Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30407
(348 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0201 + 15543318-15543488,15543956-15544069 29 0.76
12_01_0670 + 5698852-5699061,5700894-5701316 28 1.8
03_01_0353 + 2782125-2782550 28 1.8
03_01_0080 - 640806-641146,642484-642700,642795-642952,644057-64... 28 1.8
02_05_0551 + 29907768-29907909,29907995-29909280 28 2.3
02_02_0372 + 9522751-9522964,9523043-9523255,9523471-9523555,952... 28 2.3
08_02_0669 + 19868149-19870179 27 3.1
03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 27 3.1
03_02_0796 - 11251958-11251971,11252220-11252301,11252420-112525... 27 3.1
01_01_0821 + 6399890-6400397,6400474-6401066 27 4.0
06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027 27 5.3
03_05_0292 + 22846273-22846377,22847161-22847823 27 5.3
02_04_0090 - 19643182-19643322,19644192-19644335,19644563-196446... 27 5.3
01_05_0082 - 17972276-17973268 27 5.3
12_02_0859 - 23751198-23753258 26 7.1
12_02_0197 + 15392427-15392617,15392743-15393271 26 7.1
10_08_0928 + 21617977-21618157,21618260-21618378,21618653-216187... 26 7.1
10_08_0332 - 16843295-16843356,16843884-16846656 26 7.1
04_03_0819 + 20018496-20019487,20019587-20019721,20019834-200199... 26 7.1
04_03_0181 - 12327281-12328620,12330922-12331015,12331079-123311... 26 7.1
03_02_0341 - 7643426-7643973,7644340-7644505 26 7.1
02_05_0490 + 29456825-29457499,29458771-29459057,29460922-294610... 26 7.1
02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246 26 7.1
02_02_0357 + 9360108-9360754,9363732-9364137 26 7.1
02_02_0355 + 9312814-9313650 26 7.1
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 26 9.3
12_01_0294 + 2230539-2230870,2232179-2232574,2232676-2232834,223... 26 9.3
12_01_0008 + 63393-64004 26 9.3
11_06_0269 - 21800104-21800655,21800824-21801370,21801398-21801513 26 9.3
11_01_0009 + 67344-67955 26 9.3
10_08_0744 + 20257486-20257700,20258217-20258385 26 9.3
09_02_0495 + 9880714-9881196 26 9.3
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 26 9.3
05_05_0302 - 23944802-23945857 26 9.3
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 26 9.3
>09_04_0201 + 15543318-15543488,15543956-15544069
Length = 94
Score = 29.5 bits (63), Expect = 0.76
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = -1
Query: 144 PQPQKSNSADSGDPGLPGLSAWLL--NVLSNG----TVTEESTLRR 25
P+PQ S+SA GLPG+S LL + G V EE TLRR
Sbjct: 9 PRPQGSSSAVPRPRGLPGVSVLLLPDKAMDAGEDMPPVAEEPTLRR 54
>12_01_0670 + 5698852-5699061,5700894-5701316
Length = 210
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3
Query: 69 HSATRLTGQVIRDLPSLPSLTSAAAG 146
HSA RL G+ R LPS +SAAAG
Sbjct: 33 HSANRLAGKHTRVALLLPSSSSAAAG 58
>03_01_0353 + 2782125-2782550
Length = 141
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -3
Query: 223 PVGHHDEQHHRISLSGSLGYEHVLRPPAAAEVKLGRLGRSRITWPVSLVAEC 68
P HH R++ +GS PPA + GR G R T V L EC
Sbjct: 72 PGDHHHGAASRMTSTGSSSSSFTTPPPANSSAAAGRGGSDRTTDKVEL--EC 121
>03_01_0080 -
640806-641146,642484-642700,642795-642952,644057-645062
Length = 573
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 177 PLKDILWCCSSWCPTGTMTGWSKTWWVVQ*RGVVLRHPRPQVPGPARHGLPV 332
P +LWC WC ++ + WWV +G+V P P H +P+
Sbjct: 151 PQYKLLWC---WCSDYALSHQGRLWWVDLLQGLVACDPFSD--NPELHFVPL 197
>02_05_0551 + 29907768-29907909,29907995-29909280
Length = 475
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 87 TGQVIRDLP--SLPSLTSAAAGGLSTCSYPREPLKDILWCCSSWCPTGTMT 233
TG V+ LP + +L SA ++ YP P IL C + GT+T
Sbjct: 360 TGTVVTRLPPTAYSALRSAFRAAMAPYGYPSAPATGILDTCYDFTRYGTVT 410
>02_02_0372 +
9522751-9522964,9523043-9523255,9523471-9523555,
9524373-9524448,9524974-9525150,9525473-9525566,
9526357-9526466,9526568-9526657,9526752-9526832,
9528468-9529277,9530777-9530896
Length = 689
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +3
Query: 60 LRGHSATRLTGQVIRDLPSLPSLTSAAAGGLSTCSYPREPLKDILWCCS 206
LRG SA L IR +P +L+ A G C+ PR +L CCS
Sbjct: 362 LRGRSAQLLI-DYIRTIPCKAALSVA---GCYLCAVPRSKGTKVLVCCS 406
>08_02_0669 + 19868149-19870179
Length = 676
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 105 DLPSLPSLTSAAAGGLSTCSYPREPLKDILWCCSSWCPTGTMTGWSK 245
D+ LP+L + RE L+++ W ++ P G++ G S+
Sbjct: 31 DVDRLPALRGGVGVAVRVAGLLREFLEEVRWAAAAELPGGSVLGMSE 77
>03_05_0491 -
24868261-24869383,24869482-24869561,24870193-24870249,
24870567-24870660,24871013-24871099,24871188-24871347,
24871440-24871674
Length = 611
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 205 EQHHRISLSGSLGYEHVLRPPAAAEV 128
EQ ++I+L YE + RPP AAE+
Sbjct: 428 EQIYKITLPKPKAYEQLSRPPTAAEL 453
>03_02_0796 -
11251958-11251971,11252220-11252301,11252420-11252500,
11252892-11253004,11253081-11253177,11253525-11253839,
11253936-11253984,11254148-11254641,11254772-11254836,
11255074-11255239,11257016-11257654
Length = 704
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 150 GHPQPQKSNSADSGDPGLPGLSAWLLNVLSNGTVTEE 40
G P P+K A + L GL AW+ V S TEE
Sbjct: 106 GLPAPEKDPVATACQHELEGLKAWVETVRSRKESTEE 142
>01_01_0821 + 6399890-6400397,6400474-6401066
Length = 366
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 138 AAGGLSTCSYPREPLKDILW--CCSSWCPTGTMTG 236
A GGL + P P+ W CC W +G +TG
Sbjct: 128 ATGGLLHAAPPPCPIPPDSWLPCCVDWRSSGAVTG 162
>06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027
Length = 178
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 331 TGSPWRAGPGTCGRGCRSTTPRHCTTHQVLLHPVIVPVGHHDEQHHR 191
T S WR G G+ R ST R T L+ ++ + +H +HR
Sbjct: 83 TASRWRDGRGSVRR---STATRKMATFAALVSINVIIIKYHSRINHR 126
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 169 QGNHSRISYGAVRHGVQLER*PGGARPGGSCNDAASYCGIRDRKXPDRR 315
+G+ +R GA G + R GGAR GG + + G R+ PD R
Sbjct: 62 RGDGARDGGGARGGGGRGARGGGGARGGGGRHGGEAATGAEARRLPDVR 110
>02_04_0090 -
19643182-19643322,19644192-19644335,19644563-19644626,
19644710-19644796,19645371-19645513,19645706-19645771,
19645954-19646046,19646165-19646230,19646363-19646433,
19646882-19646982,19647217-19647317,19647421-19647528,
19647639-19648064
Length = 536
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +1
Query: 154 AHAHTQGNHSRISYGAVRHGVQLE----R*PGGARPGGSCNDAASYCGIRDR 297
AH H G H RH V+ + PG ARPGG+ G+RDR
Sbjct: 48 AHHH-HGRHPHPPSPRWRHDVRARAGTIQAPGLARPGGAVETDRLPSGVRDR 98
>01_05_0082 - 17972276-17973268
Length = 330
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 283 RSTTPRHCT-THQVLLHPVIVPVGHHDEQHHRISLS 179
R+ +P + TH+ V+V VG HD+ HH +LS
Sbjct: 180 RAASPSSSSPTHETEPEAVVV-VGDHDDDHHHPALS 214
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -3
Query: 226 VPVGHHDEQHHRISLSGSLGYEHVL----RPPAAAEVKLGRLGRSRITWPVSLVAECP 65
VPV H + + + L +LG++ ++ R P++AE + G S + + L E P
Sbjct: 272 VPVEHEEGEEEEVGLELTLGFQPLVVRASRRPSSAEARCDLSGLSAESSRIGLRLELP 329
>12_02_0859 - 23751198-23753258
Length = 686
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 105 DLPSLPSLTSAAAGGLSTCS 164
D+PSLPSL AAGG + S
Sbjct: 265 DVPSLPSLPRPAAGGKNRTS 284
>12_02_0197 + 15392427-15392617,15392743-15393271
Length = 239
Score = 26.2 bits (55), Expect = 7.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 250 GGSCNDAASYCGIR 291
GG C D YCG+R
Sbjct: 83 GGGCGDRGRYCGVR 96
>10_08_0928 +
21617977-21618157,21618260-21618378,21618653-21618774,
21618853-21619049,21619350-21619603,21619779-21619880,
21619976-21620404,21620611-21621369,21621586-21621771
Length = 782
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 60 LRGHSATRLTGQVIRDLPSLPSLTSAAAGGLSTCSYP 170
+R TR + Q+ R +PS ++ + GGLS P
Sbjct: 140 IRKSKGTRTSSQICRSVPSFCAVYVVSKGGLSAVYSP 176
>10_08_0332 - 16843295-16843356,16843884-16846656
Length = 944
Score = 26.2 bits (55), Expect = 7.1
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 108 LPSLPSLTSAAAG--GLSTCSYPREPLKDILWCCSSWCPTGTMTGWSKTWWVVQ*RGV 275
LP L L +AAA L+ + P E + W S ++GWS+ V RGV
Sbjct: 6 LPLLIILVAAAAAIPALANAATPTEAEALLAWKASLQDDAAALSGWSRAAPVCAWRGV 63
>04_03_0819 +
20018496-20019487,20019587-20019721,20019834-20019978,
20020135-20020416,20020649-20020910,20021028-20021224,
20021315-20021425,20022341-20022392,20022442-20022584,
20023121-20023210,20023300-20023800,20024108-20024176,
20024866-20025011,20025475-20025530,20026140-20026286,
20027405-20027530,20027608-20027876,20028026-20028127
Length = 1274
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 223 PVGHHDEQHHRISLSGSLGYEHV-LRPPAAAEVKLGRLGR 107
P HD+ HH + G LGY H+ L PAA + L R R
Sbjct: 7 PENRHDD-HHPSTSGGGLGYFHLRLLCPAAPLLLLLRSDR 45
>04_03_0181 -
12327281-12328620,12330922-12331015,12331079-12331183,
12331404-12332592,12333268-12333461
Length = 973
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 344 AGRSNGKPMARRS-GXLRSRMPQYDAASLHDPPGLAPPGHRSSWTP*RTAP 195
+G S +P + + ++S AA+ PP LAPP S RTAP
Sbjct: 166 SGSSRTQPFPKPTLARVKSERATTAAAASPRPPALAPPASNSLKDMARTAP 216
>03_02_0341 - 7643426-7643973,7644340-7644505
Length = 237
Score = 26.2 bits (55), Expect = 7.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 271 PRHCTTHQVLLHPVIVPVGHHDEQH 197
P H H ++LHP ++ HD H
Sbjct: 159 PFHKHHHHIVLHPPVIVPPKHDHDH 183
>02_05_0490 +
29456825-29457499,29458771-29459057,29460922-29461039,
29461451-29461972,29462058-29462170,29463033-29463053,
29463726-29463960,29464218-29464381,29464695-29464776,
29465077-29465166,29465625-29465858,29466347-29466418,
29466857-29467000,29467573-29467659,29467940-29468098,
29469216-29469476,29469789-29469836
Length = 1103
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 211 GVQLER*PGGARPGGSCNDAASYCGIRDRK 300
G L R PG G+C+ A YCG+R R+
Sbjct: 155 GAALPRPPGA---NGTCDVAFCYCGVRLRR 181
>02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246
Length = 554
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 24 VVAVWTPQ*PFRLRGHSATRLTGQVIRDLPSLPSLTSAAA 143
VVA++TP + + S + G +I D+ S+ S+ +AAA
Sbjct: 345 VVAIFTPLLFYTVGFTSQKAILGSIITDVVSIVSVAAAAA 384
>02_02_0357 + 9360108-9360754,9363732-9364137
Length = 350
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 346 ARAXRTGSPWRAGPGTCGRGCR 281
A RTG+ WR GT GCR
Sbjct: 162 AHRRRTGAGWREYSGTNATGCR 183
>02_02_0355 + 9312814-9313650
Length = 278
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 346 ARAXRTGSPWRAGPGTCGRGCR 281
A RTG+ WR GT GCR
Sbjct: 182 AHRRRTGAGWREYSGTNATGCR 203
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 341 GRSNGKPMARRSGXLRSRMPQYDAASLHDPPGLAPPGHRSSWT 213
GR GK +R LRS +PQ+ S G P R T
Sbjct: 705 GRGRGKSAKKR---LRSALPQFHVGSTQGGDGFVRPNKRFKLT 744
>12_01_0294 +
2230539-2230870,2232179-2232574,2232676-2232834,
2233109-2233505
Length = 427
Score = 25.8 bits (54), Expect = 9.3
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +3
Query: 78 TRLTGQVIRDLPSLPSLTSAAAGGLSTCSYPREPLKDILWCCSSWCPTGTMTGWSK 245
T+L G I ++ + +L G LS P P CS WC G W++
Sbjct: 346 TKLVGLDILNVTQMTALRKD--GHLSVYLSPSGPASHHRQDCSHWCLPGVPDAWNE 399
>12_01_0008 + 63393-64004
Length = 203
Score = 25.8 bits (54), Expect = 9.3
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -3
Query: 247 VLLHPVIVPVGHHDEQHHRISLSGSLGYEHV 155
V +HP ++ + HH HH + + + H+
Sbjct: 100 VQVHPAVMQLHHHHHHHHPYAAAAAAQSHHL 130
>11_06_0269 - 21800104-21800655,21800824-21801370,21801398-21801513
Length = 404
Score = 25.8 bits (54), Expect = 9.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 238 GARPGGSCNDAASYC 282
G RPG C DA S+C
Sbjct: 159 GTRPGSVCKDAHSHC 173
>11_01_0009 + 67344-67955
Length = 203
Score = 25.8 bits (54), Expect = 9.3
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -3
Query: 247 VLLHPVIVPVGHHDEQHHRISLSGSLGYEHV 155
V +HP ++ + HH HH + + + H+
Sbjct: 100 VQVHPAVMQLHHHHHHHHPYAAAAAAQSHHL 130
>10_08_0744 + 20257486-20257700,20258217-20258385
Length = 127
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -1
Query: 147 HPQPQKSNSADSGDPGLPGLSAWLLNVLSNGTVTEES 37
+PQP+ ++ P G W N++SNG S
Sbjct: 10 NPQPESPSNQSRNGPTFQG--TWFKNIISNGAKPSSS 44
>09_02_0495 + 9880714-9881196
Length = 160
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -2
Query: 254 PPGLAPP-GHRSSWTP*RTAP*DILEWFPW 168
P APP G + P P IL WFPW
Sbjct: 88 PGAFAPPFGGGFPYGPAPPPPNPILPWFPW 117
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 111 PSLPSLTSAAAGGLSTCSYPREPLKD 188
P PS +S+AAGG ++ R PL++
Sbjct: 45 PPRPSASSSAAGGGGATTFTRLPLRN 70
>05_05_0302 - 23944802-23945857
Length = 351
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 84 LTGQVIRDLPSLPSLTSAAAGGLSTCSYPREPLKD 188
L +I+D P+L SL A G T S E LK+
Sbjct: 222 LLRSIIKDHPTLTSLVLTDADGQGTLSMGAEQLKE 256
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -2
Query: 344 AGRSNGKPMARRSGXLRSRMPQYDAASLHDPPGL 243
+GR + P+A+R+ L S+ P + PG+
Sbjct: 348 SGRQSNSPLAKRANLLESKSPDGVGQTFRAQPGV 381
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,950,048
Number of Sequences: 37544
Number of extensions: 298007
Number of successful extensions: 1095
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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