Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30410
         (437 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g62250.2 68414.m07023 expressed protein                             30   0.59 
At1g62250.1 68414.m07022 expressed protein                             30   0.59 
At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A...    29   1.8  
At5g09400.1 68418.m01089 potassium transporter family protein si...    28   2.4  
At1g56660.1 68414.m06516 expressed protein                             28   2.4  
At1g53910.1 68414.m06137 AP2 domain-containing protein RAP2.12 (...    27   4.2  
At5g51650.1 68418.m06404 hypothetical protein                          27   5.5  
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ...    27   7.3  
At1g80900.1 68414.m09492 magnesium transporter CorA-like family ...    26   9.7  

>At1g62250.2 68414.m07023 expressed protein
          Length = 223

 Score = 30.3 bits (65), Expect = 0.59
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 29  LCLPSSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 157
           LC P  +  +RW  TP +  E+++ WR  C  +++    R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222


>At1g62250.1 68414.m07022 expressed protein
          Length = 267

 Score = 30.3 bits (65), Expect = 0.59
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 29  LCLPSSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 157
           LC P  +  +RW  TP +  E+++ WR  C  +++    R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222


>At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A19)
           Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis
           thaliana]; similar to cytochrome P450LXXIA1, Persea
           americana, M32885
          Length = 490

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 374 GVMVPFVYELDSLLGEDHSKLDGEVRFDDFL 282
           G  +P +  +D + G+DH   + + RFD+FL
Sbjct: 221 GEYIPSLSWIDKIRGQDHKMEEVDKRFDEFL 251


>At5g09400.1 68418.m01089 potassium transporter family protein
           similar to K+ transporter HAK5 [Arabidopsis thaliana]
           GI:7108597; contains Pfam profile PF02705: K+ potassium
           transporter; KUP/HAK/KT Transporter family member,
           PMID:11500563; Note: possible sequencing error causes a
           frameshift in the 4th exon|15810448|gb|AY056263
          Length = 858

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = -1

Query: 215 FTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKA 36
           F +S+  S F+   +  ++A  ++   MTT  +SC    S+ LG    L+   HT+R   
Sbjct: 411 FFSSVPGSAFWPVLFIANIAALIASRTMTTATFSC-IKQSTALGCFPRLKI-IHTSRKFM 468

Query: 35  NKVSLILAQW 6
            ++ + +  W
Sbjct: 469 GQIYIPVLNW 478


>At1g56660.1 68414.m06516 expressed protein
          Length = 522

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +3

Query: 177 EGKEGRGYQGSREXSDRKRQEEHHGLAYQLWTKDGKE 287
           +GK+ +G +G  E  D ++++EH     ++  KD K+
Sbjct: 213 KGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKK 249


>At1g53910.1 68414.m06137 AP2 domain-containing protein RAP2.12
           (RAP2.12) identical to AP2 domain containing protein
           GI:2281649 from [Arabidopsis thaliana]
          Length = 358

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 180 GKEGRGYQGSREXS-DRKRQEEHHGLAYQLWTKDGKEI 290
           GK+  G  G  E S +RKR+ ++ G+  + W K   EI
Sbjct: 103 GKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEI 140


>At5g51650.1 68418.m06404 hypothetical protein 
          Length = 206

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +3

Query: 171 ISEGKEGRGYQGSREXSDRKRQEEHHGLAYQLWTKDGKEIVKSYFPI 311
           + E KEG   QG  E  ++   E+    A+  W KDG   V   + I
Sbjct: 38  VQERKEGLEAQGKEEGVEKVLVEKEKEEAHVSWEKDGSVSVAYTYAI 84


>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 76  TLAPRTDDVLAEQLYMSVVIGEYETAIAKCSEYLKE 183
           ++A + DDV       SV + E   AI K SEY+ +
Sbjct: 202 SVASKNDDVQLADFIESVFLNEQVEAIKKISEYVSQ 237


>At1g80900.1 68414.m09492 magnesium transporter CorA-like family
           protein (MGT1) (MRS2) low similarity to SP|Q01926 RNA
           splicing protein MRS2, mitochondrial precursor
           {Saccharomyces cerevisiae}; contains Pfam profile
           PF01544: CorA-like Mg2+ transporter protein
          Length = 443

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 312 QFRVIFTEQTVKLINKRDHHALKLIDQQKPPTKLHSVT 425
           Q R I T   V L+N  D++ L+ + + +   K  SVT
Sbjct: 109 QIRCIITADEVLLLNSLDNYVLRYVVELQQRLKASSVT 146


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,870,082
Number of Sequences: 28952
Number of extensions: 195988
Number of successful extensions: 622
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)