Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30410
(437 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 31 0.37
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 31 0.37
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 31 0.48
U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucos... 29 1.1
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 29 1.1
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 29 1.1
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 29 1.1
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 1.5
Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 27 4.5
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 27 4.5
L15314-1|AAF99984.2| 728|Caenorhabditis elegans Anaphase promot... 27 4.5
U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosi... 27 6.0
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 27 6.0
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 27 7.9
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 27 7.9
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 7.9
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 31.1 bits (67), Expect = 0.37
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 206 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 27
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 26 S 24
S
Sbjct: 136 S 136
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 31.1 bits (67), Expect = 0.37
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 206 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 27
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 26 S 24
S
Sbjct: 136 S 136
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 30.7 bits (66), Expect = 0.48
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 115 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVXRLIE 228
LYM +G+Y+ A KC +Y K+ G+ EA+ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform c protein.
Length = 379
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 161 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 9
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 161 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 9
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 161 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 9
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 161 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 9
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 201 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 37
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical
protein C15H7.4 protein.
Length = 327
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 73 ATLAPRTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVXRLIENGK---RN 243
AT +P + L ++ +V G E +A + EKK EV+ + +EN K RN
Sbjct: 136 ATTSPTIESDLTDKPDTNVYTGSREGYVAPSEKGSNEKKKEVVPNGGDKSVENKKGSDRN 195
Query: 244 TMDLPT 261
P+
Sbjct: 196 VKKTPS 201
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 118 YMSVVIGEYETAIAKCSEYLKEKKGEVIK 204
Y+ ++ +E + KC+ Y EK GEV+K
Sbjct: 270 YVLMLCTLFEGGVEKCALYYPEKLGEVVK 298
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 118 YMSVVIGEYETAIAKCSEYLKEKKGEVIK 204
Y+ ++ +E + KC+ Y EK GEV+K
Sbjct: 271 YVLMLCTLFEGGVEKCALYYPEKLGEVVK 299
>L15314-1|AAF99984.2| 728|Caenorhabditis elegans Anaphase promoting
complex; seealso mat protein 2 protein.
Length = 728
Score = 27.5 bits (58), Expect = 4.5
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3
Query: 258 YQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALK----LIDQQKPPTKLHSVT 425
+Q+ +K+ E++ FP++FR + T + L+ +H + LIDQ + SV
Sbjct: 223 FQMLSKNAYEMIAVDFPVKFRSLITMKYC-LLRTNNHGRVDFTNYLIDQVNTKLLVASVD 281
Query: 426 SKD 434
+KD
Sbjct: 282 TKD 284
>U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosis
protein familyprotein 1 protein.
Length = 459
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -3
Query: 246 GVPLAVFDQTXHGFLDNLSLL---FLQIFRAFGDSGLVFTNDDTHIQLLRQ 103
G P+ V + G + +L L F+ +++GDS + T+ D HIQ L +
Sbjct: 58 GKPIFVNNDRNEGEIVSLVALICAFVSRCQSWGDSLMTMTSQDNHIQFLHK 108
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.1 bits (57), Expect = 6.0
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +2
Query: 11 APR*D*LCLPSSSP-CV-RWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 157
APR D +C+PS SP CV ++ L P + + T ++C V++L +RP+S
Sbjct: 259 APRCDSMCMPSCSPSCVQQYSLCPQQCRPMCT---NAC--VTNLQVSRPVS 304
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 215 FTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSAS 102
FT+S+I+SP R H A V Y P +L CS S
Sbjct: 786 FTSSVISSP----RRQLHSAPRVYYQPRPSLFSQCSVS 819
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -3
Query: 255 QVHGVPLAVFDQTXHGFLDNLSLLFLQI----FRAFGDSGLVFTNDDTHIQLLRQ 103
Q G+P +Q F N + L+I R GD+ +VFTN++ + L++
Sbjct: 8 QCRGLPWEATEQELRDFFGNNGIESLEIPRRNGRTSGDAKVVFTNEEDYNNALKK 62
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -3
Query: 255 QVHGVPLAVFDQTXHGFLDNLSLLFLQI----FRAFGDSGLVFTNDDTHIQLLRQ 103
Q G+P +Q F N + L+I R GD+ +VFTN++ + L++
Sbjct: 8 QCRGLPWEATEQELRDFFGNNGIESLEIPRRNGRTSGDAKVVFTNEEDYNNALKK 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,254,327
Number of Sequences: 27780
Number of extensions: 203107
Number of successful extensions: 692
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -