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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30410
         (437 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649     29   1.2  
01_01_0355 + 2810340-2813112,2813213-2813637                           29   1.2  
06_01_0772 + 5770502-5770619,5771035-5772335                           28   2.9  
05_03_0618 - 16262826-16263097,16263111-16263183                       28   2.9  
03_02_0950 + 12661008-12662312,12662403-12662576                       28   2.9  
11_06_0198 - 21158350-21159528                                         28   3.8  
08_01_0692 + 6121443-6122266,6122812-6124798                           28   3.8  
04_03_0641 + 18261332-18262423                                         28   3.8  
01_07_0312 + 42677752-42678561,42678701-42678910,42679597-426797...    28   3.8  
01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464     28   3.8  
03_05_1097 + 30393336-30393578,30393661-30393780,30393859-303940...    27   5.0  
11_02_0004 + 7260084-7260967,7261284-7263264,7263359-7263420,726...    27   6.6  
04_04_1113 - 30986757-30986780,30986781-30987273,30987437-309879...    27   6.6  
04_03_1035 - 21887562-21890030                                         27   6.6  
12_02_0795 + 23217463-23217684,23218296-23219155,23220001-232209...    27   8.7  
08_01_0693 + 6131714-6132531,6133038-6135027                           27   8.7  

>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
          Length = 461

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 392 LVDQLEGVMVPFVYELDSLLGEDHSKLDG 306
           +V    GVM P + +L  LLGE+++KL G
Sbjct: 7   IVGATTGVMKPLLSKLTKLLGEEYAKLKG 35


>01_01_0355 + 2810340-2813112,2813213-2813637
          Length = 1065

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -1

Query: 431 FGSHRMQFCWWFLLVDQLEGVMVPFVYELDSLLGED--HSKLDGEVRFD 291
           FGS+  +  +  +  + L G +   +Y L SL+G D  ++KLDG +  D
Sbjct: 216 FGSNMPRLYFLDICSNNLSGALPSSLYNLSSLMGFDAGNNKLDGSIATD 264


>06_01_0772 + 5770502-5770619,5771035-5772335
          Length = 472

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 248 WTCLPVMDKGWKGNRQILLP--HPV*SDLHRADCQAHKQKGPSRPQV 382
           W+ LP+++ G+ G   + LP  +   +D HR  C    Q    R Q+
Sbjct: 399 WSALPLLEIGFAGGAALALPPRNVFYNDPHRGLCMTFAQNPALRSQI 445


>05_03_0618 - 16262826-16263097,16263111-16263183
          Length = 114

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 93  SSWCKCGVRSQRTHGEDEGKQSQSHLGAV 7
           S  C+CG+RS+R    +E +  +  LG V
Sbjct: 24  SGHCRCGLRSRRCTAREEFRSKEEMLGIV 52


>03_02_0950 + 12661008-12662312,12662403-12662576
          Length = 492

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 97  DVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEV 198
           +VL+ +      +GEY+ AIA CS+ L++ K  V
Sbjct: 411 EVLSSRASSYKEVGEYKKAIADCSKVLEKDKDNV 444


>11_06_0198 - 21158350-21159528
          Length = 392

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 123 ECRHW*IRDRYRQML*ISEGKEGRGYQGSREXSDRKRQEEHH 248
           +CR W  R +  +   + E +E   Y G RE   RKR + HH
Sbjct: 275 DCRQW--RRQEEEEAAVDE-EEDHNYGGEREQHCRKRCQHHH 313


>08_01_0692 + 6121443-6122266,6122812-6124798
          Length = 936

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -1

Query: 395 LLVDQLEGVMVPFVYELDSLLGEDHSKLDGEVRFDDFL 282
           ++V    GVM P + +L +L+G+++ KL G  +   FL
Sbjct: 7   IVVSASMGVMKPLLAKLTTLMGDEYKKLKGVRKQVSFL 44


>04_03_0641 + 18261332-18262423
          Length = 363

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -1

Query: 272 CP*LVGKSMVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSS 93
           CP L     +  LP S+R+   SL+  P   F  + HLA +V+   +   + SC     S
Sbjct: 267 CPNL-NTRRIMTLPSSLRKL--SLLGCPSIEFIDNSHLASSVTLKGLNLKLVSC-PDLIS 322

Query: 92  VLGA 81
           ++GA
Sbjct: 323 IVGA 326


>01_07_0312 +
           42677752-42678561,42678701-42678910,42679597-42679704,
           42679915-42680010,42680090-42680182,42680276-42680386,
           42680482-42680514,42680592-42680642,42680960-42681037,
           42681145-42681165
          Length = 536

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 158 AIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANK 30
           A+  + S M T+ + C+AS +S +    ALE  A    ++ NK
Sbjct: 465 ALENNCSHMETVFHVCTASVTSEIAEDKALELIAKAVESRMNK 507


>01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464
          Length = 504

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
 Frame = +3

Query: 141 IRDRYRQML*ISEGKEGRGYQGSREXSDRKRQ-EEHHGLAYQLWTKDGKEIVKSYFPIQF 317
           I+D+YR+M+    G  G  ++G R      RQ         + W + G+  V        
Sbjct: 166 IKDKYRRMVPRDRGSRGERFRGERFDKPEVRQWSRQENWGRKTWKEAGESTVPKMVGQGV 225

Query: 318 RVIFTEQTVKLINKRDHHALKLIDQQKPPTKLHSVTSKDK 437
             +       +  +RD +AL +  Q+     + +   KDK
Sbjct: 226 YGVGPVLAALMAERRDFYALYI--QEGMDFSVSNKKKKDK 263


>03_05_1097 +
           30393336-30393578,30393661-30393780,30393859-30394017,
           30394184-30394225,30394336-30394508,30394600-30394705,
           30394795-30394824
          Length = 290

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = +2

Query: 29  LCLPSSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 157
           LC P  +  +RW  TP +  +++  W+  C  +++   T+ ++
Sbjct: 204 LCTPQPT-IIRWSTTPPVSADVLHQWKGFCALIANAYYTKGMA 245


>11_02_0004 +
           7260084-7260967,7261284-7263264,7263359-7263420,
           7263614-7263686
          Length = 999

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1

Query: 395 LLVDQLEGVMVPFVYELDSLLGEDHSKLDG 306
           ++V  L GVM P + +L  L+ +++SKL G
Sbjct: 8   MMVSALTGVMSPVLGKLAGLMEQEYSKLRG 37


>04_04_1113 -
           30986757-30986780,30986781-30987273,30987437-30987959,
           30988361-30988615,30988812-30988926,30989026-30989078,
           30989213-30989265,30989419-30989473,30989549-30989599,
           30989776-30990024,30990122-30990350,30990994-30991305
          Length = 803

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = -1

Query: 215 FTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKA 36
           F +S+ +  F+      +LA  ++   MTT I+ C    S  LG    L+   HT+R   
Sbjct: 367 FFSSIPSGVFWPVFLIANLAALIASRTMTTAIFQC-LKQSIALGCFPRLKI-IHTSRKFM 424

Query: 35  NKVSLILAQW 6
            K+ + +  W
Sbjct: 425 AKIYIPVVNW 434


>04_03_1035 - 21887562-21890030
          Length = 822

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 121 MSVVIGEYETAIAKCSEYLKEKKGEVIKEAVXRLIENGKRNT 246
           MS V+G  E A+A C EY +   G   + A+ R   +G   T
Sbjct: 781 MSEVVGVLERAVAACDEYEEGGAGAGGEPALSRSCTDGSTAT 822


>12_02_0795 +
           23217463-23217684,23218296-23219155,23220001-23220929,
           23221184-23221968
          Length = 931

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -1

Query: 392 LVDQLEGVMVPFVYELDSLLGEDHSKL---DGEVRF 294
           +   L GVM   + +L +LLG+++ KL    GEV F
Sbjct: 91  MASALTGVMTSVINKLTALLGKEYMKLKGVQGEVEF 126


>08_01_0693 + 6131714-6132531,6133038-6135027
          Length = 935

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 395 LLVDQLEGVMVPFVYELDSLLGEDHSKLDGEVRFDDFL 282
           ++V    GVM P + +L  L+G+++ KL G  +   FL
Sbjct: 5   MVVSASMGVMKPLLTKLTVLMGDEYKKLKGVRKQVSFL 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,388,516
Number of Sequences: 37544
Number of extensions: 246538
Number of successful extensions: 784
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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