BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS30408 (332 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9Y266 Cluster: Nuclear migration protein nudC; n=33; E... 75 4e-13 UniRef50_UPI00015B57DF Cluster: PREDICTED: similar to nuclear mi... 73 1e-12 UniRef50_UPI0000D563DC Cluster: PREDICTED: similar to Nuclear mi... 72 3e-12 UniRef50_Q6IRP6 Cluster: MGC83068 protein; n=3; Bilateria|Rep: M... 69 2e-11 UniRef50_Q9VVA6 Cluster: CG9710-PA; n=7; Fungi/Metazoa group|Rep... 68 4e-11 UniRef50_UPI0000587C91 Cluster: PREDICTED: hypothetical protein,... 66 2e-10 UniRef50_O45549 Cluster: NUD-1; n=2; Caenorhabditis|Rep: NUD-1 -... 56 2e-07 UniRef50_Q4QFT9 Cluster: Putative uncharacterized protein; n=6; ... 52 2e-06 UniRef50_Q5CXZ0 Cluster: NudC ortholog; n=2; Cryptosporidium|Rep... 48 4e-05 UniRef50_Q4N8F2 Cluster: Putative uncharacterized protein; n=2; ... 44 7e-04 UniRef50_Q4UH66 Cluster: Putative uncharacterized protein; n=1; ... 40 0.011 UniRef50_A0BGR6 Cluster: Chromosome undetermined scaffold_106, w... 36 0.18 UniRef50_Q8IVD9 Cluster: NudC domain-containing protein 3; n=25;... 36 0.18 UniRef50_A7AMN3 Cluster: Nuclear movement family protein; n=1; B... 36 0.24 UniRef50_Q5DCU5 Cluster: SJCHGC02543 protein; n=1; Schistosoma j... 35 0.41 UniRef50_Q5DAE2 Cluster: SJCHGC02542 protein; n=1; Schistosoma j... 35 0.41 UniRef50_Q8IDW4 Cluster: Nuclear movement protein, putative; n=7... 33 0.96 UniRef50_Q6NZR9 Cluster: Zgc:77067; n=3; Clupeocephala|Rep: Zgc:... 33 1.3 UniRef50_Q23GD3 Cluster: Nuclear movement protein; n=3; Alveolat... 31 3.9 UniRef50_Q7RBZ0 Cluster: Nuclear distribution gene C homolog, pu... 30 8.9 >UniRef50_Q9Y266 Cluster: Nuclear migration protein nudC; n=33; Eumetazoa|Rep: Nuclear migration protein nudC - Homo sapiens (Human) Length = 331 Score = 74.5 bits (175), Expect = 4e-13 Identities = 34/48 (70%), Positives = 39/48 (81%) Frame = +3 Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254 + ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+ Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53 >UniRef50_UPI00015B57DF Cluster: PREDICTED: similar to nuclear migration protein nudC; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to nuclear migration protein nudC - Nasonia vitripennis Length = 337 Score = 73.3 bits (172), Expect = 1e-12 Identities = 33/51 (64%), Positives = 41/51 (80%) Frame = +3 Query: 102 MANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254 M D +FD +LL+MAQQHEGGV+DLL TI SFL+RKTDF+TGG +G E+ Sbjct: 1 MTMDEGKFDGLLLSMAQQHEGGVQDLLETIFSFLARKTDFYTGGGDGAAEK 51 >UniRef50_UPI0000D563DC Cluster: PREDICTED: similar to Nuclear migration protein nudC (Nuclear distribution protein C homolog) (Silica-induced gene 92 protein) (SIG-92); n=1; Tribolium castaneum|Rep: PREDICTED: similar to Nuclear migration protein nudC (Nuclear distribution protein C homolog) (Silica-induced gene 92 protein) (SIG-92) - Tribolium castaneum Length = 316 Score = 71.7 bits (168), Expect = 3e-12 Identities = 31/49 (63%), Positives = 37/49 (75%) Frame = +3 Query: 108 NDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254 N E+FDS+ L++AQ H G LL+T VSFLSRKTDFFTGG EG WE+ Sbjct: 6 NQTEQFDSLFLSIAQHHPHGASQLLDTFVSFLSRKTDFFTGGEEGAWEK 54 >UniRef50_Q6IRP6 Cluster: MGC83068 protein; n=3; Bilateria|Rep: MGC83068 protein - Xenopus laevis (African clawed frog) Length = 329 Score = 69.3 bits (162), Expect = 2e-11 Identities = 31/48 (64%), Positives = 37/48 (77%) Frame = +3 Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254 + ERFD MLL+MAQQHEGGV++L+NT SFL RKTDFF G G E+ Sbjct: 6 EDERFDGMLLSMAQQHEGGVQELINTFFSFLRRKTDFFVGAEGGAAEK 53 >UniRef50_Q9VVA6 Cluster: CG9710-PA; n=7; Fungi/Metazoa group|Rep: CG9710-PA - Drosophila melanogaster (Fruit fly) Length = 332 Score = 68.1 bits (159), Expect = 4e-11 Identities = 28/51 (54%), Positives = 40/51 (78%) Frame = +3 Query: 102 MANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254 MA + +FD++LLA+A++H GGV + L T+ SFL RKTDFFTG ++ EWE+ Sbjct: 1 MAAEEGKFDNILLAVAEKHHGGVPEFLGTLASFLRRKTDFFTGAKQTEWEK 51 >UniRef50_UPI0000587C91 Cluster: PREDICTED: hypothetical protein, partial; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: hypothetical protein, partial - Strongylocentrotus purpuratus Length = 155 Score = 65.7 bits (153), Expect = 2e-10 Identities = 29/51 (56%), Positives = 36/51 (70%) Frame = +3 Query: 102 MANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254 MA D +RFD ML+AMAQQ E G+ L+N FL RKTDFF G ++GE E+ Sbjct: 1 MAEDDDRFDGMLMAMAQQQEQGIHQLINNFFGFLRRKTDFFAGAQKGEAEK 51 >UniRef50_O45549 Cluster: NUD-1; n=2; Caenorhabditis|Rep: NUD-1 - Caenorhabditis elegans Length = 320 Score = 55.6 bits (128), Expect = 2e-07 Identities = 24/38 (63%), Positives = 32/38 (84%) Frame = +3 Query: 117 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTG 230 ERFDS+LL+MAQQ GGV ++L+ + FLSRKTDF++G Sbjct: 5 ERFDSVLLSMAQQLSGGVPEMLDVLFEFLSRKTDFYSG 42 >UniRef50_Q4QFT9 Cluster: Putative uncharacterized protein; n=6; Trypanosomatidae|Rep: Putative uncharacterized protein - Leishmania major Length = 328 Score = 52.4 bits (120), Expect = 2e-06 Identities = 25/37 (67%), Positives = 31/37 (83%) Frame = +3 Query: 117 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFT 227 ERFDSMLLA+AQQ +G + +L+T SFL+RKTDFFT Sbjct: 4 ERFDSMLLAIAQQQQG-IDGILDTFFSFLNRKTDFFT 39 >UniRef50_Q5CXZ0 Cluster: NudC ortholog; n=2; Cryptosporidium|Rep: NudC ortholog - Cryptosporidium parvum Iowa II Length = 312 Score = 48.0 bits (109), Expect = 4e-05 Identities = 23/46 (50%), Positives = 32/46 (69%) Frame = +3 Query: 117 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254 ERFDS+L+ +AQ G+++ L+ I FL RKTDFFT +GE E+ Sbjct: 8 ERFDSLLINLAQS-ANGIENFLDVIFGFLLRKTDFFTAMNQGEEEK 52 >UniRef50_Q4N8F2 Cluster: Putative uncharacterized protein; n=2; Theileria|Rep: Putative uncharacterized protein - Theileria parva Length = 535 Score = 44.0 bits (99), Expect = 7e-04 Identities = 23/51 (45%), Positives = 33/51 (64%) Frame = +3 Query: 72 VTYRLNTKVNMANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF 224 V YR K+ M+ + E D++LL + Q+ GGV+ LL SFL+RKTDF+ Sbjct: 118 VLYR-RCKIEMSENNEGVDNLLLLLTQR-SGGVEKLLENFFSFLARKTDFY 166 >UniRef50_Q4UH66 Cluster: Putative uncharacterized protein; n=1; Theileria annulata|Rep: Putative uncharacterized protein - Theileria annulata Length = 379 Score = 39.9 bits (89), Expect = 0.011 Identities = 19/41 (46%), Positives = 28/41 (68%) Frame = +3 Query: 102 MANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF 224 M+ + E D++LL + Q+ GGV+ LL SFL+RKTDF+ Sbjct: 1 MSENTEGVDNLLLLLTQR-SGGVEKLLENFFSFLARKTDFY 40 >UniRef50_A0BGR6 Cluster: Chromosome undetermined scaffold_106, whole genome shotgun sequence; n=2; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_106, whole genome shotgun sequence - Paramecium tetraurelia Length = 329 Score = 35.9 bits (79), Expect = 0.18 Identities = 15/36 (41%), Positives = 26/36 (72%) Frame = +3 Query: 117 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF 224 +RFD +A++ GG++ LLN++ SFL R+TD++ Sbjct: 3 DRFDEHFFLIAKE-TGGIEGLLNSLFSFLLRRTDYY 37 >UniRef50_Q8IVD9 Cluster: NudC domain-containing protein 3; n=25; Euteleostomi|Rep: NudC domain-containing protein 3 - Homo sapiens (Human) Length = 361 Score = 35.9 bits (79), Expect = 0.18 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +3 Query: 117 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF 224 E +D LL + Q H G V+D L + FL RKTDF+ Sbjct: 7 ELYDQALLGILQ-HVGNVQDFLRVLFGFLYRKTDFY 41 >UniRef50_A7AMN3 Cluster: Nuclear movement family protein; n=1; Babesia bovis|Rep: Nuclear movement family protein - Babesia bovis Length = 309 Score = 35.5 bits (78), Expect = 0.24 Identities = 15/40 (37%), Positives = 26/40 (65%) Frame = +3 Query: 135 LLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254 ++ M +H G++DLL+T+ FL R++DFF G + + Q Sbjct: 11 IMFMLIEHCKGIEDLLDTVFEFLGRRSDFFDYGVDDDPNQ 50 >UniRef50_Q5DCU5 Cluster: SJCHGC02543 protein; n=1; Schistosoma japonicum|Rep: SJCHGC02543 protein - Schistosoma japonicum (Blood fluke) Length = 179 Score = 34.7 bits (76), Expect = 0.41 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = +3 Query: 102 MANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF 224 M N ++D+ LL + Q +EG ++ L+ I FL R+TDFF Sbjct: 1 MTNMDTQYDNALLGILQ-NEGKLEKFLDVIFGFLMRRTDFF 40 >UniRef50_Q5DAE2 Cluster: SJCHGC02542 protein; n=1; Schistosoma japonicum|Rep: SJCHGC02542 protein - Schistosoma japonicum (Blood fluke) Length = 334 Score = 34.7 bits (76), Expect = 0.41 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = +3 Query: 102 MANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF 224 M N ++D+ LL + Q +EG ++ L+ I FL R+TDFF Sbjct: 1 MTNMDTQYDNALLGILQ-NEGKLEKFLDVIFGFLMRRTDFF 40 >UniRef50_Q8IDW4 Cluster: Nuclear movement protein, putative; n=7; Eukaryota|Rep: Nuclear movement protein, putative - Plasmodium falciparum (isolate 3D7) Length = 386 Score = 33.5 bits (73), Expect = 0.96 Identities = 16/37 (43%), Positives = 25/37 (67%) Frame = +3 Query: 117 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFT 227 E+FD ++L +A++ G + +L+ SFL RKTDF T Sbjct: 9 EKFDFLMLNIAKEC-GDINNLMEHFFSFLLRKTDFIT 44 >UniRef50_Q6NZR9 Cluster: Zgc:77067; n=3; Clupeocephala|Rep: Zgc:77067 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 344 Score = 33.1 bits (72), Expect = 1.3 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +3 Query: 117 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF 224 E +D+ LL + Q H G V++ L FL RKTDF+ Sbjct: 9 ELYDNALLGILQ-HVGNVQNFLQVYFGFLYRKTDFY 43 >UniRef50_Q23GD3 Cluster: Nuclear movement protein; n=3; Alveolata|Rep: Nuclear movement protein - Tetrahymena thermophila SB210 Length = 1380 Score = 31.5 bits (68), Expect = 3.9 Identities = 13/35 (37%), Positives = 24/35 (68%) Frame = +3 Query: 120 RFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF 224 RFD + ++ GG++ +L+++ +FL R+TDFF Sbjct: 1023 RFDDYYFTICKE-TGGIEGVLHSMFNFLFRRTDFF 1056 >UniRef50_Q7RBZ0 Cluster: Nuclear distribution gene C homolog, putative; n=5; Plasmodium|Rep: Nuclear distribution gene C homolog, putative - Plasmodium yoelii yoelii Length = 322 Score = 30.3 bits (65), Expect = 8.9 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +3 Query: 102 MANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF 224 M ND + ++ML+ +A+ + + DL++ +SFL KTD+F Sbjct: 1 MEND--KHENMLMHIARDFKS-IDDLVDVFLSFLENKTDYF 38 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 260,381,800 Number of Sequences: 1657284 Number of extensions: 4065287 Number of successful extensions: 9749 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 9575 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9744 length of database: 575,637,011 effective HSP length: 86 effective length of database: 433,110,587 effective search space used: 10394654088 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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