Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30411
(538 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase fa... 32 0.28
At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase fa... 32 0.28
At2g24030.2 68415.m02870 expressed protein and genefinder 29 2.0
At2g24030.1 68415.m02871 expressed protein and genefinder 29 2.0
At5g25900.1 68418.m03075 ent-kaurene oxidase, putative (GA3) / c... 27 6.0
At5g13630.1 68418.m01580 magnesium-chelatase subunit chlH, chlor... 27 6.0
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi... 27 6.0
At5g64230.1 68418.m08068 expressed protein 27 7.9
At3g49080.1 68416.m05362 ribosomal protein S9 family protein con... 27 7.9
At3g03200.1 68416.m00316 no apical meristem (NAM) family protein... 27 7.9
At2g40400.2 68415.m04982 expressed protein similar to GI:7572912... 27 7.9
At2g40400.1 68415.m04981 expressed protein similar to GI:7572912... 27 7.9
>At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase family
protein contains similarity to phosphatidylinositol
4-kinase 230 GI:2326227 from [Homo sapiens], from [Bos
taurus] GI:2198791; contains Pfam profiles PF00454:
Phosphatidylinositol 3- and 4-kinase, PF00613:
Phosphoinositide 3-kinase family, accessory domain
Length = 2028
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 379 LPRDPRREGRRAELEEVDLQGD 444
LP++ RR G R ELE++++QGD
Sbjct: 1696 LPKEERRAGIRRELEKIEMQGD 1717
>At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase family
protein contains similarity to phosphatidylinositol
4-kinase 230 GI:2326227 from [Homo sapiens], from [Bos
taurus] GI:2198791; contains Pfam profiles PF00454:
Phosphatidylinositol 3- and 4-kinase, PF00613:
Phosphoinositide 3-kinase family, accessory domain
Length = 2028
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 379 LPRDPRREGRRAELEEVDLQGD 444
LP++ RR G R ELE++++QGD
Sbjct: 1696 LPKEERRAGIRRELEKIEMQGD 1717
>At2g24030.2 68415.m02870 expressed protein and genefinder
Length = 374
Score = 29.1 bits (62), Expect = 2.0
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 283 TLQSPQLALQQK*PHRGTFELQICG*ADSARVLPR-DPRREGRRAELEEVDLQGDLAARR 459
T+Q P+L QQ GT L+ + VL R DP E R+AE + L DL +R
Sbjct: 113 TMQLPKL--QQMPEATGTSVLE--SNKEQFIVLARADPVGEKRKAEDIQTGLNEDLQVKR 168
Query: 460 PRARVLQVAELSRTVG 507
P+A+ + +S G
Sbjct: 169 PKAKESEAKAMSLETG 184
>At2g24030.1 68415.m02871 expressed protein and genefinder
Length = 455
Score = 29.1 bits (62), Expect = 2.0
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 283 TLQSPQLALQQK*PHRGTFELQICG*ADSARVLPR-DPRREGRRAELEEVDLQGDLAARR 459
T+Q P+L QQ GT L+ + VL R DP E R+AE + L DL +R
Sbjct: 194 TMQLPKL--QQMPEATGTSVLE--SNKEQFIVLARADPVGEKRKAEDIQTGLNEDLQVKR 249
Query: 460 PRARVLQVAELSRTVG 507
P+A+ + +S G
Sbjct: 250 PKAKESEAKAMSLETG 265
>At5g25900.1 68418.m03075 ent-kaurene oxidase, putative (GA3) /
cytochrome P450 identical to GA3 [Arabidopsis thaliana]
GI:3342249; similar to ent-kaurene oxidase [Cucurbita
maxima] GI:11934675; contains Pfam profile PF00067:
Cytochrome P450
Length = 509
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 302 LHYNRNNHIEVPSNFRYVVEQTLREFFRAIQGGKDAEQSWKKSIYKVISR 451
LH + +H + P NFR + E L GKD E + K + +S+
Sbjct: 171 LHAHARDHPQEPVNFRAIFEHELFGVALKQAFGKDVESIYVKELGVTLSK 220
>At5g13630.1 68418.m01580 magnesium-chelatase subunit chlH,
chloroplast, putative / Mg-protoporphyrin IX chelatase,
putative (CHLH) nearly identical to magnesium chelatase
subunit GI:1154627 from [Arabidopsis thaliana]; contains
Pfam profile: PF02514 CobN/magnesium chelatase family
protein
Length = 1381
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 437 KVISRLDDPVPEYFKLPNFLEQLEERGAD 523
K+++ LD+PV + F + LEQ E G D
Sbjct: 1106 KMVAELDEPVEQNFVRKHALEQAEALGID 1134
>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 883
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = +2
Query: 344 FRYVVEQTLREFFRAIQGGKDAEQSWKK------SIYKVISRLDDPVPEYFKLPNFLEQL 505
F+ +E + +F +AIQ A ++WK+ ++ + + ++D PN + L
Sbjct: 343 FQRELESAIADFTKAIQSNPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVL 402
Query: 506 EERG 517
ERG
Sbjct: 403 HERG 406
>At5g64230.1 68418.m08068 expressed protein
Length = 379
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/39 (25%), Positives = 26/39 (66%)
Frame = -1
Query: 328 DVVISVVMQVEDSVKFRVTGNMQVLAAFRPSLIACRAYF 212
+++++VV+ ++S+ +++GN ++L R L+ C +F
Sbjct: 16 NIIVAVVVFADESL-LQISGNSKLLEKLRVFLVTCFLFF 53
>At3g49080.1 68416.m05362 ribosomal protein S9 family protein
contains Pfam profile PF00380: ribosomal protein S9
Length = 430
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 397 REGRRAELEEVDLQGDLAARRPRARVLQVAELSRTVGGARRR 522
++ RAE+E + +Q D+A +ARV QV E R G RR+
Sbjct: 277 KKSSRAEIE-LQMQEDIA----KARVRQVDETGRAYGTGRRK 313
>At3g03200.1 68416.m00316 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) {Arabidopsis thaliana}
Length = 479
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 221 SASDQRRSEGGQDLHVAGDSELYRVLNLHYNRNNHIEVPSNFRYVVEQTLR 373
S S+ S G Q +HV E N H N+ N+I Y+ EQ +R
Sbjct: 284 SNSNHNNSVGDQVIHVGNYDEQLITSNRHMNQ-NYIYAFEKTGYIKEQKIR 333
>At2g40400.2 68415.m04982 expressed protein similar to GI:7572912
(At3g56140)[Arabidopsis thaliana]
Length = 735
Score = 27.1 bits (57), Expect = 7.9
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 367 SARVLPRDPRREGRRAELEE--VDLQGDLAARRPRARVLQVAELSRTVGGARRRRDA 531
S V+ DP R+ R E E D AAR AE++R + A RRRDA
Sbjct: 371 SQLVVLLDPERQFLRKEGESPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDA 427
>At2g40400.1 68415.m04981 expressed protein similar to GI:7572912
(At3g56140)[Arabidopsis thaliana]
Length = 735
Score = 27.1 bits (57), Expect = 7.9
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 367 SARVLPRDPRREGRRAELEE--VDLQGDLAARRPRARVLQVAELSRTVGGARRRRDA 531
S V+ DP R+ R E E D AAR AE++R + A RRRDA
Sbjct: 371 SQLVVLLDPERQFLRKEGESPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDA 427
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,153,172
Number of Sequences: 28952
Number of extensions: 185705
Number of successful extensions: 585
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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