Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30409
         (372 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   3.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   3.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   3.1  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    20   7.1  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   7.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   9.4  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 195 YSFQFLCLKLKRGRR 239
           Y+F+ LC KLKR  R
Sbjct: 243 YNFERLCNKLKRATR 257


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 364 INLNNYNMTTVSTHENI 314
           IN  NYN     THEN+
Sbjct: 98  INHQNYNEPYQRTHENM 114


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 364 INLNNYNMTTVSTHENI 314
           IN  NYN     THEN+
Sbjct: 98  INHQNYNEPYQRTHENM 114


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 364 INLNNYNMTTVSTHENI 314
           IN  NYN     THEN+
Sbjct: 98  INHQNYNEPYQRTHENM 114


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 294 NYKKTQRFSS*N*FKDGF 241
           NY+  Q +S+ N +++GF
Sbjct: 214 NYQYNQAYSNYNNYQEGF 231


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 294 NYKKTQRFSS*N*FKDGF 241
           NY+  Q +S+ N +++GF
Sbjct: 234 NYQYNQAYSNYNNYQEGF 251


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 181 GVYSNRYFYVTTILAFFREREKRS*VL 101
           G Y+++  YVT I    +E +K   +L
Sbjct: 149 GAYNDKSNYVTLIKEMRKEFDKNGLIL 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,346
Number of Sequences: 336
Number of extensions: 1302
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)