Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30403
(575 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 79 6e-16
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 37 0.002
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 35 0.007
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 31 0.16
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 29 0.37
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.37
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 29 0.49
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 29 0.49
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 29 0.64
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 28 1.1
SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyce... 27 1.5
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 27 1.5
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 27 2.0
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 27 2.6
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 27 2.6
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 26 3.4
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 26 4.5
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 26 4.5
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 25 6.0
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 7.9
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 25 7.9
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 78.6 bits (185), Expect = 6e-16
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +1
Query: 241 LHQQDFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARG-MLPDPKNTPIVISWAIAQ 417
++++ ++SDGL GLYRGFG SV GI++YR YFG YDT + +L P + S+ +
Sbjct: 181 VYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLEGNFLASFLLGW 240
Query: 418 TVTTVAGIISYPFDTVR 468
VTT +G+ SYP DT+R
Sbjct: 241 AVTTGSGVASYPLDTIR 257
Score = 73.3 bits (172), Expect = 2e-14
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 RYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFART 181
RYFPTQALNFAFKDK+K++F G ++ + ++F SL FVY LD+ART
Sbjct: 100 RYFPTQALNFAFKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYART 158
Query: 182 RLAADV--GKGDGQREFSGL 235
RLA D K G+R+F+GL
Sbjct: 159 RLANDAKSAKKGGERQFNGL 178
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 36.7 bits (81), Expect = 0.002
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 259 KSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML-PDPKNTPIVISWAIAQTVTTVA 435
K + ++ LY GF ++ +++ A YFG R L P + + IA T+ +
Sbjct: 153 KQERILALYNGFEATMWRHVVWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIF 212
Query: 436 G-IISYPFDTVRS 471
G +S PFD ++S
Sbjct: 213 GTFLSTPFDVIKS 225
Score = 29.5 bits (63), Expect = 0.37
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 155 VYPLDFARTRLAADVGKGDGQREFSGLGNCISK 253
+YPLD +TR+ VGK D ++G +C+ K
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKK 54
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 35.1 bits (77), Expect = 0.007
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 259 KSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTV-TTVA 435
+S+GL G YRG+ + V + S++ Y+ ++ L N I + I + T VA
Sbjct: 128 RSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISVIAPICSALGTVVA 187
Query: 436 GIISYPFDTVRS 471
IS P D V++
Sbjct: 188 TTISTPLDIVKT 199
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 30.7 bits (66), Expect = 0.16
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 256 FKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 351
+KS+GL+GL+RGFG + + F FY+
Sbjct: 292 YKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 29.5 bits (63), Expect = 0.37
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -1
Query: 233 DRRIHAGHLPYRHRRRDGYVRSRGGTRSTERWL-RRHHRRPD--YQRSNARTASSCQHRR 63
D RIH R R Y +R RS+ R R +HRR D Y RSN R +HRR
Sbjct: 312 DSRIHVDFSQSVARYRQYYNSNRDRKRSSSRSDDREYHRRSDGRYDRSNYR--DDYRHRR 369
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.5 bits (63), Expect = 0.37
Identities = 16/79 (20%), Positives = 38/79 (48%)
Frame = +1
Query: 235 RKLHQQDFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIA 414
R + ++ + +G+ L+RG V+ ++Y A+ F + + + + +++
Sbjct: 52 RPVFKETVQKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKHLTENLAMNDHAVNFLCG 111
Query: 415 QTVTTVAGIISYPFDTVRS 471
+ A + SYP DT+R+
Sbjct: 112 TSAGIFATLTSYPLDTMRT 130
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 29.1 bits (62), Expect = 0.49
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -1
Query: 221 HAGHLPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRR 63
H P R R RD RS +RS R HR DY RS ++ + RR
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRR 189
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 29.1 bits (62), Expect = 0.49
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 235 RKLHQQDFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 360
R Q K++GL GLYRG + + + R+ F YD+ +
Sbjct: 54 RSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 28.7 bits (61), Expect = 0.64
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Frame = +1
Query: 259 KSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR-----GMLPDPKNTPIVISWAIAQTV 423
+ +G+ GL RG G + I GFY+ R L DPK + I+ A
Sbjct: 79 RHEGIRGLQRGLGTAYVYQICLNGCRLGFYEPIRRTLNTWFLDDPKGNKLAINVASGAGS 138
Query: 424 TTVAGIISYPFDTVRS 471
+ PF V++
Sbjct: 139 GLCGALFGSPFFLVKT 154
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 256 FKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 360
+K +G+ G +RGFGV+ + Y FY+ ++
Sbjct: 152 WKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSK 186
>SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1297
Score = 27.5 bits (58), Expect = 1.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 479 DAVWSCQERYLYKNTIHCWATIAK 550
D + CQ R Y N I CW+ I +
Sbjct: 673 DVILLCQNRRSYMNDIPCWSRIRR 696
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 256 FKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 351
+KS G+ G YRG V + G+ Y A+ G ++
Sbjct: 279 YKSVGIRGYYRGVLVGILGMFPYSATDLGTFE 310
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 235 RKLHQQDFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 369
RK+ ++ +K +G+ G +G G+ V + + Y G Y+ + L
Sbjct: 203 RKVVRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYEHVKSHL 247
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 2.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 271 LIGLYRGFGVSVQGIIIYRASYFGFYDTA 357
+ YRGF V++ GI Y F YD A
Sbjct: 184 ICNFYRGFSVTLTGIFPYAGMSFLAYDLA 212
Score = 25.4 bits (53), Expect = 6.0
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +2
Query: 2 RYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFART 181
R FP + F ++ ++V + + +T R+ S+ F YPL+ R
Sbjct: 88 RVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFLSGSLAGTC-----SVFFTYPLELIRV 142
Query: 182 RLA 190
RLA
Sbjct: 143 RLA 145
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 26.6 bits (56), Expect = 2.6
Identities = 15/69 (21%), Positives = 31/69 (44%)
Frame = +1
Query: 262 SDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGI 441
++G+ L+RG + G A YF + + + + P+ + A A + T++
Sbjct: 71 TEGVYSLWRGISSVIMGAGPSHAIYFSVLEFFKSKINASPDRPLASALAGACAI-TISDA 129
Query: 442 ISYPFDTVR 468
PFD ++
Sbjct: 130 FMTPFDVIK 138
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 256 FKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD 375
+K++G+ G +RG+ ++ II + + Y+T ML D
Sbjct: 277 YKTEGINGFFRGYSSNMLKIIPVMSITWYTYETVSKMLHD 316
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 361 GMLPDPKNTPIVISWAIAQTVTTV 432
GMLPDPK+ P++ +T V
Sbjct: 89 GMLPDPKSIPVISQALTKYKITDV 112
>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 4.5
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 295 GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG 438
G+ + G+I+ + Y+T R M+P P +S + T+ G
Sbjct: 12 GIPICGVILLILWGYSLYNTLRFMVPGKATEPFTLSLSDVSDDTSAPG 59
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 266 SDLKSC*CSFRDRRIHAGHLPYRHRRRDGYVRSR 165
+D C S +H G++ +H R D Y+ S+
Sbjct: 335 NDTCECIFSLLAALLHIGNIEVKHSRNDAYIDSK 368
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.0 bits (52), Expect = 7.9
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +3
Query: 297 CVRARYHHLPCXILRF-LRHGP 359
C+ R HHL C R L+ GP
Sbjct: 98 CINCRKHHLDCNFTRTPLKRGP 119
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.0 bits (52), Expect = 7.9
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = +1
Query: 223 ILRSRKLHQQDFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD-----PKNT 387
IL++ K+H+ G L+RG G ++ G I R+ F Y + +L D +N+
Sbjct: 109 ILKNVKVHE------GTRALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQENS 162
Query: 388 PI-VISWAIAQTVTTVA 435
I +++ AIA +T+ A
Sbjct: 163 QIHLMAAAIAGVITSAA 179
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,055,281
Number of Sequences: 5004
Number of extensions: 37114
Number of successful extensions: 132
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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