Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30399
         (467 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   5.3  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.0  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   7.0  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           22   9.3  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -2

Query: 406 SAMEIIPELESVPFLYMAPRQYSSGSS 326
           + + ++  + SVP+++ A  QYS  S+
Sbjct: 160 ACLTMVGSVHSVPYIFYAGTQYSERSN 186


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 309  ECPE*TPYFHSRLYLSIATSI 247
            +C   T  FH+ LY +IAT I
Sbjct: 1228 QCGTATSLFHASLYSTIATFI 1248


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 355 APRQYSSGSSAKTKSGVS 302
           APR  SS SS+ TK+G +
Sbjct: 446 APRGSSSSSSSATKAGAA 463


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 368 RYRL*FGNYLHCACMLRTI 424
           +YR+  GN +  AC LRT+
Sbjct: 56  KYRILPGNEVDLACNLRTV 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,622
Number of Sequences: 2352
Number of extensions: 10244
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)