Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30410
         (437 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   2.6  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   3.4  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   3.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   3.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   3.4  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   3.4  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   3.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.9  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 270 TKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLID 389
           T + K+I K   P + ++I     V ++   DH    L+D
Sbjct: 124 TMENKDITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLD 163


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 151 AIAKCSEYLKEKKGEVIKEAVXRLIEN 231
           A+A   +   +K+ EVIK+ +  L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 320 SDLHRADCQAHKQKGPSRPQVDRPTKTTNKIAFGD 424
           SDL  ++  + +++  +RP    P   +NK   G+
Sbjct: 312 SDLSESETSSDEEEADTRPLKKEPITQSNKRTAGN 346


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +2

Query: 233 ARGTPWTCLPVMDKGWKGNRQILLP 307
           A   PW+ LP+ D     N  I  P
Sbjct: 88  ANEKPWSTLPIEDLTKSDNEDITYP 112


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +2

Query: 233 ARGTPWTCLPVMDKGWKGNRQILLP 307
           A   PW+ LP+ D     N  I  P
Sbjct: 126 ANEKPWSTLPIEDLTKSDNEDITYP 150


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 151 AIAKCSEYLKEKKGEVIKEAVXRLIEN 231
           A+A   +   +K+ EVIK+ +  L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 151 AIAKCSEYLKEKKGEVIKEAVXRLIEN 231
           A+A   +   +K+ EVIK+ +  L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 18  DETDFVCLRPRRVCA 62
           DE +F   RP+R C+
Sbjct: 576 DEVEFYKRRPQRACS 590


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,329
Number of Sequences: 438
Number of extensions: 2497
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)