Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30404
(334 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 62 9e-11
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 57 3e-09
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 57 3e-09
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 57 3e-09
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 56 4e-09
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 55 1e-08
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 54 2e-08
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 54 2e-08
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 54 2e-08
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 44 3e-05
At1g79350.1 68414.m09247 DNA-binding protein, putative contains ... 31 0.19
At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing ... 29 0.77
At1g04930.1 68414.m00490 hydroxyproline-rich glycoprotein family... 29 1.0
At1g70250.1 68414.m08082 receptor serine/threonine kinase, putat... 27 2.4
At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein ... 27 3.1
At3g29390.1 68416.m03693 hydroxyproline-rich glycoprotein family... 27 4.1
At3g16565.1 68416.m02118 alanyl-tRNA synthetase-related low simi... 27 4.1
At1g48100.1 68414.m05368 glycoside hydrolase family 28 protein /... 27 4.1
At1g27750.1 68414.m03391 ubiquitin system component Cue domain-c... 27 4.1
At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family... 27 4.1
At5g65630.1 68418.m08256 DNA-binding bromodomain-containing prot... 26 5.5
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 26 5.5
At4g28990.1 68417.m04143 RNA-binding protein-related contains we... 26 5.5
At4g14340.1 68417.m02208 casein kinase I (CKI1) identical to cas... 26 5.5
At3g07540.1 68416.m00900 formin homology 2 domain-containing pro... 26 5.5
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 26 5.5
At1g61080.1 68414.m06877 proline-rich family protein 26 5.5
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 26 7.2
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 26 7.2
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 26 7.2
At4g14650.1 68417.m02253 expressed protein 26 7.2
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 26 7.2
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 26 7.2
At1g24220.1 68414.m03054 paired amphipathic helix repeat-contain... 26 7.2
At4g23300.1 68417.m03358 protein kinase family protein contains ... 25 9.5
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 25 9.5
At3g03776.1 68416.m00385 hydroxyproline-rich glycoprotein family... 25 9.5
At2g37870.1 68415.m04649 protease inhibitor/seed storage/lipid t... 25 9.5
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 25 9.5
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 25 9.5
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 62.1 bits (144), Expect = 9e-11
Identities = 24/37 (64%), Positives = 34/37 (91%)
Frame = +2
Query: 5 NDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
++TI+W++ NQLA+ +E+E+K KELEGICNPII+KMY
Sbjct: 580 DETIEWIEGNQLAEVDEFEYKLKELEGICNPIISKMY 616
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 57.2 bits (132), Expect = 3e-09
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +2
Query: 8 DTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
+ I+WLD NQL + +E+E K KELE +CNPII KMY
Sbjct: 582 EAIQWLDGNQLGEADEFEDKMKELESVCNPIIAKMY 617
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 56.8 bits (131), Expect = 3e-09
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2
Query: 14 IKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
I+WL+ NQLA+ +E+E K KELE ICNPII KMY
Sbjct: 584 IQWLEGNQLAEADEFEDKMKELESICNPIIAKMY 617
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 56.8 bits (131), Expect = 3e-09
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +2
Query: 5 NDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
+ I+WLD NQLA+ +E+E K KELE +CNPII +MY
Sbjct: 581 DQAIEWLDGNQLAEADEFEDKMKELESLCNPIIARMY 617
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 56.4 bits (130), Expect = 4e-09
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +2
Query: 14 IKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
I+WL++NQLA+ +E+E K KELE ICNPII KMY
Sbjct: 584 IEWLEANQLAECDEFEDKMKELESICNPIIAKMY 617
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 54.8 bits (126), Expect = 1e-08
Identities = 22/36 (61%), Positives = 29/36 (80%)
Frame = +2
Query: 8 DTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
+ I+WLD NQLA+ +E+EHK KELE + + IITKMY
Sbjct: 580 EVIQWLDDNQLAEADEFEHKMKELESVWSTIITKMY 615
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 54.4 bits (125), Expect = 2e-08
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +2
Query: 8 DTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
+ ++WLD NQ ++KEEY+ K KE+E +CNPIIT +Y
Sbjct: 553 EALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVY 588
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 54.4 bits (125), Expect = 2e-08
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +2
Query: 8 DTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
+ ++WLD NQ ++KEEY+ K KE+E +CNPIIT +Y
Sbjct: 608 EALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVY 643
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 54.4 bits (125), Expect = 2e-08
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +2
Query: 8 DTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
+ ++WLD NQ ++KEEY+ K KE+E +CNPIIT +Y
Sbjct: 608 EALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVY 643
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 44.0 bits (99), Expect = 3e-05
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +2
Query: 8 DTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 115
+ ++WL+ N A+KE+Y+ K KE+E +C+P+I +Y
Sbjct: 622 EALEWLEENVNAEKEDYDEKLKEVELVCDPVIKSVY 657
>At1g79350.1 68414.m09247 DNA-binding protein, putative contains
Pfam PF00628: PHD-finger domain; contains TIGRFAMS
TIGR01053: zinc finger domain, LSD1 subclass; contains
Pfam PF00271: Helicase conserved C-terminal domain;
similar to WSSV086 (GI:19481678)[shrimp white spot
syndrome virus]; similar to nuclear protein Np95
(GI:17939938) [Mus musculus]
Length = 1299
Score = 31.1 bits (67), Expect = 0.19
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 135 PEVCRASRAEHPE-PEVPPPGLEALAPPSRRSIKP 236
PE+ +R + P+ P+ PP ++ L PP ++ +KP
Sbjct: 61 PELLSRARPQFPQSPQQPPQPIQTLPPPIQQQLKP 95
>At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing
protein
Length = 809
Score = 29.1 bits (62), Expect = 0.77
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 123 PEESPEVCRASRAEHPEPEVPPPG-LEALAPPSRRSIKP 236
P S + SR P P +PPP L PP+R P
Sbjct: 524 PSSSAKRASGSRGRRPRPPLPPPARARPLPPPARARPMP 562
>At1g04930.1 68414.m00490 hydroxyproline-rich glycoprotein family
protein Common family member: At2g32840 [Arabidopsis
thaliana]
Length = 332
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 168 PEPEVPPPGLEALAPPSRRSIKPTFH 245
P P PPP L PP+ R I P H
Sbjct: 34 PPPSQPPPAPPPLPPPTYRPIAPLRH 59
>At1g70250.1 68414.m08082 receptor serine/threonine kinase, putative
similar to to receptor serine/threonine kinase PR5K
gi|1235680|gb|AAC49208
Length = 799
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 144 CRASRAEHPEPEV-PPPGLEALAPPSRRSIKP 236
C S A P P++ PPP + L PP S P
Sbjct: 95 CSGSGAPPPPPDLFPPPSAQMLPPPPASSPAP 126
>At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein
similar to SP|Q01205 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Rattus norvegicus}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 464
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 123 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIK 233
P E P+V AE P+ PPP PPS++S K
Sbjct: 194 PAEKPKVESTKVAEKPKAPSPPP-----PPPSKQSAK 225
>At3g29390.1 68416.m03693 hydroxyproline-rich glycoprotein family
protein sequencing discrepancy between cDNA and genomic
sequence prevents representation of entire coding
sequence
Length = 578
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 132 SPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKP 236
+P R P +PPP + +APP +++ P
Sbjct: 463 TPSANRVRSPPSPRSVMPPPPPKTIAPPPSKTMSP 497
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 132 SPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKP 236
SP R+ P + PP + ++PPS +S+ P
Sbjct: 471 SPPSPRSVMPPPPPKTIAPPPSKTMSPPSSKSMLP 505
>At3g16565.1 68416.m02118 alanyl-tRNA synthetase-related low
similarity to SP|Q56273 Alanyl-tRNA synthetase (EC
6.1.1.7) (Alanine--tRNA ligase) (AlaRS) {Thiobacillus
ferrooxidans}
Length = 271
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 47 KEEYEHKQKELEGICNPIITK 109
+EE++ KQKELE N +I+K
Sbjct: 172 QEEFQVKQKELEAEANELISK 192
>At1g48100.1 68414.m05368 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from
[Glycine max]; contains PF00295: Glycosyl hydrolases
family 28 (polygalacturonases)
Length = 475
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 165 HPEPEVPPPGLEALAPPSR 221
HP P PPP LE PP +
Sbjct: 40 HPLPPPPPPPLETANPPDQ 58
>At1g27750.1 68414.m03391 ubiquitin system component Cue
domain-containing protein very low similarity to ASC-1
complex subunit P100 [Homo sapiens] GI:12061187;
contains Pfam profile PF02845: CUE domain
Length = 1973
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 135 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKP 236
P + S+ P PE+ PP +AL PP S P
Sbjct: 861 PPLQPQSQPPEPPPEMMPPPPQALPPPLPHSHPP 894
>At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 554
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 120 VPEESPEVCRASRAEHPEPEVPPPGLEALAPP 215
+P E P A + + P PPPG AL PP
Sbjct: 205 IPVEPPLTMSAEKESYA-PLPPPPGRAALPPP 235
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 135 PEVCRASRAEHPEPEVPPPGLEALAPP 215
P + A R P +PPPG AL PP
Sbjct: 236 PPLPMAVRKGVAAPPLPPPGTAALPPP 262
>At5g65630.1 68418.m08256 DNA-binding bromodomain-containing protein
similar to 5.9 kb fsh membrane protein [Drosophila
melanogaster] GI:157455; contains Pfam profile PF00439:
Bromodomain
Length = 590
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 123 PEESPEVCRASRAEHPEPEVPPPGLEALAP 212
P P++ SR + P P PPP ++ P
Sbjct: 332 PTLPPQLVEPSRVQSPSPPPPPPVIQPELP 361
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 120 VPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKP 236
+P ESP P P PP L PPS + P
Sbjct: 1128 LPHESPPSPPPQPPSSPPPPSSPPQLAPAPPPSDHCLPP 1166
>At4g28990.1 68417.m04143 RNA-binding protein-related contains weak
similarity to Swiss-Prot:Q01844 RNA-binding protein EWS
(EWS oncogene)(Ewing sarcoma breakpoint region 1
protein) [Homo sapiens]
Length = 347
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 141 VCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFH 245
V R P +VPPP L PPS R P H
Sbjct: 285 VLRERSRSPPLRDVPPPPLRDGPPPSLRGGGPPLH 319
>At4g14340.1 68417.m02208 casein kinase I (CKI1) identical to casein
kinase I [Arabidopsis thaliana] gi|1103318|emb|CAA55395
Length = 457
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 135 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 239
P++ +SR P P P P L+ PP+ R+ KPT
Sbjct: 302 PQIGSSSR---PRP-TPRPALDPPGPPAERAEKPT 332
>At3g07540.1 68416.m00900 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 841
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 129 ESPEVCRASRAEHPEPEVPPPGLEALAPPSRRS 227
E P+ C + P+P++ P + + P SRR+
Sbjct: 462 ELPQSCGEGTTDRPKPKLKPLPWDKVRPSSRRT 494
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 135 PEVCRASRAEHPEPEVPPPGLEALAPP 215
PE R E P P PPP L L PP
Sbjct: 65 PEPPLPPRFELPPPLFPPPPLPRLPPP 91
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 159 AEHPEPEVPPPGLEALAPP 215
A P P PPPG +A PP
Sbjct: 546 AAAPPPPPPPPGTQAAPPP 564
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 123 PEESPEVCRASRAEHPEPEVPPPGLEALAPP 215
P P RA+ A P P PPPG A PP
Sbjct: 523 PPPPPPPPRAAVAPPPPP--PPPGTAAAPPP 551
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 120 VPEESPEVCRAS--RAEHPEPEVPPPGLEALAPPSR 221
+P E P+ + S +A P P VP P + + A P R
Sbjct: 352 LPPEPPKFLKVSSKKASAPPPPVPAPQMPSSAGPPR 387
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 123 PEESPEVCRASRAEHPEPEVPPPGLEALAPP 215
P +P++ ++ P P PPPG PP
Sbjct: 373 PVPAPQMPSSAGPPRPPPPAPPPGSGGPKPP 403
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 120 VPEESPEVCRAS--RAEHPEPEVPPPGLEALAPPSR 221
+P E P+ + S +A P P VP P + + A P R
Sbjct: 352 LPPEPPKFLKVSSKKASAPPPPVPAPQMPSSAGPPR 387
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 123 PEESPEVCRASRAEHPEPEVPPPGLEALAPP 215
P +P++ ++ P P PPPG PP
Sbjct: 373 PVPAPQMPSSAGPPRPPPPAPPPGSGGPKPP 403
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 7/33 (21%)
Frame = +3
Query: 114 TXVPEESPEVC-------RASRAEHPEPEVPPP 191
T PE PE+C R S+ P+P PPP
Sbjct: 156 TFRPENQPEICSQKPINLRGSKPLLPDPSFPPP 188
>At4g14650.1 68417.m02253 expressed protein
Length = 644
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 161 RPGSPAYLRGLLRHXGTSSLLSDCKC 84
+ SP ++G++R SSLL C C
Sbjct: 613 KKASPDSMKGIVRKRSKSSLLGTCLC 638
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +3
Query: 111 CTXVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 239
C P S HP P PP G +PP R + T
Sbjct: 107 CGSPPSHPSTPSHPSTPSHPTPSHPPSGGYYSSPPPRTPVVVT 149
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +3
Query: 111 CTXVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 239
C P S HP P PP G +PP R + T
Sbjct: 107 CGSPPSHPSTPSHPSTPSHPTPSHPPSGGYYSSPPPRTPVVVT 149
>At1g24220.1 68414.m03054 paired amphipathic helix repeat-containing
protein weak similarity to transcription co-repressor
Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 744
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 150 ASRAEHPEPEVPPPGLEALAPPSRRSIKP 236
ASR P+ +PP ++P + R+I P
Sbjct: 580 ASRTIPPKATIPPKSSRTISPKANRTIPP 608
>At4g23300.1 68417.m03358 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 660
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 123 PEESPEVCR-ASRAEHPEPEVPPPGLEALAPPSRRSIKP 236
PE+ P++ S VP PG+ P SRR + P
Sbjct: 614 PEDRPKLSTIVSMLTSNTISVPAPGIPGFFPQSRRELDP 652
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +3
Query: 120 VPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 239
VP +P V P P PPP + PS + PT
Sbjct: 162 VPSPTPPVPTDPMPSPPPPVSPPPPTPTPSVPSPPDVTPT 201
>At3g03776.1 68416.m00385 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 177
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 156 RAEHPEPEVPPPGLEALAPPSRRSIKPT 239
R HP+P PPP P +S PT
Sbjct: 132 RQVHPQPPAPPPYKFHQKEPVAKSFPPT 159
>At2g37870.1 68415.m04649 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 115
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 140 LRGLLRHXGTSSLLSDCKCLPILSACAHTPPCRPVGWNP 24
L LL + +C +PI A A PC P NP
Sbjct: 11 LMSLLISLASVEAAGECGRMPINQAAASLSPCLPATKNP 49
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 162 EHPEPE-VPPPGLEALAPPSRRSIKPT 239
E P PE +PPP E+ +PPS P+
Sbjct: 150 ESPPPESLPPPSPESPSPPSPEPPPPS 176
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 123 PEESPEVCRASRAEHPEPEVP--PPGLEALAPPS 218
PE+SP+ + E P+PE P P + ++PP+
Sbjct: 468 PEDSPKPEQPKPEESPKPEQPQIPEPTKPVSPPN 501
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,390,785
Number of Sequences: 28952
Number of extensions: 115870
Number of successful extensions: 603
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 390583752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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