
Query: 288 CPSNCSGHGVCNSEGHCHCEXXXXXXXXXXXXXXXSVDSGPA---TDPTIQRNFMV--AM 452
C NC+ GVCN+ G+CHCE SV+S A T+ F+V +
Sbjct: 624 CLDNCNFRGVCNNVGNCHCERGFGGIACEIPGYGGSVNSNEAYRFRGITLSSTFLVFFCL 683
Query: 453 YVIFLG 470
+ IF+G
Sbjct: 684 FGIFIG 689
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 5 CAYEDARCGLLQCRHLNEKLEFG 73
C E+A+CGLLQC E+ FG
Sbjct: 530 CETENAKCGLLQCETQAERPVFG 552
>Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical
protein F16B12.2 protein.
Length = 259
Score = 31.1 bits (67), Expect = 0.49
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 288 CPSNCSGHGVCNSEGHCHC 344
CP NC HG C G C C
Sbjct: 62 CPFNCHNHGSCEVPGKCMC 80
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
protein F33C8.1b protein.
Length = 1234
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 267 VNXHSSICPSNCSGHGVCNSEGHCHCE 347
V+ S+ C NCS HG C G C CE
Sbjct: 198 VSYESNRCAYNCSNHGSC-LNGKCDCE 223
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
protein F33C8.1a protein.
Length = 1271
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 267 VNXHSSICPSNCSGHGVCNSEGHCHCE 347
V+ S+ C NCS HG C G C CE
Sbjct: 198 VSYESNRCAYNCSNHGSC-LNGKCDCE 223
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
protein.
Length = 1329
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 267 VNXHSSICPSNCSGHGVCNSEGHCHCE 347
V+ S+ C NCS HG C G C CE
Sbjct: 198 VSYESNRCAYNCSNHGSC-LNGKCDCE 223
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 30.3 bits (65), Expect = 0.85
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 288 CPSNCSGHGVCNSEGHCHCE 347
C +NC+GHG C C C+
Sbjct: 827 CLTNCTGHGKCIQPNSCECD 846
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +1
Query: 295 PTVPGTASVTPRVTVTVKPDSRRHCVPCPALVAPWTPVRPPTRPSKGT 438
PT P T TP T+K P P TP P T S T
Sbjct: 162 PTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 209
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +1
Query: 295 PTVPGTASVTPRVTVTVKPDSRRHCVPCPALVAPWTPVRPPTRPSKGT 438
PT P T TP T+K P P TP P T S T
Sbjct: 276 PTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 323
>AL132948-8|CAC51068.1| 230|Caenorhabditis elegans Hypothetical
protein Y39B6A.9 protein.
Length = 230
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 497 HDEQNRRYDAEEDHVHRDHEVPLD-GRVGGRTGVHGATRAGQGTQWRRES 351
HD++ YD +ED H+ H D G+ G + G G + G W+ E+
Sbjct: 165 HDDKYTSYD-KEDAGHKKHHDKYDIGKYGAKQG--GYAKQGHEEGWKNEA 211
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 434 PLDGRVGGRTGVHGATRAGQGTQWRRESGFTVTVTLG-VTDAVPGTVG 294
P+ G GG G G+T Q + +GFT+ + T A+ GT+G
Sbjct: 564 PVTGGTGGTMGPMGSTGVTQASPVTGATGFTMPTGISQSTPAIGGTMG 611
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 285 ICPSNCSGHGVCNSEGHCHC 344
+C SNC+ G C G CHC
Sbjct: 316 VCESNCNQRGEC-VHGKCHC 334
Score = 27.5 bits (58), Expect = 6.0
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 294 SNCSGHGVCNSEGHCHC 344
++C+G G C+++G C C
Sbjct: 384 ADCNGRGRCDTDGRCRC 400
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 285 ICPSNCSGHGVCNSEGHCHC 344
+C SNC+ G C G CHC
Sbjct: 258 VCESNCNQRGEC-VHGKCHC 276
Score = 27.5 bits (58), Expect = 6.0
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 294 SNCSGHGVCNSEGHCHC 344
++C+G G C+++G C C
Sbjct: 326 ADCNGRGRCDTDGRCRC 342
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 285 ICPSNCSGHGVCNSEGHCHC 344
+C SNC+ G C G CHC
Sbjct: 440 VCESNCNQRGEC-VHGKCHC 458
Score = 27.5 bits (58), Expect = 6.0
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 294 SNCSGHGVCNSEGHCHC 344
++C+G G C+++G C C
Sbjct: 508 ADCNGRGRCDTDGRCRC 524
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 27.9 bits (59), Expect = 4.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 66 SSAWTRWRPSRRCSSTIMVR 125
SS+W+ W P CS+ +M+R
Sbjct: 28 SSSWSMWSPWSFCSNNLMIR 47
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 5/27 (18%)
Frame = +3
Query: 279 SSICPSN-----CSGHGVCNSEGHCHC 344
++ CP+N CSGHG C + C C
Sbjct: 663 ATACPTNNLALLCSGHGHCTTTARCVC 689
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 2 PCAYEDARCGLLQC 43
PC ED RCG L C
Sbjct: 585 PCQIEDTRCGTLHC 598
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 178 GLVPDGAACGEHKMCLKQRCVSVESV 255
GL DG C ++C+ CV + SV
Sbjct: 635 GLTSDGTNCASGRVCVAGSCVEMSSV 660
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 5/27 (18%)
Frame = +3
Query: 279 SSICPSN-----CSGHGVCNSEGHCHC 344
++ CP+N CSGHG C + C C
Sbjct: 663 ATACPTNNLALLCSGHGHCTTTARCVC 689
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 2 PCAYEDARCGLLQC 43
PC ED RCG L C
Sbjct: 585 PCQIEDTRCGTLHC 598
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 178 GLVPDGAACGEHKMCLKQRCVSVESV 255
GL DG C ++C+ CV + SV
Sbjct: 635 GLTSDGTNCASGRVCVAGSCVEMSSV 660
>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical
protein F13B10.1c protein.
Length = 1000
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 295 PTVPGTASVTPRVTVTVKPDSRRHCVPCPALVAPWT 402
P+VPG+ P ++V + P S PCP AP T
Sbjct: 100 PSVPGSPVDPPSISVPLPPKS---APPCPTQPAPLT 132
>Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical
protein F13B10.1a protein.
Length = 930
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 295 PTVPGTASVTPRVTVTVKPDSRRHCVPCPALVAPWT 402
P+VPG+ P ++V + P S PCP AP T
Sbjct: 46 PSVPGSPVDPPSISVPLPPKS---APPCPTQPAPLT 78
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 266 YRLPTDSTDTHLCFKHIL 213
Y LP+ STD H+CF++ +
Sbjct: 1140 YELPSVSTDLHICFENAI 1157
>AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform c protein.
Length = 984
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 295 PTVPGTASVTPRVTVTVKPDSRRHCVPCPALVAPWT 402
P+VPG+ P ++V + P S PCP AP T
Sbjct: 100 PSVPGSPVDPPSISVPLPPKS---APPCPTQPAPLT 132
>AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform a protein.
Length = 931
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 295 PTVPGTASVTPRVTVTVKPDSRRHCVPCPALVAPWT 402
P+VPG+ P ++V + P S PCP AP T
Sbjct: 47 PSVPGSPVDPPSISVPLPPKS---APPCPTQPAPLT 79
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 432 RNFMVAMYVIFLGIIPSVLLVMFLV 506
R + +A YV L +IP++LLV+F++
Sbjct: 194 REWRLATYVSSLSLIPALLLVIFVI 218
>AF077541-3|AAM54172.1| 750|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform d protein.
Length = 750
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 425 GRVGGRTGVHGATRAGQGTQWRR 357
G V GRTG G + + T WRR
Sbjct: 703 GSVNGRTGADGERTSRESTVWRR 725
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 187 PDGAACGEHKMCLKQRC 237
PDGA CG + C+K C
Sbjct: 565 PDGAPCGPGQYCIKGEC 581
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 12 TRTRAVACCSADTSMRSWSSAWTRWRPSRRCSSTI 116
T T +A CSAD S++ W TR P C T+
Sbjct: 286 TETGLLASCSADGSIKLWD---TRSAPKDACVCTV 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,455,110
Number of Sequences: 27780
Number of extensions: 269038
Number of successful extensions: 1173
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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