Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30408
         (332 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY328470-1|AAP93640.1|  332|Drosophila melanogaster nuclear migr...    68   3e-12
AY071485-1|AAL49107.1|  332|Drosophila melanogaster RE55422p pro...    68   3e-12
AE014296-2806|AAF49407.2|  332|Drosophila melanogaster CG9710-PA...    68   3e-12
BT014657-1|AAT27281.1|  476|Drosophila melanogaster LD13721p pro...    29   1.9  
AY069672-1|AAL39817.1|  360|Drosophila melanogaster LD44769p pro...    29   1.9  
AF149797-1|AAF03220.2|  450|Drosophila melanogaster Drep4 protein.     29   1.9  
AE014297-1924|AAF55118.1|  868|Drosophila melanogaster CG3837-PA...    29   1.9  
AE014134-2322|AAF53276.1|  450|Drosophila melanogaster CG9414-PA...    29   1.9  
AB036773-1|BAA97120.1|  450|Drosophila melanogaster Caspase-acti...    29   1.9  

>AY328470-1|AAP93640.1|  332|Drosophila melanogaster nuclear
           migration protein NudC protein.
          Length = 332

 Score = 68.1 bits (159), Expect = 3e-12
 Identities = 28/51 (54%), Positives = 40/51 (78%)
 Frame = +3

Query: 102 MANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
           MA +  +FD++LLA+A++H GGV + L T+ SFL RKTDFFTG ++ EWE+
Sbjct: 1   MAAEEGKFDNILLAVAEKHHGGVPEFLGTLASFLRRKTDFFTGAKQTEWEK 51


>AY071485-1|AAL49107.1|  332|Drosophila melanogaster RE55422p
           protein.
          Length = 332

 Score = 68.1 bits (159), Expect = 3e-12
 Identities = 28/51 (54%), Positives = 40/51 (78%)
 Frame = +3

Query: 102 MANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
           MA +  +FD++LLA+A++H GGV + L T+ SFL RKTDFFTG ++ EWE+
Sbjct: 1   MAAEEGKFDNILLAVAEKHHGGVPEFLGTLASFLRRKTDFFTGAKQTEWEK 51


>AE014296-2806|AAF49407.2|  332|Drosophila melanogaster CG9710-PA
           protein.
          Length = 332

 Score = 68.1 bits (159), Expect = 3e-12
 Identities = 28/51 (54%), Positives = 40/51 (78%)
 Frame = +3

Query: 102 MANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQ 254
           MA +  +FD++LLA+A++H GGV + L T+ SFL RKTDFFTG ++ EWE+
Sbjct: 1   MAAEEGKFDNILLAVAEKHHGGVPEFLGTLASFLRRKTDFFTGAKQTEWEK 51


>BT014657-1|AAT27281.1|  476|Drosophila melanogaster LD13721p
           protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 218 LFHWWP*RGMGAVVKDTFYTHAK 286
           L HWWP R    V+K+ F T  K
Sbjct: 226 LLHWWPPRRPNGVIKNYFVTAEK 248


>AY069672-1|AAL39817.1|  360|Drosophila melanogaster LD44769p
           protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 218 LFHWWP*RGMGAVVKDTFYTHAK 286
           L HWWP R    V+K+ F T  K
Sbjct: 110 LLHWWPPRRPNGVIKNYFVTAEK 132


>AF149797-1|AAF03220.2|  450|Drosophila melanogaster Drep4 protein.
          Length = 450

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 114 PERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGRE 239
           PE+F  M+     Q +  V D   T +S  +   ++FTGG E
Sbjct: 151 PEKFRRMITEYEHQKQRRVLDNSKTHLSLKAEHVEWFTGGEE 192


>AE014297-1924|AAF55118.1|  868|Drosophila melanogaster CG3837-PA
           protein.
          Length = 868

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 218 LFHWWP*RGMGAVVKDTFYTHAK 286
           L HWWP R    V+K+ F T  K
Sbjct: 618 LLHWWPPRRPNGVIKNYFVTAEK 640


>AE014134-2322|AAF53276.1|  450|Drosophila melanogaster CG9414-PA
           protein.
          Length = 450

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 114 PERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGRE 239
           PE+F  M+     Q +  V D   T +S  +   ++FTGG E
Sbjct: 151 PEKFRRMITEYEHQKQRRVLDNSKTHLSLKAEHVEWFTGGEE 192


>AB036773-1|BAA97120.1|  450|Drosophila melanogaster
           Caspase-activated DNase protein.
          Length = 450

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 114 PERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGRE 239
           PE+F  M+     Q +  V D   T +S  +   ++FTGG E
Sbjct: 151 PEKFRRMITEYEHQKQRRVLDNSKTHLSLKAEHVEWFTGGEE 192


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,821,149
Number of Sequences: 53049
Number of extensions: 188494
Number of successful extensions: 425
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)