Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30407
         (348 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...   105   1e-25
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    98   3e-23
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   0.68 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   0.68 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   0.68 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   1.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   2.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   2.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   3.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   4.8  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            20   6.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   6.3  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score =  105 bits (252), Expect = 1e-25
 Identities = 50/86 (58%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2   KPGNNTXXXXXXXXXXTVPFERTFSN-QADRPGNPGSPESAEFDFCGCGWPQHMLIPKGT 178
           K G NT          T+PFERTF N  A+RP   G    +EF+FCGCGWPQHML+PKGT
Sbjct: 534 KQGTNTITRHSTESSLTIPFERTFRNLDANRP--TGGDALSEFNFCGCGWPQHMLLPKGT 591

Query: 179 TQGYPMVLFVMVSNWNDDRVEQDLVG 256
             GYP  LFVM+SN+ DDRVEQD  G
Sbjct: 592 EAGYPCHLFVMISNYADDRVEQDTSG 617



 Score = 46.8 bits (106), Expect = 6e-08
 Identities = 16/29 (55%), Positives = 24/29 (82%)
 Frame = +1

Query: 253 GSCNDAASYCGIRDRKXPDRRAMGFPFXR 339
           G+C+D  ++CGI+D+  PDRR+MG+PF R
Sbjct: 617 GTCSDGDTFCGIKDKLYPDRRSMGYPFDR 645


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 97.9 bits (233), Expect = 3e-23
 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2   KPGNNTXXXXXXXXXXTVPFERTFSN-QADRPGNPGSPESAEFDFCGCGWPQHMLIPKGT 178
           K G NT          T+PFERTF N   +RP   G  E A+F+FCGCGWPQHMLIPKGT
Sbjct: 535 KQGQNTITRASSQSSVTIPFERTFRNLDLNRP--QGGEELAQFNFCGCGWPQHMLIPKGT 592

Query: 179 TQGYPMVLFVMVSNWNDDRVEQDLVG 256
            +G    LFVM+SN++DD+++Q   G
Sbjct: 593 PEGMKSQLFVMISNYDDDKIDQSTEG 618



 Score = 52.8 bits (121), Expect = 1e-09
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = +1

Query: 253 GSCNDAASYCGIRDRKXPDRRAMGFPFXR 339
           G CNDA SYCGI+D+  PDRR+MG+PF R
Sbjct: 618 GVCNDAGSYCGIKDKLYPDRRSMGYPFDR 646


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 0.68
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +3

Query: 132 SAAAGGLSTCSYPREPLKDILWCCSSWCPTGTMTG 236
           S   G +  CS    P  DI+W  S     G + G
Sbjct: 36  SNTTGAVVECSAHGNPTPDIIWVRSDGTAVGDVPG 70



 Score = 21.4 bits (43), Expect = 2.7
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 295  GRGCRSTTPRHCTTHQ 248
            G G R TTP HC T Q
Sbjct: 1184 GDGVR-TTPIHCQTEQ 1198



 Score = 20.6 bits (41), Expect = 4.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 156 TCSYPREPLKDILW 197
           TC++   P+K I W
Sbjct: 348 TCNFEGNPIKTISW 361


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.68
 Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
 Frame = -3

Query: 346 ARAXRTGSPWRAGPGTCGRGCR-STTPRHCTTHQVL 242
           A A    +P  + P  C R CR    PR C  H  L
Sbjct: 92  ATAELLKNPSLSSPDECARACREGEPPRICYYHFTL 127


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 0.68
 Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
 Frame = -3

Query: 346 ARAXRTGSPWRAGPGTCGRGCR-STTPRHCTTHQVL 242
           A A    +P  + P  C R CR    PR C  H  L
Sbjct: 92  ATAELLKNPSLSSPDECARACREGEPPRICYYHFTL 127


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 141 QPQKSNSADSGDPGLPGLSAWLLNVLSNGTVT 46
           +PQ  +   +G  GLP  +   L   SNG VT
Sbjct: 31  EPQLHSPCATGSNGLPAGAGSNLLCASNGLVT 62


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 105 DLPSLPSLTSAAAG-GLSTCSYPREPL 182
           DL SL  +T      GL +CS+P++ L
Sbjct: 11  DLNSLKCITKVLTILGLLSCSFPKKKL 37


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 105 DLPSLPSLTSAAAG-GLSTCSYPREPL 182
           DL SL  +T      GL +CS+P++ L
Sbjct: 7   DLNSLKCITKVLTILGLLSCSFPKKKL 33


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 288 PRPQVPGPARHGLPV 332
           P P VPG   HGLPV
Sbjct: 38  PYP-VPGLGLHGLPV 51


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 120 PSLTSAAAGGLSTCSYP 170
           PSL+S   GGLS    P
Sbjct: 81  PSLSSGLGGGLSGMPMP 97


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 238 HPVIVPVGHHDE 203
           HP+ +P GH D+
Sbjct: 5   HPLRMPTGHLDD 16


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 238 HPVIVPVGHHDE 203
           HP+ +P GH D+
Sbjct: 5   HPLRMPTGHLDD 16


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,035
Number of Sequences: 336
Number of extensions: 2024
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)