Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30408
(332 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC021139-1|AAH21139.1| 331|Homo sapiens nuclear distribution ge... 75 7e-14
BC015153-1|AAH15153.1| 331|Homo sapiens nuclear distribution ge... 75 7e-14
BC007280-1|AAH07280.1| 331|Homo sapiens nuclear distribution ge... 75 7e-14
BC006147-1|AAH06147.1| 331|Homo sapiens nuclear distribution ge... 75 7e-14
BC003132-1|AAH03132.1| 331|Homo sapiens nuclear distribution ge... 75 7e-14
BC002399-1|AAH02399.1| 331|Homo sapiens nuclear distribution ge... 75 7e-14
AL356390-7|CAI13561.1| 331|Homo sapiens nuclear distribution ge... 75 7e-14
AF130736-1|AAD30517.1| 331|Homo sapiens nuclear distribution pr... 75 7e-14
AF125465-1|AAD39921.1| 331|Homo sapiens nuclear distribution pr... 75 7e-14
AF100760-1|AAD43024.1| 331|Homo sapiens MNUDC protein protein. 75 7e-14
AF086922-1|AAP97152.1| 331|Homo sapiens SIG-92 protein. 75 7e-14
AB019408-1|BAA76628.1| 158|Homo sapiens protein ( Homo sapiens ... 73 3e-13
AL356390-9|CAI13563.1| 209|Homo sapiens nuclear distribution ge... 38 0.007
BC035014-1|AAH35014.1| 361|Homo sapiens NudC domain containing ... 36 0.030
AB028991-1|BAA83020.1| 354|Homo sapiens KIAA1068 protein protein. 35 0.069
>BC021139-1|AAH21139.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>BC015153-1|AAH15153.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>BC007280-1|AAH07280.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>BC006147-1|AAH06147.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>BC003132-1|AAH03132.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>BC002399-1|AAH02399.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>AL356390-7|CAI13561.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>AF130736-1|AAD30517.1| 331|Homo sapiens nuclear distribution
protein C homolog protein.
Length = 331
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>AF125465-1|AAD39921.1| 331|Homo sapiens nuclear distribution
protein protein.
Length = 331
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>AF100760-1|AAD43024.1| 331|Homo sapiens MNUDC protein protein.
Length = 331
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>AF086922-1|AAP97152.1| 331|Homo sapiens SIG-92 protein.
Length = 331
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>AB019408-1|BAA76628.1| 158|Homo sapiens protein ( Homo sapiens
mRNA, expressed in fibroblasts of periodontal ligament,
complete cds, clone:PDL-48. ).
Length = 158
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +3
Query: 111 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
+ ERFD MLLAMA QHEGGV++L+NT SFL RKTDFF GG EG E+
Sbjct: 6 EEERFDGMLLAMAHQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEK 53
>AL356390-9|CAI13563.1| 209|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 209
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 177 LLNTIVSFLSRKTDFFTGGREGEWEQ 254
L+NT SFL RKTDFF GG EG E+
Sbjct: 32 LVNTFFSFLRRKTDFFIGGEEGMAEK 57
>BC035014-1|AAH35014.1| 361|Homo sapiens NudC domain containing 3
protein.
Length = 361
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 117 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF 224
E +D LL + Q H G V+D L + FL RKTDF+
Sbjct: 7 ELYDQALLGILQ-HVGNVQDFLRVLFGFLYRKTDFY 41
>AB028991-1|BAA83020.1| 354|Homo sapiens KIAA1068 protein protein.
Length = 354
Score = 34.7 bits (76), Expect = 0.069
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 123 FDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF 224
+D LL + Q H G V+D L + FL RKTDF+
Sbjct: 2 YDQALLGILQ-HVGNVQDFLRVLFGFLYRKTDFY 34
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,707,166
Number of Sequences: 237096
Number of extensions: 611956
Number of successful extensions: 1181
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -