Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30395
         (436 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2J4M5 Cluster: Nucleoside phosphorylase-like; n=3; Fra...    33   2.6  
UniRef50_Q9NKU7 Cluster: Putative uncharacterized protein; n=3; ...    32   6.0  
UniRef50_Q7QP02 Cluster: GLP_244_16200_12619; n=1; Giardia lambl...    32   6.0  
UniRef50_Q4Q4S9 Cluster: Putative uncharacterized protein; n=3; ...    31   8.0  

>UniRef50_Q2J4M5 Cluster: Nucleoside phosphorylase-like; n=3;
           Frankia|Rep: Nucleoside phosphorylase-like - Frankia sp.
           (strain CcI3)
          Length = 387

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = +3

Query: 309 GATTAPVLPRSTATPFEWXNSYTTQSTLRPHVSRR 413
           G T  PV P S  +P EW     T STL P+V RR
Sbjct: 78  GRTRTPVGPGSLVSP-EWDRQLLTTSTLGPYVGRR 111


>UniRef50_Q9NKU7 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1009

 Score = 31.9 bits (69), Expect = 6.0
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = -2

Query: 279 YDTNGERRVMLSPGQHRTASTIQAYFILASNDVIRK---TSCSAETLLFLGFSAIIKCLV 109
           YDT G R +  +  QHR  +  +  F    ND +R+    SC  E   +    A+I    
Sbjct: 40  YDTMGRRNLASAAEQHRGRTAAERLF--RENDAVRRRQFPSCFEEACAYGNLQAVILMWA 97

Query: 108 KCSVD*ASRQ 79
           + +VD  +RQ
Sbjct: 98  QGAVDIPTRQ 107


>UniRef50_Q7QP02 Cluster: GLP_244_16200_12619; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_244_16200_12619 - Giardia lamblia
           ATCC 50803
          Length = 1193

 Score = 31.9 bits (69), Expect = 6.0
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +3

Query: 24  HTTVLSDPRKPSLIPVIASADSLNRPNT*PDTLLSPRIPRTIKSRR 161
           HTTVLS     S  P ++S   L+RPN+   T++ P +  T  + R
Sbjct: 130 HTTVLSSLMDISETPAVSSTTQLSRPNSAQSTMV-PEVTMTFATAR 174


>UniRef50_Q4Q4S9 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 807

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 328 TGAVVAPYSDVSSGRALRHQRRETGDAKSRPTSHSQYNPSLLY 200
           T AVVAP S  ++G A   +  +    + R  S  +YNP L +
Sbjct: 384 TAAVVAPVSSATAGAAAGSKAAKQSTQQDREASWRRYNPQLTF 426


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,568,744
Number of Sequences: 1657284
Number of extensions: 9481741
Number of successful extensions: 26911
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26904
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)