Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30404
(334 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 67 3e-12
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 57 3e-09
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 53 6e-08
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 53 6e-08
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 51 2e-07
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 42 1e-04
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 42 1e-04
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 37 0.003
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 37 0.003
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 32 0.087
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 32 0.087
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 0.46
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 0.46
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 29 0.61
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 29 0.61
Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical pr... 29 0.81
Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical pr... 29 0.81
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 28 1.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 27 3.3
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 27 4.3
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 27 4.3
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 27 4.3
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 27 4.3
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 27 4.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 27 4.3
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 27 4.3
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 27 4.3
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 27 4.3
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 27 4.3
Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z77667-5|CAE17886.1| 168|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 25 10.0
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 25 10.0
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 25 10.0
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 25 10.0
AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical ... 25 10.0
AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical ... 25 10.0
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 25 10.0
AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical ... 25 10.0
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 66.9 bits (156), Expect = 3e-12
Identities = 25/38 (65%), Positives = 35/38 (92%)
Frame = +2
Query: 2 CNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
C++ +KWLDSNQ A+KEE+EH+QK+LEG+ NPII+K+Y
Sbjct: 575 CDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 612
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 57.2 bits (132), Expect = 3e-09
Identities = 21/38 (55%), Positives = 32/38 (84%)
Frame = +2
Query: 2 CNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
C++ +KWLDSNQ A+KEE+E +QK+LEG+ P ++K+Y
Sbjct: 575 CDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLY 612
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 52.8 bits (121), Expect = 6e-08
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +2
Query: 5 NDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
++T++WLDSN LA+K+E E K KEL+ +C I+TKM+
Sbjct: 574 DETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMH 610
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 52.8 bits (121), Expect = 6e-08
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +2
Query: 5 NDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
++T++WLDSN LA+K+E E K KEL+ +C I+TKM+
Sbjct: 574 DETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMH 610
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 51.2 bits (117), Expect = 2e-07
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +2
Query: 8 DTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
DT++W++ N LADK+E E K KEL+ IC I+TKM+
Sbjct: 575 DTLRWMERNTLADKDEIEAKDKELKSICQDILTKMH 610
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 14 IKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 235 IEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 268
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 14 IKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 604 IEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 8 DTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
+ I WL SN A EE + ++K+LE PI++K+Y
Sbjct: 605 EAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLY 640
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 8 DTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
+ I WL SN A EE + ++K+LE PI++K+Y
Sbjct: 605 EAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLY 640
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.087
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 162 EHPEPEVPPPGLEALAPPSRRSIKPTF 242
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.087
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 162 EHPEPEVPPPGLEALAPPSRRSIKPTF 242
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 0.46
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 132 SPEVCRASRAEH-PEPEVPPPGLEALAPP 215
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 0.46
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 132 SPEVCRASRAEH-PEPEVPPPGLEALAPP 215
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 29.5 bits (63), Expect = 0.61
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 150 ASRAEHPEPEVPPPGLEALAPPSRR 224
A+R P+P+ PPP L PP RR
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRR 702
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 29.5 bits (63), Expect = 0.61
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 150 ASRAEHPEPEVPPPGLEALAPPSRR 224
A+R P+P+ PPP L PP RR
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRR 702
>Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5b protein.
Length = 212
Score = 29.1 bits (62), Expect = 0.81
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +3
Query: 30 PTNWPTRRSMSTSRKNWKAFAIR**RRCTXVP--EESPEVCRASRAEHPEPEVPPPGLEA 203
P+ W R+ S K W+ R RR P E SP+V RA R PPP +
Sbjct: 32 PSGWT--RASELSEKGWRELLDR--RRSQSPPPREPSPDVRRAIR------RTPPPRVNR 81
Query: 204 LAP---PSRRSIK 233
+AP P RR ++
Sbjct: 82 VAPIRLPERRPLR 94
>Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5a protein.
Length = 212
Score = 29.1 bits (62), Expect = 0.81
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +3
Query: 30 PTNWPTRRSMSTSRKNWKAFAIR**RRCTXVP--EESPEVCRASRAEHPEPEVPPPGLEA 203
P+ W R+ S K W+ R RR P E SP+V RA R PPP +
Sbjct: 32 PSGWT--RASELSEKGWRELLDR--RRSQSPPPREPSPDVRRAIR------RTPPPRVNR 81
Query: 204 LAP---PSRRSIK 233
+AP P RR ++
Sbjct: 82 VAPIRLPERRPLR 94
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 123 PEESPEVCRASRAEHPEPE---VPPPGLEALAPPSRRSI 230
P SP ++ HP P + PPGLE L+ R+ I
Sbjct: 1411 PSRSPSFVNPQQSFHPIPSFEPIVPPGLEDLSEEERQKI 1449
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 123 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIK 233
P P + +A P P PPP L+A PP +K
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLK 107
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 123 PEESPEVCRASRAEHPEPEVPPPGLEALAPP 215
P SP+ S++ P P +PP + PP
Sbjct: 476 PSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 506
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 110 SSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 9
S L S C+P++S + P V T WC
Sbjct: 295 SRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 328
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 110 SSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 9
S L S C+P++S + P V T WC
Sbjct: 321 SRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 354
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 110 SSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 9
S L S C+P++S + P V T WC
Sbjct: 295 SRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 328
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 110 SSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 9
S L S C+P++S + P V T WC
Sbjct: 321 SRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 354
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 110 SSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 9
S L S C+P++S + P V T WC
Sbjct: 162 SRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 195
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 123 PEESPEVCRASRAEHPEPEVPPPGLEALAPP 215
P SP+ S++ P P +PP + PP
Sbjct: 483 PSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 513
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 110 SSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 9
S L S C+P++S + P V T WC
Sbjct: 295 SRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 328
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 110 SSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 9
S L S C+P++S + P V T WC
Sbjct: 321 SRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 354
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 168 PEPEVPPPGLEALAPPSRRSIKPT 239
P + PPPG++ +P +R+ PT
Sbjct: 228 PMNDSPPPGMQQQSPERQRAFSPT 251
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 26.6 bits (56), Expect = 4.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 120 VPEESPEV-CRASRAEHPEPEVPPPGLEALAPP-SRRSIKPT 239
+P SP A+R + PE +P P A +PP SRRS+ T
Sbjct: 342 LPRNSPAANATAAREDAPEASIPAP---APSPPASRRSVSRT 380
>Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical
protein W07G1.3 protein.
Length = 307
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 147 RASRAEHPEPEVPPPGLEALAPPSRRSIKPTF 242
R + PEP VPP APP+ S+ P F
Sbjct: 23 RKRSSSKPEPPVPP----KFAPPAAPSVAPNF 50
>Z77667-5|CAE17886.1| 168|Caenorhabditis elegans Hypothetical
protein M04B2.7 protein.
Length = 168
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1
Query: 313 FDIYLFQSRRGYKVVVTGRLRVVWNVGLIDLL 218
FD+ FQS VV GRL VV + LI LL
Sbjct: 4 FDVRKFQSSHRDFVVNDGRLHVVSDYSLIALL 35
>Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical
protein T04F8.6 protein.
Length = 766
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 5 NDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKM 112
N I+ LD NQ + + Y ++ KE+E C I M
Sbjct: 290 NMLIEELDQNQQSIEASYNNRLKEMEERCRGRIAAM 325
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 120 VPEESPEVCRASRAEHPEPEVPP---PGLEALAPPSRR 224
VP+E+P++ + + +P PP PG A PP R
Sbjct: 791 VPDETPKLIPLEKLKKEDPLPPPANRPGGRAALPPHIR 828
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 126 EESPEVCRASRAEHPEPEVPPPGLEALAP 212
+++P+V +A + E PE +VP P EA P
Sbjct: 748 DDAPKVKKAKKEEVPEEKVPVP--EAAGP 774
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 126 EESPEVCRASRAEHPEPEVPPPGLEALAP 212
+++P+V +A + E PE +VP P EA P
Sbjct: 761 DDAPKVKKAKKEEVPEEKVPVP--EAAGP 787
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 25.4 bits (53), Expect = 10.0
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 105 RRCTXV--PEESPEVCRASRAEHPEPEVP 185
RR T V PEE+P + R R P PE P
Sbjct: 565 RRETFVEKPEEAPRINRLGRRWQPPPERP 593
>AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical
protein Y42G9A.4c protein.
Length = 484
Score = 25.4 bits (53), Expect = 10.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 159 AEHPEPEVPPPGLEALAPPSRR 224
AE+P E PP LE L P +R+
Sbjct: 82 AEYPIEEDQPPSLEILVPIARK 103
>AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical
protein Y42G9A.4b protein.
Length = 614
Score = 25.4 bits (53), Expect = 10.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 159 AEHPEPEVPPPGLEALAPPSRR 224
AE+P E PP LE L P +R+
Sbjct: 212 AEYPIEEDQPPSLEILVPIARK 233
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 25.4 bits (53), Expect = 10.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 159 AEHPEPEVPPPGLEALAPPSRR 224
AE+P E PP LE L P +R+
Sbjct: 112 AEYPIEEDQPPSLEILVPIARK 133
>AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical
protein Y42G9A.4d protein.
Length = 514
Score = 25.4 bits (53), Expect = 10.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 159 AEHPEPEVPPPGLEALAPPSRR 224
AE+P E PP LE L P +R+
Sbjct: 112 AEYPIEEDQPPSLEILVPIARK 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,717,636
Number of Sequences: 27780
Number of extensions: 123140
Number of successful extensions: 608
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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